Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TPT1
Plot displaying the genomic locations of a parental gene (in scaffold_m29_p_3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rhinolophus ferrumequinum
Full Name N/A
Also known as NULL
Coordinate scaffold_m29_p_3:100701945-100705328
Strand -
Gene summary N/A

Retrocopy(s) from TPT1

Retroname Coord Strand Genomic Region ENSG
TPT1P1 scaffold_m29_p_1:15851416-15851815 - Intergenic
N/A UCSC
TPT1P2 scaffold_m29_p_1:22598909-22599428 + Intergenic
N/A UCSC
TPT1P3 scaffold_m29_p_1:30242173-30242686 + Intergenic
N/A UCSC
TPT1P4 scaffold_m29_p_1:54770623-54770962 - Intergenic
N/A UCSC
TPT1P5 scaffold_m29_p_2:8953523-8954020 - Intergenic
N/A UCSC
TPT1P6 scaffold_m29_p_3:32365069-32365572 + Intergenic
N/A UCSC
TPT1P7 scaffold_m29_p_3:69985806-69986055 - Intergenic
N/A UCSC
TPT1P8 scaffold_m29_p_3:75742439-75742954 + Intergenic
N/A UCSC
TPT1P9 scaffold_m29_p_3:85352596-85353105 - Intergenic
N/A UCSC
TPT1P10 scaffold_m29_p_4:63145103-63145621 + Intergenic
N/A UCSC
TPT1P11 scaffold_m29_p_4:76573948-76574387 + Intergenic
N/A UCSC
TPT1P12 scaffold_m29_p_5:28648753-28648986 - Intergenic
N/A UCSC
TPT1P13 scaffold_m29_p_7:35716086-35716608 - Intergenic
N/A UCSC
TPT1P14 scaffold_m29_p_7:5220728-5221242 + Intergenic
N/A UCSC
TPT1P15 scaffold_m29_p_7:712320-712833 + Intergenic
N/A UCSC
TPT1P16 scaffold_m29_p_8:82056967-82057392 - Intragenic
N/A UCSC
TPT1P17 scaffold_m29_p_8:97127722-97128208 + Intergenic
N/A UCSC
TPT1P18 scaffold_m29_p_8:98296033-98296504 - Intergenic
N/A UCSC
TPT1P19 scaffold_m29_p_9:89623981-89624304 - Intergenic
N/A UCSC
TPT1P20 scaffold_m29_p_10:60541689-60542170 + Intergenic
N/A UCSC
TPT1P21 scaffold_m29_p_10:64851508-64851845 + Intergenic
N/A UCSC
TPT1P22 scaffold_m29_p_10:66171404-66171657 + Intergenic
N/A UCSC
TPT1P23 scaffold_m29_p_11:61178148-61178633 - Intergenic
N/A UCSC
TPT1P24 scaffold_m29_p_12:39975348-39976581 - Intergenic
N/A UCSC
TPT1P25 scaffold_m29_p_12:51155874-51156028 + Intergenic
N/A UCSC
TPT1P26 scaffold_m29_p_13:22048525-22048828 + Intergenic
N/A UCSC
TPT1P27 scaffold_m29_p_13:41592773-41593286 - Intragenic
N/A UCSC
TPT1P28 scaffold_m29_p_13:58439015-58439536 + Intergenic
N/A UCSC
TPT1P29 scaffold_m29_p_14:66377457-66377910 + Intergenic
N/A UCSC
TPT1P30 scaffold_m29_p_16:34489905-34490409 - Intergenic
N/A UCSC
TPT1P31 scaffold_m29_p_17:53914983-53915351 - Intergenic
N/A UCSC
TPT1P32 scaffold_m29_p_19:25912860-25913374 + Intergenic
N/A UCSC
TPT1P33 scaffold_m29_p_21:25107087-25107587 + Intergenic
N/A UCSC
TPT1P34 scaffold_m29_p_21:28207816-28208289 - Intragenic
N/A UCSC
TPT1P35 scaffold_m29_p_21:33861164-33861482 - Intergenic
N/A UCSC
TPT1P36 scaffold_m29_p_22:10975985-10976566 - Intergenic
N/A UCSC
TPT1P37 scaffold_m29_p_22:11493147-11493474 - Intergenic
N/A UCSC
TPT1P38 scaffold_m29_p_23:24060706-24061679 - Intragenic
N/A UCSC
TPT1P39 scaffold_m29_p_24:25762201-25762696 - Intergenic
N/A UCSC
TPT1P40 scaffold_m29_p_25:28885774-28886092 - Intergenic
N/A UCSC
TPT1P41 scaffold_m29_p_29:4907189-4907692 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>TPT1_x3
ATGATCATCTACCGGGACCTCATCAGCCATGATGAGATGTTCTCCGACATCTACAAGATCCGGGAGATCGCGGACGGGCTGTGCCTGGAGGTGGAGGGGAAGATGGTCAGTAGGACAGAGGGTAACATTGATGACTCGCTCATTGGTGGAAATGCCTCCGCTGAAGGCCCCGATGGCGAAGGTACCGAAAGCACGGTAGTCACTGGTGTTGATATTGTCATGAACCATCATTTGCAGGAAACCAGCTTCACAAAAGAAGCATATAAGAAGTACATCAAGGATTACATGAAATCAATCAAAGGGAAACTTGAAGAACAGAGACCAGAAAGAGTAAAACCTTTTATGACAGGGGCTGCAGAACAAATCAAGCATATTCTTGCTAACTTCAAAAACTACCAGTTCTTTATTGGTGAAAACATGAATCCAGATGGCATGGTTGCTCTGCTGGACTACCGTGAGGATGGTGTGACCCCATATATGATTTTCTTTAAGGATGGTTTAGAAATGGAAAAATGTTAA