Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Amd1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name S-adenosylmethionine decarboxylase 1
Also known as AdoMetDC|Amd-1|SAMDC|SAMDC 1|adoMetDC1
Coordinate chr10:40163454-40178184
Strand -
Gene summary Enables adenosylmethionine decarboxylase activity. Acts upstream of or within in utero embryonic development; spermidine biosynthetic process; and spermine biosynthetic process. Predicted to be active in cytosol. Is expressed in several structures, including alimentary system; central nervous system; cranium; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Orthologous to human AMD1 (adenosylmethionine decarboxylase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Amd1

Retroname Coord Strand Genomic Region ENSG
Amd1P5 chr17:95110628-95113689 + Intergenic
 ENSMUSG00000117642 UCSC
Amd1P6 chr18:64581195-64583085 - Intergenic
 ENSMUSG00000060096 UCSC
Amd1P1 chr4:51252472-51254362 - Intergenic
 ENSMUSG00000019836 UCSC
Amd1P2 chr6:70107004-70109489 + Intergenic
 ENSMUSG00000106192 UCSC
Amd1P3 chr9:24737003-24738978 - Intergenic
 ENSMUSG00000111507 UCSC
Amd1P7 chrX:153937866-153941046 + Intergenic
 ENSMUSG00000083823 UCSC
Amd1P4 chr10:35584685-35587887 - Intergenic
 ENSMUSG00000063953 UCSC

