Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tpm3
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name tropomyosin 3
Also known as TM30nm|Tpm5
Coordinate chr2:189423534-189451340
Strand +
Gene summary Predicted to enable actin filament binding activity. Involved in brain development. Located in brush border. Human ortholog(s) of this gene implicated in congenital fiber-type disproportion and nemaline myopathy 1. Orthologous to human TPM3 (tropomyosin 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tpm3

Retroname Coord Strand Genomic Region ENSG
Tpm3P2 chrX:144627362-144629076 - Intergenic
 N/A UCSC
Tpm3P3 chrX:82292222-82294096 + Intragenic
 N/A UCSC
Tpm3P1 chr2:101137030-101138746 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_173111.1
GCTACAACGCCGAGCGGAGGAGGTAGGAACCTGATTTCCAGAAGCAGCTGGGTAGGCACCATGGCCGGGAGCACCACCATCGAGGCGGTAAAGCGCAAGATCCAGGTTCTGCAGCAGCAGGCTGATGATGCGGAGGAGAGGGCCGAGCGCCTCCAGCGGGAAGTGGAGGGAGAAAGGCGGGCCCGGGAGCAGGCTGAAGCTGAGGTGGCCTCCTTGAACCGCAGGATCCAGCTGGTTGAAGAGGAGCTGGACCGCGCCCAGGAGCGCCTTGCCACTGCTTTGCAGAAGCTGGAGGAAGCGGAGAAGGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTGATTGAAAACCGGGCTCTAAAAGATGAAGAAAAGATGGAGCTCCAGGAAATCCAGCTGAAGGAAGCAAAGCACATTGCAGAAGAGGCAGACAGGAAGTATGAAGAGGTGGCTCGTAAGTTGGTGATTATTGAAGGAGACTTGGAACGCACGGAGGAACGCGCCGAGCTGGCAGAGTCCCGTTGCCGAGAGATGGATGAGCAGATCAGACTGATGGACCAGAACCTGAAGTGTCTGAGTGCTGCTGAAGAAAAGTACTCTCAAAAAGAAGACAAGTATGAAGAAGAAATAAAGATTCTTACTGATAAACTCAAGGAGGCGGAGACCCGGGCTGAGTTTGCTGAAAGATCGGTAGCCAAACTGGAAAAGACCATTGATGACTTGGAAGATAAGCTGAAGTGCACCAAAGAGGAGCATCTCTGTACACAAAGGATGCTGGACCAGACCCTGCTGGACCTGAACGAGATGTAGACCTTCCCCATccctgccctgccctgcggccgctcctccctctgacctTGACTCCGCCTGAGGCCAGCCTCCCTGAAGCTGGCCTTGAAACTGAGGGCTGATCTTTTTAACTGAAGGCTGCTTTCCCTCCTGCCACCCCTCTTACCCCTCTTGTCTTTTTCACAAAACTGTGTCAGCCTCTTCCCAGAGTTCCAGCTGGAGGGCTGAACACCTTTGGGAACAATATTTAAGGGAATGTGAGCACAGCGCAAAGTGTCCTCAATGCAGTTGTGATATGCACATTGTGATTACTTTTTGTCTTAGCAACCATTTTTAACATTCCAAGCACTTGTGCAGCTTGGAGCAGCACATCTTAGCCTAATGGATACCGTCTCTCCATGGAGGAGAAACACAGGAATGGGCCTGCCTTACTGAGAGCCAGCAGAGCCCAGGCAGACTCCACTGTGGGAGACCTCAGTGCTCTGTACCAAGTCTTAGCCAAACAACAGGGATTCTAGGAAGTTAGCCAAAAACAAAAACCATTCCGGTCTGTGAAGGTTTTCAGCTTTGATATCTTTGAACAACTTTACACTTATTTTTAGTTTTGACTTTTTCCGTCCGATGTGACCAAATAGGAGAGTGAGACATCTGAGACGCCCCCGCCTCCCAGGGCCCTTGTGCATGTTAGGCCAGCGTGCTACCGTTCACCCCCAGCCCTGAGCCCGAACTTGTCTCAGCTCTACCCCTTTCCCAACTGCTCAGAAATGGATCATGCTGCCCCTTAGTGTTGTGGTGACCTCTTAGTGTTCACCTGCCCCCAAGGGAGACGGAAAAGGAAATTATGTTTGTGCCACTGATTTAGCCACATGAAAGTCATCTCATTGCTCTTTCCTGAAGCTGCTGTCTCTAAAGTGCCATCTCTTTGTGCTTTGTATCAGTCAGTGCTGGAGAAATCTTGAATAGCTTATGTTTAAAAAAAAAAAA
