Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name H3f3b
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name H3.3 histone B
Also known as H3-3b|H3.3B
Coordinate chr10:104573666-104575890
Strand -
Gene summary Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; RNA polymerase II core promoter sequence-specific DNA binding activity; and nucleosomal DNA binding activity. Involved in brain development and response to hormone. Predicted to be located in chromosome, telomeric region and nuclear chromosome. Predicted to be part of nucleosome. Predicted to be active in nucleus. Orthologous to human H3-3B (H3.3 histone B). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from H3f3b

Retroname Coord Strand Genomic Region ENSG
H3f3bP1 chr2:198380597-198380836 - Intergenic
 N/A UCSC
H3f3bP2 chr6:6469973-6471227 - Intergenic
 N/A UCSC
H3f3bP3 chr9:424152-424362 - Intergenic
 N/A UCSC
H3f3bP4 chr16:66411179-66411389 + Intergenic
 N/A UCSC
H3f3bP5 chr17:43776214-43776448 - Intergenic
 N/A UCSC
H3f3bP6 chr17:44760067-44760466 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_053985.2
GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGAGGAGCTTCGTCTTGTTCTGCTCTGCGATTGCGGCGCTTGTTCGAGCGCTTACAGCGGCGCGTCGGTCCCAGCAAGGGCCTCAGACTTCAGCTTTGGGTGAGAGAAGATGGCCCGAACCAAGCAGACCGCTAGGAAGTCCACCGGAGGGAAAGCCCCCCGCAAACAGCTGGCCACCAAGGCGGCCCGGAAAAGCGCGCCCTCTACTGGCGGGGTGAAGAAACCTCATCGCTACAGGCCCGGGACCGTGGCTCTAAGAGAGATCCGTCGTTACCAGAAATCGACTGAGCTGCTCATCCGGAAGCTACCCTTCCAGAGGTTGGTGAGGGAGATCGCCCAGGATTTCAAAACCGACTTGAGGTTTCAAAGTGCAGCCATCGGTGCCCTTCAGGAGGCTAGCGAGGCATACCTGGTGGGGTTGTTTGAAGATACCAATCTGTGTGCCATCCACGCCAAGAGAGTCACCATCATGCCCAAAGACATCCAGTTGGCTCGCCGGATACGGGGGGAGAGAGCTTAAGTTGAAGCGATTTTTATGGCATTTTGTAGTAAATTCTGTAAAATACTTTGGTTTAATTTGTGACTTTTTTTGTAAGAAATTGTTTATAATATGTTGCATTTGTACTTAAGTCATTCCATCTTTCACTCAGGATGAATGGAAAGAGTGACTGTTCACAGACCTCAGTGATGTGAGCACTGTGGCTCAGGAGTGACAAGTTGCTAATATGCAGAAGGGATGGGTGATACTTCTTGCTTCTCATGATGCATGTTTCTGTATGTTAATGACTTGTTGGGTAGCTATTAAGGTACTAGAATTGATAAATGTGTACAGGGTCCTTTTGCAATAAAACTGGTTATGACTTGATCCAAGTGTTTAACCATACATCACTGTGATAGAATGTGGGCTTTTTCAAAGGTTGAAGATACAAGTTTTAGCCACAGTGTAACAGTTTCCTTTAAAAAAAAAAAGTAAACCTGGCAGCTATAGAATACACTATGTGCATTTATAATAGCTATTTTATATATTGTAGTGTTCAACATTTTTAAATTAAATGTTTTACATTCACAAGTGGTGGGGAGTCTTGTCATTAAGGTGTGTGTAATTTAGTCCAGTTGGTATTTCTGACTAGACTGCATTTGTTTTTAACAAAGTAGAAGAATGCTATGCGTATTAAACCTTGCATAAGTCCTCATTCTACCACATGTTCACTAACCCCTGACCCTCTGGCTGGTAACACAAAACACTAACGGGGATTTTCTTTAAGGGCTCTAGAGTAAAACAACAAGCTATTCACACCAGCATCATCTGTTCCTAATCTAGTTAGTGAGCTTTTCATTGTGTTTGGTCTTACGCCTAGACTGAGTTTGGTTTTGTTTTTAATCTTTAAGGGGGAAAACTGTACAAGGTTTGCTTTTCCTTGTGGAGTTTATAAACATGGGGGTAAGAGTACAGCTTGAGCTTATTGGACTCTGCCAATGAAGATGGGTTAGGTTACACCTGGTTACTATCCTGGCAAAAAAATCCCTTTTATAGAGATGGCCTTCAAGTGGTTTTTAAAAGTATCCTATTGAAGTTTTTAGGTCAATTATGTATGTTGACTAAATTTACAAATAAACTTGTTTAT