Expression

Transcript Sequences

>NM_009665.5
TCGCTTACACAGTATGGCCGGCGACATTAGCTAGCGCTCGCTCAACTCTCCTAACGGGAAAGCAGCGGACTACAAGAGACTGAACTGTATCTGCCTCTATTTCCAACAGACTCACGTTCAACTTTCGCTCACGAAAATAGCCGGGAAAATTTTATtagtcctttttttaaaaaaaagttaatataaaattatagcaaaaaaaaaaaaaaaaggaacctgaACTTTAGTAACACAGCTGGAACAATCCGCAGCGGCGGCAGGAGCGGCGGGAGAAGAGATTTAATTTAGTTGATTTTCTGTGGTTGTTGGTTGTTCGCTAGTCTCACGGTGATGGAAGCTGCACATTTTTTCGAAGGGACGGAGAAACTGCTGGAGGTCTGGTTTTCCAGACAGCAGTCCGACGCAAGCCAGGGATCTGGGGATCTTCGTACCATCCCAAGATCTGAATGGGATGTCCTTTTGAAGGATGTGCAGTGCTCAATCATAAGTGTGACAAAGACTGACAAGCAGGAAGCTTATGTACTCAGTGAGAGTAGCATGTTTGTCTCCAAGAGACGTTTCATTTTGAAGACATGTGGTACCACCCTCTTACTGAAAGCACTGGTTCCCCTGTTGAAGCTTGCTAGGGATTACAGTGGGTTTGACTCAATTCAAagCTTCTTTTATTCtcgtaagaatttcatgaagcctTCTCACCAAGGGTACCCACACCGGAATTTCCAGGAAGAAATCGAGTTTCTTAATGCAATTTTCCCAAATGGAGCAGCATATTGTATGGGACGCATGAATTCTGACTGCTGGTACTTGTATACTTTGGATTTCCCAGAGAGCCGAGTAATCAGTCAGCCAGATCAAACACTGGAAATTCTGATGAGTGAGCTTGACCCAGCAGTTATGGACCAGTTCTACATGAAAGATGGTGTTACTGCAAAGGATGTCACTCGTGAGAGTGGAATTCGTGACCTGATACCAGGTTCTGTCATTGATGCCACACTGTTCAATCCTTGTGGCTACTCGATGAATGGAATGAAATCGGATGGAACATATTGGACTATTCACATCACTCCAGAACCAGAATTTTCTTATGTTAGCTTTGAAACAAACCTAAGTCAGACCTCCTATGACGACCTGATCAGGAAAGTTGTGGAAGTCTTCAAGCCAGGAAAATTTGTGACCACCTtgtttgttaatcagAGTTCTAAATGTCGCACAGTGCTTTCTTCGCCCCAGAAGATTGACGGCTTTAAACGTCTTGATTGCCAGAGTGCTATGTTCAACGATTACAATTTTGTTTTTACCAGTTTTGCTaagaaacagcaacaacagcagagttgattaggaaaaatgaagaagaaaaaacgcAAAAAGAGAAGACACACAGGAGGTGGTGGCTGCTTTCTAGATGCTGATCCTGAGGGCCATGCTGACCATGACCACCACCTCGTAGTTGCAGAAAGCCCTAGGTGTAATGATAGTGCAATCATTTTGAAGTGTATGCATTATTATATCAAGGAGTTAGGTATCTTGCATGAATGCTCTCTTCTGTGTTTAGGTGTTCTATGCCACTCTTGCTGTGGAACTGAAGTGCATGTAGAAAAGACCTTTGACTGTATGAATCTTTACGACACTTGTGAAAATGATACAATTTGGTTTATGCACAGTGTAATATTTCTGCAGGCATCATCCAAAATTCCCCACAGACAAGGCTTTCGTCCCCATTAGATGCGGCCTCAGCTGACATCTGTGACTGTTCTATTAAATTGCTGCCAGAGTTTTTACATCCAGGCACCTCCACTTTCTAGGGCATATTCTCTACTAATGTTACTCAAAACCAATTTCTACTTCATACAGGTGTTTTATGCAATGGCAATTAAAGTTTTTCTTCCACAAGTTGAGTCTTTGTAAGAAAATGACTCCAGTTGCTTGTTTTATGTTCTGCTGTTTTAATAATTGCTCCTGCATTTAGAGTCCTATAGTTTTTCCACCACCTTTGATGAAGCAATACACTGTTACACTGTGGGCTTATATTATAATTTTACACCCCAGGTGAGAGTTTGGAGATGGTCccttgcttaattttttttcctaagacatAAGAATGTGGTCTCTTTATTGGCATGAACTTCTGTGGAAGATAAATGACAAAACTGAATGTATCAAATGAAAAGAACTCACAGTCTCCAGGGCGATGAGCAAGGAGAACCCATTAAAGAAAACTCCATGGAAATGATAGGCTGTGCAGTGCACCTTAATTAGCGTTAATGGAGTGCCTACTATGCCCTCACTAATTTACTAAGTGATAGGAATGTCCACTATGTCAAAGCAGAAATGTAGTCCTAGCATTCTGACCTCAGTAAGTGCTGCCGTTGCCACCAGGTTTTATTTACTAAAGGAGATTTTGATTCGAAGGAGAATCTGGTTTCTACTTGTCCTACCGTCAGCTGGTCTCTGGTCTTCCTTTCACCGTGGCCTTCAGATGATCAGATGAATGACTGACCAGAGGGAGGAGGCCTCTCCAGGTTACTCAGCCAGATAGTGAATGTATGAATGGATGGAACGGCGCAATATTCTGAATCTATTTAATGGCACTAGAAATAATGGGCGTTGAAGAGTCGGCATGTTGGTGGGACTTAAACAGAAAAGAGCAAACTGGACTAAACTCCCTATTTATTGCCCTTCTGTTTTCTTGGTAGTTTCTGGACTGATGCAGTGATGTTTTGTTCCTTCCGTATTTATAACGAAACACTTTTTTAGCGTTTCTAAACAGAGTCTACTTGGTTTGAGATCAAGTGGTTGGAACACTGTCTGGACTCTTTCTACACGGTGTTGATTGAAGGCTTCTTTGGGGAAGCTTTCGGTCAGCTTTATCTGTCTGATTCTGTAATGAGCACAGCACCTATTTTGAATTGCTATTTGGAGGGCCAGTGCTTATTTAAGCTGGATTTTGTAACCCAGTAGATTTTGGCTTGAGGTCTGATTTCCCCGTCTTAAATTAAGAATCCTAATGTTGAGAATTGCATAGGTTTGTGTGGAACAAAGCCTAGAACAACTGTAGGTAAACTAGTGATCTAGTCTAATTACAGGTGGGGAAGTTTTGGTGCCATAATTTCTCTTTGTTGGTGTTGGACTTTTAATCAGCTGAAATGTATTTCTGTACCACAATGTAAGCTTCAATAAAAGTTTGCTTAATTGTCTAGTAACATTGA