>XM_006232568.3
GCTCAAACTTGGGGAAGTTTGAGTGACCCAGGCAGCAGCCCTTCCTTTCTGGCTCTAGCCTCCAGTTCTCCAGTGTTCACAGGTGAACCCACCAACAGTCACAGCTCATGATGGAGGCCATCAAGAAAAAAATGCAGATGCTGAAGTTAGACAAAGAGAATGTCCTGGACCGAGCTGAGCaagctgaagctgagcagaagcaggcagaagaaagaagcaAACAGCTAGAGGATGAACTAGCAACCATGCAGAAGAAGCTGAAAGGGACAGAGGATGAGCTGGACAAGTATTCTGAGGCTTTAAAGGATGCCCAGGAGAAGCTGGAGCTAGCAGAGAAGAAGGCAGCGGATGCTGAAGCTGAGGTGGCCTCCTTGAACCGCAGGATCCAGCTGGTTGAAGAGGAGCTGGACCGCGCCCAGGAGCGCCTTGCCACTGCTTTGCAGAAGCTGGAGGAAGCGGAGAAGGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTGATTGAAAACCGGGCTCTAAAAGATGAAGAAAAGATGGAGCTCCAGGAAATCCAGCTGAAGGAAGCAAAGCACATTGCAGAAGAGGCAGACAGGAAGTATGAAGAGGTGGCTCGTAAGTTGGTGATTATTGAAGGAGACTTGGAACGCACGGAGGAACGCGCCGAGCTGGCAGAGTCCCGTTGCCGAGAGATGGATGAGCAGATCAGACTGATGGACCAGAACCTGAAGTGTCTGAGTGCTGCTGAAGAAAAGTACTCTCAAAAAGAAGACAAGTATGAAGAAGAAATAAAGATTCTTACTGATAAACTCAAGGAGGCGGAGACCCGGGCTGAGTTTGCTGAAAGATCGGTAGCCAAACTGGAAAAGACCATTGATGACTTGGAAGATAAGCTGAAGTGCACCAAAGAGGAGCATCTCTGTACACAAAGGATGCTGGACCAGACCCTGCTGGACCTGAACGAGATGTAGACCTTCCCCATccctgccctgccctgcggccgctcctccctctgacctTGACTCCGCCTGAGGCCAGCCTCCCTGAAGCTGGCCTTGAAACTGAGGGCTGATCTTTTTAACTGAAGGCTGCTTTCCCTCCTGCCACCCCTCTTACCCCTCTTGTCTTTTTCACAAAACTGTGTCAGCCTCTTCCCAGAGTTCCAGCTGGAGGGCTGAACACCTTTGGGAACAATATTTAAGGGAATGTGAGCACAGCGCAAAGTGTCCTCAATGCAGTTGTGATATGCACATTGTGATTACTTTTTGTCTTAGCAACCATTTTTAACATTCCAAGCACTTGTGCAGCTTGGAGCAGCACATCTTAGCCTAATGGATACCGTCTCTCCATGGAGGAGAAACACAGGAATGGGCCTGCCTTACTGAGAGCCAGCAGAGCCCAGGCAGACTCCACTGTGGGAGACCTCAGTGCTCTGTACCAAGTCTTAGCCAAACAACAGGGATTCTAGGAAGTTAGCCAAAAACAAAAACCATTCCGGTCTGTGAAGGTTTTCAGCTTTGATATCTTTGAACAACTTTACACTTATTTTTAGTTTTGACTTTTTCCGTCCGATGTGACCAAATAGGAGAGTGAGACATCTGAGACGCCCCCGCCTCCCAGGGCCCTTGTGCATGTTAGGCCAGCGTGCTACCGTTCACCCCCAGCCCTGAGCCCGAACTTGTCTCAGCTCTACCCCTTTCCCAACTGCTCAGAAATGGATCATGCTGCCCCTTAGTGTTGTGGTGACCTCTTAGTGTTCACCTGCCCCCAAGGGAGACGGAAAAGGAAATTATGTTTGTGCCACTGATTTAGCCACATGAAAGTCATCTCATTGCTCTTTCCTGAAGCTGCTGTCTCTAAAGTGCCATCTCTTTGTGCTTTGTATCAGTCAGTGCTGGAGAAATCTTGAATAGCTTATGTTTAAAAAAAAAAAAGAACTTTTTAAATTTTATATTATTTTGAAATTGTTTTTGGGGGGTTAGGTTACCTTGGCCAACCCACTGGCTGTGAGAATTCTTTGCAGTCTATGGGCTAGTGGTGTGCTGATCTTTCAAGTGTCCCCACCCAATTGCCATGTTCAGGTGGTTTCTTCTCAGCCTGTTAGGTGGGCGCCCTGCAGATTCCTGGCTTGTTTGTACTCCTCCAACCGGAGAAAGAGAACCCTGTAGTGCAACTGTTTTGATACTGAATAGTGACAAGTGACATTTTGAATAAAGAACCAGTCCCTCCATGA
