Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Prdx1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name peroxiredoxin 1
Also known as Hbp23
Coordinate chr5:135536413-135551986
Strand +
Gene summary Enables heme binding activity; identical protein binding activity; and peroxiredoxin activity. Involved in response to oxidative stress. Located in several cellular components, including euchromatin; mitochondrial matrix; and peroxisomal matrix. Human ortholog(s) of this gene implicated in methylmalonic aciduria and homocystinuria type cblC. Orthologous to human PRDX1 (peroxiredoxin 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Prdx1

Retroname Coord Strand Genomic Region ENSG
Prdx1P1 chr2:142969507-142970360 - Intergenic
N/A UCSC
Prdx1P2 chr2:208738131-208738987 + Intergenic
N/A UCSC
Prdx1P3 chr2:25055145-25055948 + Intergenic
N/A UCSC
Prdx1P4 chr4:71644983-71645809 - Intergenic
N/A UCSC
Prdx1P5 chr6:124109093-124110151 - Intergenic
N/A UCSC
Prdx1P6 chr6:49393030-49393748 + Intergenic
N/A UCSC
Prdx1P7 chr18:59626422-59627095 - Intergenic
N/A UCSC
Prdx1P8 chr20:34223924-34224451 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_057114.1
CTCACGGTTGGTTCTGTTTGTGAGACCTGTAGCTCGACTCTGCTGATAGCAAGATGTCTTCAGGAAATGCAAAAATTGGGCATCCTGCTCCCAGCTTCAAAGCCACGGCTGTTATGCCCGATGGACAATTCAAAGATATCAGCCTAAGTGATTACAAAGGAAAATATGTTGTATTCTTTTTTTACCCTCTTGACTTTACTTTTGTGTGTCCCACGGAGATCATTGCTTTCAGTGATAGAGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGAGCTTCTGTGGATTCTCACTTCTGTCATCTGGCATGGATTAACACACCCAAGAAACAAGGAGGATTGGGACCCATGAACATTCCCTTGGTATCAGATCCCAAGCGCACCATTGCTCAGGATTATGGAGTCTTAAAAGCTGATGAAGGTATCTCTTTCAGGGGCCTCTTTATTATTGATGATAAAGGTATCCTTCGCCAGATAACAATAAATGATCTTCCTGTTGGCCGCTCTGTGGATGAGATTCTGAGACTAGTCCAGGCCTTCCAGTTCACTGACAAACATGGTGAAGTGTGCCCAGCTGGCTGGAAACCTGGCAGTGATACCATCAAGCCTGATGTCAATAAGAGTAAAGAGTATTTCTCTAAGCAGAAGTGAGCACTGGACCAGTTTTCTGGCAGACAGCTTTGAGCAGCCAGAAGAAATTTGTACTCTACACATGACGTGGTGTGATTCCAGATAAGCCTTTCCTACAAGGGCTAGGGGTGGTTAGCCTTTCTTCCACTATTGGTAAGGGGCAGACCATCTTATATCAGTCACAGAAACCAACCTGTTAATTTTCTCTCTCTCTCTCTTTTTTTTTTTTTAAGTATCTATTAAACGTGAATTC