Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Vps4a
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name vacuolar protein sorting 4A
Also known as 4930589C15Rik
Coordinate chr8:107757901-107772392
Strand +
Gene summary Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and protein C-terminus binding activity. Involved in late endosomal microautophagy; multivesicular body assembly; and viral budding from plasma membrane. Located in perinuclear region of cytoplasm. Is expressed in several structures, including aorta; genitourinary system; gut gland; nervous system; and trachea. Orthologous to human VPS4A (vacuolar protein sorting 4 homolog A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vps4a

Retroname Coord Strand Genomic Region ENSG
Vps4aP1 chr13:76844635-76846347 + Intragenic
 ENSMUSG00000090027 UCSC

Expression

Transcript Sequences

>NM_126165.2
GCCGCGTGACTCGGGCTGGGCCGCTCTGGGCCGCGCTCCTCGTTCACCCTCGGACTCGGCTCCCACTGCTAGTGGCAGCTCTGCCCGCGCCGAGAGCCGACCTGCCGGGCTCCTAAGCGGCGGACCCACCACCTCGGCTCCTCCGAGCCGGACCGAGGCCGCAAGCAGCACCGCGGGGTGTGGGGCGGACCCAGGATATGAAATGACAACGTCAACCCTCCAGAAAGCCATCGATCTGGTGACAAAAGCCACAGAAGAGGATAAAGCCAAGAACTACGAGGAGGCACTCCGTCTCTACCAGCATGCTGTGGAGTATTTCCTCCACGCCATCAAATATGAAGCACACAGTGACAAGGCCAAGGAGAGCATTCGAGCAAAGTGCATGCAGTACCTAGACAGAGCGGAGAAGCTGAAGGATTATTTACGAAACAAAGAGAAACATGGCAAGAAGCCAGTCAAAGAGAACCAGAGTGAAGGCAAGGGtagtgacagtgacagtgaagGGGATAATCCAGAGAAAAAGAAGTTACAAGAACAATTGATGGGTGCTGTTGTGATGGAGAAGCCGAACATACGGTGGAATGATGTAGCTGGACTGGAGGGGGCTAAAGAGGCTCTCAAAGAAGCTGTGATTTTGCCAATTAAATTCCCACACTTATTCACAGGCAAACGCACTCCTTGGCGAGGCATACTCCTCTTTGGGCCCCCAGGCACAGGCAAGTCCTACCTGGCCAAAGCCGTGGCAACAGAAGCCAACAACTCTACCTTCTTCTCTGTGTCCTCCTCGGATCTGATGTCTAAGTGGTTGGGGGAAAGCGAGAAGCTAGTCAAGAACCTGTTTGAGCTGGCCCGGCAGCATAAGCCTTCCATCATCTTCATTGATGAGGTAGATTCCCTCTGTGGGTCACGGAATGAAAATGAGAGTGAAGCCGCTCGTAGGATCAAAACAGAGTTCTTGGTCCAGATGCAAGGAGTGGGGAATAATAATGATGGAACTCTTGTTCTTGGTGCCACAAACATCCCCTGGGTGTTGGATTCAGCCATCAGGAGGAGGTTTGAAAAGCGAATTTATATCCCATTGCCAGAGGAAGCGGCCCGTGCCCAAATGTTTCGGTTACATCTGGGAAGCACACCTCACAACCTCACAGATGCTAACATTCACGAGCTGGCCCGCAAGACAGAAGGCTACTCAGGAGCAGATATCAGCATCATTGTGCGGGACTCCCTCATGCAGCCAGTCAGAAAAGTACAGTCAGCAACACACTTCAAGAAGGTGTGTGGCCCTTCTCGAACCAACCCTAGCGTTATGATTGATGATCTTCTGACCCCATGTTCTCCGGGAGATCCAGGGGCCATAGAGATGACTTGGATGGATGTCCCTGGTGATAAACTCTTAGAGCCTGTGGTTTGCATGTCTGACATGCTCCGGTCTTTGGCCACTACCCGGCCCACAGTGAATGCAGACGACCTCCTGAAAGTAAAGAAATTCTCTGAGGACTTTGGACAGGAGAGTTAAAGCTTCATGTGATAATGAAATTGAGAGTCTGACTGGAGAAAATTCATGGGACTTCGTACACCAGTGGCCAGGCAGGGCCTGAAGTCGTGAAGTCAATAGTATTTCCTCTACTGCCTGGCTGTCAACCTAGTAGGATGAAGAAGGGGCCTCCCCAGCTGCAGAGATGCTTCACCATGTAGGACACTTGAGACTGGCTCTGCATACTTCACTACTGGATGCTCACACTCCTTGCCCTGATCTGTTTTTGTCTAACTTTTGTTCCCCTAAATTAATGCCGCTTTGATTTCTGTCTTGtttataaataaagagaaaagtcaTCTGGAAATGTTAAGGAGTGGGAGCTGCCAGGCCCCTGCTTTCACTCCTTGCCTCTTAACTTTGGCTACTTGTGAGCTGACTGTGGTAAAGTAGGAAAAGCCATCCCACTCTCCTAAGCTTGCATCTGGAGCTTCAGGTCCTCCTTGCAGgagctgacagcttctgtgaaCACGATGCCGTTTCCATCAGGAGAGACGGCAAACAGGCAGGTCTTTATCGCTGCCTTCACCTGAGAACTGAGCCCAGCCTCTGCTGGTCCTGTCCTGGAGATGTCTAATAAACCCTTTTCCCTTATTGAGCTA