Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ptpn12
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name protein tyrosine phosphatase, non-receptor type 12
Also known as Ptpg1|RKPTP
Coordinate chr4:10631129-10702390
Strand +
Gene summary Enables protein tyrosine phosphatase activity. Involved in tissue regeneration. Predicted to be located in cytosol and podosome. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to human PTPN12 (protein tyrosine phosphatase non-receptor type 12). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ptpn12

Retroname Coord Strand Genomic Region ENSG
Ptpn12P1 chrX:14792941-14793172 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006235868.3
tggggaagacggagcgggcgctgcggcgcgcgggcgggcggcgggggggACGCGGGAGGATGGAGCAAGTGGAGATTCTGAGGAGGTTCATCCAGAGGGTCCAGGCCATGAAAAGTCCGGACCACAATGGGGAGGACAACTTCGCCCGGGACTTCATGCGATTGAGAAGATTGTCTACCAAATATAGAACAGAAAAGATTTATCCCACAGCCACTGGAGAAAAAGAAGAAAATGTTAAAAAGAACAGATATAAGGACATACTGCCATTTGATCACAGCCGAGTTAAGTTGACTTTGAAGACACCATCCCAAGATTCAGATTATATCAATGCAAATTTTATTAAGGGTGTATATGGGCCGAGAGCATACGTGGCAACCCAAGGGCCTTTGGCGAATACAGTCATAGACTTCTGGAGGATGATATGGGAGTACAATGTGGTGATCATTGTAATGGCCTGTCGTGAATTTGAGATGGGAAGGAAAAAGTGTGAGCGCTATTGGCCTTTGTATGGAGAAGATCCTATAACATTTGCACCATTTAAAATTTCTTGTGAAAATGAACAAGCAAGAACAGACTACTTCATTCGAACACTTTTACTTGAATTTCAAAATGAATCCCGTCGACTCTATCAGTTTCATTACGTGAACTGGCCAGACCATGATGTCCCTTCGTCATTCGATTCTATCCTGGACATGATAAGTCTAATGAGGAAGTACCAAGAGCACGAAGATGTGCCTATTTGTATCCATTGCAGTGCAGGCTGTGGACGGACAGGTGCTATTTGTGCCATCGACTACACGTGGAACTTACTGAAAGCAGGGAAAATTCCAGAGGAATTTAATGTATTTAATTTAATACAAGAAATGAGAACACAAAGGCACTCTGCAGTACAAACGAAGGAGCAGTATGAACTCGTCCATAGAGCTATTGCCCAACTGTTTGAAAAACAGCTACAACTGTATGAAATCCACGGAGCCCAGAAAATCACTGATGGTAATGAAATTAGCACTGGAAACATGGTCAGTTCCATTGATAGTGAAAAACAAGATTCTCCTCCTCCAAAGCCACCACGGACTCGAAGTTGTCTTGTAGAGGGGGATGCCAAGGAAGAAATCCTCCAGCCACCAGAGCCTCACCCGGTGCCGCCCATCCTGACACCGTCGCCTCCTTCAGCATTCCCAACCGTTACCACTGTGTGGCAAGACAGTGACAGGTACCACCCAAAGCCAGTGCTGCACATGGCTTCCCCAGAGCAGCCCCCAACGGACCTCAACAGAAACTATGATAAGTCAGCGGACCTAATGGGGAGAAGCGAATCTGCTGTTGAGCACACAGATAAAAAGTTAGAACAAAATTTAAGTTTTGAGATTAAGAAAGTCCCTCTCCAAGAAGGGCCCAAAAGTTTTGATGGGAACACACTCTTGAATAGGGGACATGCGATTAAAATTAAGTCTGCTTCATCTTCTGTAGTTGACAAAAGCTCTAAGCCACAGGAGTTAAGTTCAGGTGATCTAAAGGTTCACGATGTGTCTCAGAATTCCTGTGCGGACTGCAGTGCCTCACACTTAGACAACGCTCCTGAGTCTTCAGAAGAGTCCCAGAACTCACACACACCTCCACGGCCAGACTGCTTGCCCCTTGATAAGAAAGGACATGTGACATGGTCACTTCATGGACCTGAAAATGCCACACCTGTATCTGACTCACCAGATAATCATTCTCAAACTCTAAAAACTGTGAGTTCCACACCAAACTCGACAGCAGAAGAGGAATCCCACGATCTCACAGAGCACCATAACAGCTCCCCTCTGCCGAGAGCTCCTCTCAGCTTTACCAACCCTCTTCACTCTGACGACTCCGACTCAGACGAAGGGAACTCCGATGGTGCTGTGACCAAGAACAAAACTAGCATTTCAACAGCAAGTGCCACCGTGTCTCCTGCCAGTAGTACCGAGAGTGCTTGCACTAGGAGAGTACTGCCCATGTCCATTGCCAGGCAGGAAATGGCAGGAAGGCGGCATTCAGGTGCTGAGAAAGATGCTGACGTTAGTGAAGAGTCGCCTCCTCCCTTACCTGAAAGAACTCCCGAGTCTTTTGTATTAGCAGATATGCCCATAAGATCTGATTGGCATGAACTTCCAAGTCAGGAGTGCTCGGAGCACAGGGAATCTGAAGGCTTGATAACCTCTGGAAATGACAAACACGGTTTTGGTAATCGCTGTGGAAAACCTAAAGGACCAAGAGATCCACCTTCAGAATGGACATGATTCAGGGAGTTAAAAGACACTTTAAATTATACTGGAAAATTCAAGTGCCACTGAAAGCCAGATTTATAGTATTCCATCTTTAAAATGTGGGACTGATAGCAGTGTAGATTGTTACCTTAATATTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTTAGGAGAAAGTATTACATATTGTTTATTTTGTAACTTCAAGTATTATTGCCTTAATGTCTCTTAACCCTGTTACAAGCTGCTTGTAGACCTGTTAATATAGTAATACTTTTATGATAAACTGAGTTAAAGGACTACTCTTTTGCTGTTTTATCATGTATGCATTATTTTGTATATGTACAGGGCAAGTAGGTATATAATTTGATAAAGTTGAAGTCCTAAAATATTATTAACAGAAGATGTAAGAATTTCTGCATGGTTTAAGTCTTTGTGTATCTTACTTGTAAATTATTTGCCCTGAAATTTTAGAAAACTGTTTCTGAATTTTAAACTTGCTGGATTCGTGTAGCCAGCATTGCAGGTTATCAGAGATCAAAGAGTGTAATAATAATACCTTTTGTAAATTGTAAGCAAAAAGTTATTTTTATATTATATACTGTCTAATTGTTCACCCTAATGGTTCTTGTTTTCGTCTAGTCATGGAGATTCAGTAAGTGCCTTGGAACAACATTGACTTCCCTTAGCTCGAGTGTGTTACTTTCAAGTTTGAATTCAACTGGGGTTAGAAGACTATCAGAATCTATGTATGTTTCAGGATATTTGTTGACCTGCCATTAAAAAAACAAACAGTTTTACACTGCTA