Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rplp0
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein, large, P0
Also known as 36B4|Arbp|L10E
Coordinate chr5:115697526-115701788
Strand +
Gene summary Predicted to enable large ribosomal subunit rRNA binding activity and peptide binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within cellular response to interleukin-4. Located in dendrite. Is expressed in several structures, including gonad; integumental system; liver; small intestine; and spleen. Orthologous to human RPLP0 (ribosomal protein lateral stalk subunit P0). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rplp0

Retroname Coord Strand Genomic Region ENSG
Rplp0P7 chr10:16644636-16645518 + Intergenic
ENSMUSG00000112903 UCSC
Rplp0P9 chr12:79160393-79160885 + Intergenic
ENSMUSG00000112708 UCSC
Rplp0P10 chr13:67958290-67959390 + Intergenic
ENSMUSG00000097906 UCSC
Rplp0P11 chr13:84145845-84146175 - Intergenic
ENSMUSG00000114930 UCSC
Rplp0P12 chr16:85441141-85441985 + Intergenic
ENSMUSG00000116972 UCSC
Rplp0P1 chr2:152195461-152196557 + Intergenic
ENSMUSG00000081434 UCSC
Rplp0P2 chr3:93185379-93186456 + Intragenic
Intragenic
ENSMUSG00000081640 UCSC
Rplp0P4 chr6:93626676-93627281 - Intergenic
ENSMUSG00000107739 UCSC
Rplp0P5 chr7:3333089-3334060 - Intragenic
ENSMUSG00000108105 UCSC
Rplp0P6 chr8:103591406-103592504 - Intragenic
ENSMUSG00000063696 UCSC
Rplp0P16 chrX:37851672-37851982 + Intergenic
ENSMUSG00000082723 UCSC
Rplp0P14 chrX:143015851-143016628 - Intergenic
ENSMUSG00000082121 UCSC
Rplp0P15 chrX:153962603-153962820 + Intergenic
ENSMUSG00000081364 UCSC
Rplp0P3 chr5:84011020-84011681 + Intergenic
ENSMUSG00000106576 UCSC
Rplp0P8 chr10:75187815-75188869 + Intergenic
N/A UCSC
Rplp0P13 chr19:54811422-54811712 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_007475.5
GGACCGCCTGGTTCTCCTATAAAAGGCACACGCGGGCATGCGGCCCGTCTCTCGCCAGGCGTCCTCGTTGGAgtgaCATCGTCTTTAAACCCCGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAGGGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTCAAGATCATCCAACTTTTGGATGATTATCCAAAATGCTTCATTGTGGGAGCAGACAACGTGGGCTCCAAGCAGATGCAGCAGATCCGCATGTCGCTCCGAGGGAAGGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCTATCAGGGGCCACCTGGAGAACAACCCAGCTCTGGAGAAACTGCTGCCTCACATCCGGGGGAACGTGGGCTTCGTGTTCACCAAGGAGGACCTCACTGAGATTCGGGATATGCTGTTGGCCAATAAGGTGCCAGCTGCTGCTCGGGCTGGTGCCATCGCCCCGTGTGAGGTCACTGTGCCAGCTCAGAACACTGGTCTAGGACCCGAGAAGACCTCCTTCTTCCAGGCTTTGGGCATCACCACGAAAATCTCCAGAGGCACCATTGAAATTCTGAGTGATGTGCAGCTGATAAAGACTGGAGACAAGGTGGGAGCCAGCGAGGCCACACTGCTGAACATGCTGaacatctcccccttctccttcggGCTGATCATCCAGCAGGTGTTTGACAACGGCAGCATTTATAACCCTGAAGTGCTCGACATcacagagcaggccctgcactCTCGCTTTCTGGAGGGTGTCCGCAACGTGGCCAGTGTGTGTCTGCAGATCGGGTACCCAACTGTTGCCTCGGTGCCACACTCCATCATCAATGGGTACAAGCGCGTCCTGGCATTGTCTGTGGAGACTGAGTACACCTTCCCACTTACTGAAAAGGTCAAGGCCTTCCTGGCTGATCCATCTGCATTTGCGGCTGCTGCCCCTGCAgctgctgccaccactgctgccccTGCGGCTGCTGCAGCCCCTGCCAAAGCTGAAGCAAAGGAAGAGTCGGAGGAATCAGATGAGGATATGGGATTCGGTCTCTTCGACTAATCCCGCCAAAGCAACCAAGTCAGCCTGCTTAATTTGAGAAAGATGGAAATAAAGGCTTACTTCTCTTAAAACTCCGGTCTGGATTTATTTAGTTTGTTCACTTAAGCAGGATGAAAAAGCAAAACCGCTACTGTTTACTTTGTGTTGGCATCTTTGTTTCTAAAATTAAAGCTCCTAGTGTTTTtgtgggctttgtttgttttttgagacagtctcttgacTTGGTGCCATAGCTAGTCTGGGACAAAGATTTTCCAGGTgtgaattaaaggtgtatgtcatCAA