Summary

Gene Name	Csde1
Specie	Rattus norvegicus
Full Name	cold shock domain containing E1
Also known as	Unr
Coordinate	chr2:205525194-205552987
Strand	+
Gene summary	Predicted to enable RNA stem-loop binding activity. Predicted to be involved in IRES-dependent viral translational initiation; nuclear-transcribed mRNA catabolic process, no-go decay; and stress granule assembly. Predicted to be located in Golgi apparatus; cytosol; and plasma membrane. Predicted to be part of CRD-mediated mRNA stability complex. Orthologous to human CSDE1 (cold shock domain containing E1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Csde1

Retroname	Coord	Strand	Genomic Region	ENSG
Csde1P1	chr1:106915459-106917374	+	Intragenic	N/A	UCSC
Csde1P2	chr1:84568921-84571752	-	Intergenic	N/A	UCSC
Csde1P3	chr13:84433550-84437111	+	Intragenic	N/A	UCSC
Csde1P4	chr19:28220263-28223625	+	Intergenic	N/A	UCSC

Expression

Transcript Sequences

>NM_054006.1

ttttttttttAATACTAGCAACTTTCATTCTTTGGAACTTGTGCTGAAAAAAAGAAGAGTCAGCAAATACTACTGAAAGTGCAATATTCGATTATCACTGCGAGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACACAACGGGTACCCCAATGGTACTTCTGCAGCACTCCGTGAAACTGGGGTTATTGAAAAACTGCTGACCTCTTATGGATTTATTCAGTGTTCAGAACGGCAAGCTAGGCTTTTCTTCCACTGTTCACAGTATAATGGCAACCTCCAGGACTTAAAAGTAGGAGATGATGTGGAATTTGAAGTATCATCTGACCGGAGGACTGGGAAACCTATTGCTATTAAATTGGTGAAGATAAAACCAGAAATACATCCTGAAGAACGAATGAATGGACAAGTTGTGTGCGCTGTTCCTCACAACTTAGAGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATGGGGAAGTATTTTATCTGACTTACACCTCTGAAGATGTGGAAGGGAACGTTCAGCTGGAAACTGGAGACAAAATTAACTTTGTAATTGATAACAATAAACACACTGGTGCTGTAAGTGCTCGTAACATTATGCTGTTGAAAAAGAAACAAGCTCGCTATCAAGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTTATTGAAAGAGGTGATGTTGTAAAAGAGATATTCTTTCACTATAGTGAATTTAAAGGTGATCTAGAAACCCTGCAGCCTGGAGATGACGTGGAATTCACAATCAAGGACAGAAATGGTAAAGAAGTTGCAACAGATGTCAGACTATTGCCTCAAGGAACAGTCATTTTTGAAGATATCAGCATTGAACATTTTGAAGGAACTGTAACCAAAGTTATCCCAAAAGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTTGGAGACAAAGACACAAAATCCAAAGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAACAGACCGACGTGACAAATTAGAACGAGCAACCAACATAGAGGTTCTATCAAATACATTTCAGTTCACTAATGAAGCCAGAGAGATGGGTGTGATTGCTGCCATGAGAGATGGTTTTGGCTTCATCAAGTGTGTGGACCGTGATGCTCGTATGTTCTTCCACTTCAGTGAGATTCTCGATGGGAACCAGCTCCACATTGCAGATGAAGTGGAGTTTACTGTGGTCCCTGATATGCTCTCTGCCCAAAGAAATCATGCTATTAGGATTAAAAAACTTCCCAAGGGCACGGTTTCATTCCATTCCCATTCAGATCATCGTTTTCTGGGCACCGTAGAAAAAGAAGCCACTTTTTCTAATCCTAAAACTACAAGCCCAAATAAAGGCAAAGACAAGGAGGCAGAAGATGGCATTATTGCTTATGATGACTGTGGGGTGAAACTGACTATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCTCAAATAGGAGATAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGTGTGAGACTTTTAGGTCGTAATTCTAATTCCAAAAGGCTCTTGGGTTATGTGGCAACTCTGAAAGATAATTTTGGATTTATTGAAACAGCTAATCATGATAAGGAGATATTTTTCCATTATAGTGAGTTCTCTGGTGATGTTGATAGCCTGGAACTGGGAGACATGGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGAGAAAGTAAACAAAACTCACTCAGTGAATGGCATCACTGAGGAAGCAAATCCCACCATCTACTCTGGTAAAGTCATTCGTCCTCTGAGAGGCGTTGATCCAACACAGATTGAATACCAAGGAATGATTGAGATTGTGGAGGAGGGGGATATGAAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCCAACAAAGGGGATTGCCTACAGAAAGGGGAGAGTGTTAAGTTCCAGTTGTGTGTACTTGGCCAAAATGCACAAACTATGGCCTACAACATCACACCCCTTCGTAGGGCTACTGTGGAGTGTGTGAAAGATCAGTTTGGCTTTATTAACTATGAAGTAGGAGATAGCAAGAAGCTCTTTTTCCATGTGAAGGAAGTTCAGGATGGCATTGAGCTACAGGCAGGAGATGAGGTGGAATTCTCAGTGATCCTTAATCAGCGCACTGGGAAATGTAGCGCCTGTAATGTTTGGCGAGTCTGTGAAGGCCCCAAAGCTGTTGCAGCTCCTCGACCTGATCGGTTGGTTAATCGCTTAAAGAACATCACCCTGGATGATGCCAGTGCTCCACGTCTAATGGTTCTTCGTCAGCCAAGGGGACCAGATAACTCAATGGGATTTGGTGCAGAAAGAAAGATCCGTCAAGCTGGTGTCATTGACTAACCACGTCCACAAAGCACATCATTAATCCACTATGGTCAAGTTGGGGGGATTCTGGTGAAGGGTTCTGAATATCTTCCTCTTCATCCCTCCCAAAATCTGGAATACTTATTCTATTGAGCTATTACACCAGTTTTAACACCTTCCTCGTGTTATGTTTAAAGAAAAAATAAATAAATTTAAGAAACCATTTTAAAATTATGCACAGTTGCAGCCTGGAAAACTTAAGGTGGCGCCTTATAGTGTCAATTTAGGAGCTTTATTTGGTGCATTTAACGCAACTGGTAATTGCAAATTCCACTTGGCCTGTGTAAGTGAACAAAACAGACTGTTACTTTGTTGGCCCTATGAAATTCTGCACTCTAGTCAGTATATATACTCTACCTTCATGACTTAATACTCAGCTGCATTCTTTTCCTTTTTTCCCTCTGTTCATTATGCTTTAATTCTGAGGACCATATGAAGGTAGAATATATTACCTTTAAAAATTGCAAAAATTTATATAGCAAACGATTTTCTTAAGTTGATGGCCAAATGTTAAAATGTTATTTTCATATCATTTATAATCTTGTCACAATCCACTTAACGAAGTTTGATTACATTTCAGTGAAAATTATCTTCCATAATAGGTTTTTTTTTTCCTTCCTGGGATGGGGGGCAAATAACTTTACTACAATTAGTATGTATGGTGCAGAATTTCATGCAAATGAAGTGTGCCAGCAGTGTGATAATTTAAACATATTTAAACAAAAGACGAATGCACAAAATTGCTGCTGCTTAGATCACTGCAGCTTCTAGGACCCAGTTTCTTTTACTGATTTaaaaacaaaatgaaaaaaaaataataaaaaaGTTGTGCCTGAAATGAATCCTGTTTTTTTTATAAGTAGCCCCCTGGTTCCAGTGCCCTGTTGAATACAGGCACTTGATCCTTGGTGCAGCTTCTGTTCAACTTTGTATCACGGGAACGGATTGGCCTGATTTCTTGGCCTTCCTCTTGAATTGGCCCCAAACAGGGTCCCTGGCAAGTGGAGTGAAGGCTTTTTGTCTAAAGATGACAAGGGTCAGCTCAGGGGTTGTGGGGGAGGGCGTTTTCATCTTCCCCGTTGTCACTTGAGGTTTTGAACTCTGGGTAAAGAGGCCGTTTATCTTTGTAAACACAAAACATTTTTGCTTTCTCCGGTTTCATGTTAATGGCGAAAGAATGGAAGCGAATAAAGTTTTACTGATTTTTGA