>XM_006232584.3
CGGGCGGGTGAGTGAGTTCCGGTATTTCAGGGCGGAGCAGGCGGAAGTAGGGTGAAAAGCGGCTACAACGCCGAGCGGAGGAGGTAGGAACCTGATTTCCAGAAGCAGCTGGGTAGGCACCATGGCCGGGAGCACCACCATCGAGGCGGTAAAGCGCAAGATCCAGGTTCTGCAGCAGCAGGCTGATGATGCGGAGGAGAGGGCCGAGCGCCTCCAGCGGGAAGTGGAGGGAGAAAGGCGGGCCCGGGAGCAGGCTGAAGCTGAGGTGGCCTCCTTGAACCGCAGGATCCAGCTGGTTGAAGAGGAGCTGGACCGCGCCCAGGAGCGCCTTGCCACTGCTTTGCAGAAGCTGGAGGAAGCGGAGAAGGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTGATTGAAAACCGGGCTCTAAAAGATGAAGAAAAGATGGAGCTCCAGGAAATCCAGCTGAAGGAAGCAAAGCACATTGCAGAAGAGGCAGACAGGAAGTATGAAGAGGTGGCTCGTAAGTTGGTGATTATTGAAGGAGACTTGGAACGCACGGAGGAACGCGCCGAGCTGGCAGAGTCCCGTTGCCGAGAGATGGATGAGCAGATCAGACTGATGGACCAGAACCTGAAGTGTCTGAGTGCTGCTGAAGAAAAGTACTCTCAAAAAGAAGACAAGTATGAAGAAGAAATAAAGATTCTTACTGATAAACTCAAGGAGGCGGAGACCCGGGCTGAGTTTGCTGAAAGATCGGTAGCCAAACTGGAAAAGACCATTGATGACTTGGAAGAGCGTCTCTACAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAGCTAACGCTGCATGGTCTTTGTGACTGACGGGCAGGGCTCCCTGATGCCCAGTAAACCCACACCACTGACCTGGACCCAGCCAAAAGCTGACTGCCTTTTAAAAAGTCACTGTTCGCCCTAAGCAAGTTGCTTTTTAATGAGGGCAGCTAGACTACTGTTGATTTCCTGGCAGCCCCCTTCAAGTTGCAATGGCTATTTCTATTCTAGAAGAGATTGTGGGTGATGAAGATGGGGCCTGGGAGGTTTAGTGCGGAACTTGGAAACCGTTAGCTGCAGCCCTCTCACCTGTATACTGACTGTAGGGTTTGCTCACCTGCATGGTTATTTTCTAACAATAAAAACACTGACTTGACAAGATGTTGTAGCTGCTTCATCTGCAGGCCCAGGGACGGGCTCTTCTGACTGGGTGGAAATGGGGATGGGAAAGACGGGTGTGTGCTGTGAAAATGGCCTGATTTGCGCGTTTTCTTCCCTGAAGCTCTGTGGTTTACTTGCTAAGCAGGTGAATGCTTGGTGTCCCTCCACTGGCTTTCTTCCTGATAGTTTTCCTTCTTGCTGCTTTTGTGTTTAGTTGTAAGTCACTGTCTGGGTCAGCTCTGTTAATAACTCTGCTAAAATCTCAATGGGGTTCTACTTAACAAGAATGCACCTGGGTAGTATTCCTGACTTAAACCTGAGGGCTCCTGTCCTCCCCACTTTGAAGAAGGTACCTACTGTAGGAGGATCTTGTGCTCTTTACCTGAGATTTTGATCTGTCCTTGTCTGCTGTGGTCTTACTCTACTGTAGCATTTCAAGTAGGTAATGACCTTCGGACAGAGCCAAAGAGTGGGTGGGTGCCTGGTGCTTTCTGCCGGATCCTCTGGAGACTGAAAGCTGAATACCTTTTGGTTGCTTGTGGGAGGGAGAGGAAATGATAGATAAGCCCAGTTCCCTCCCCCAGGTAGTAGAGAAAGTCCTTGGCTTTCAATAAGCAAGCCGGAGGTGCCACCGAACCCAGGGGTGTGGTAGCTGCCTCCTGTAACTTTTTTGCAACTGGAACAAGTCTCAGAATGGGGAGAACTTGGAACCTTGTATAACGCTCTTCTTTATTATTCC