Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name SFR1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name SWI5 dependent homologous recombination repair protein 1
Also known as C10orf78|MEI5|MEIR5|bA373N18.1
Coordinate chr10:104120166-104126385
Strand +
Gene summary Enables nuclear receptor coactivator activity. Involved in cellular response to estrogen stimulus; double-strand break repair via homologous recombination; and positive regulation of transcription, DNA-templated. Located in nucleus. Part of Swi5-Sfr1 complex. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from SFR1

Retroname Coord Strand Genomic Region ENSG
SFR1P2 chrX:85849351-85850134 - Intergenic
 ENSG00000223707 UCSC
SFR1P1 chrX:120201609-120202771 - Intergenic
 ENSG00000227541 UCSC

Expression

Transcript Sequences

>NM_001002759.2
GCTCTCGCTGGGAATGGCGGAGGGAGAGAAAAACCAAGATTTCACTTTCAAGATGGAAAGTCCGTCAGACTCAGCTGTGGTTTTACCTAGCACTCCTCAGGCCTCTGCGAATCCATCATCTCCCTATACAAATAGTTCCCGAAAACAACCTATGAGTGCAACACTTAGAGAAAGATTAAGGAAAACAAGATTTTCATTTAATTCCTCTTACAATGTGGTGAAACGTCTTAAAGTAGAGAGTGAAGAAAATGATCAGACCTTTTCAGAGAAACCAGCATCTTCCACAGAGGAAAACTGTTTGGAATTTCAAGAAAGTTTTAAACATATAGACAGTGAATTTGAAGAAAATACAAATTTGAAAAATACTTTGAAGAATCTCAATGTCTGTGAATCTCAGTCACTTGATTCTGGATCATGCAGTGCTCTCCAAAATGAGTTTGTGAGTGAGAAGCTTCCTAAACAAAGATTAAACGCTGAAAAAGCCAAATTGGTGAAGCAGGTTCAGGAGAAAGAAGACCTTCTTCGGAGGCTAAAACTAGTCAAAATGTATAGATCAAAGAATGATCTGTCTCAGTTACAGTTGTTAATAAAGAAGTGGAGAAGCTGTAGCCAGCTCTTGCTTTATGAGTTGCAGTCAGCTGTGTCTGAAGAGAACAAGAAACTAAGCCTTACTCAATTGATAGACCACTATGGGTTAGATGATAAATTACTACACTATAACAGAAGTGAAGAAGAATTTATAGATGTTTAATTCCTGATTTTTGCTCCAGAATATCTTTGAGAATGACAACTTAATTAAAAGATACTTAGGCACtttttttttttttttgagactgagtttcgctcttgtcatcctggctggagtgtgatggtgcgatcttgactcactgcaacctctgcctctcgggttccagcaattctcctgcctcagcctcccgagtagctgagattacaggcgcccgccaccatgcccggctaatttttgcatttttagtagagactgggtttcaccacgttggccaggctggtctcgaactcctgacctcaggtgatccaccgcctaggcctcccaaaACCATTAGGGCTCAGAGGAAGGTATCCCAATGAATATCAATTAAGGGCACTTTAATATATAAATTATAAACTAAGTTCTAAAAGGAAAATTAGTATTTTGGATAGATTTGTCAAAACGACATTTAAGTCATGTTTAAAAAGTCATTTGGGCAGTTCTGGAAACTAGTTTTAATACATTTGTTTTTTATGACAAAAAGTTTTATTTTAAATGTTAAAAATTGTCCAATCTGGTGAATGTCTAACCCTAAAGTTTAAAAATTTCTGCCTCCTAAGTTTATGTACCTTGTTtccatccatttaccacatatttccatctgatagtctagcaggtaattaaacttatatgtccaaaacca
>NM_145247.5
CTACCGCACGGCCCCGCCCCTGCCACAGGATCGATTTACGGCCGCAGAGAAAAACCAAGATTTCACTTTCAAGATGGAAAGTCCGTCAGACTCAGCTGTGGTTTTACCTAGCACTCCTCAGGCCTCTGCGAATCCATCATCTCCCTATACAAATAGTTCCCGAAAACAACCTATGAGTGCAACACTTAGAGAAAGATTAAGGAAAACAAGATTTTCATTTAATTCCTCTTACAATGTGGTGAAACGTCTTAAAGTAGAGAGTGAAGAAAATGATCAGACCTTTTCAGAGAAACCAGCATCTTCCACAGAGGAAAACTGTTTGGAATTTCAAGAAAGTTTTAAACATATAGACAGTGAATTTGAAGAAAATACAAATTTGAAAAATACTTTGAAGAATCTCAATGTCTGTGAATCTCAGTCACTTGATTCTGGATCATGCAGTGCTCTCCAAAATGAGTTTGTGAGTGAGAAGCTTCCTAAACAAAGATTAAACGCTGAAAAAGCCAAATTGGTGAAGCAGGTTCAGGAGAAAGAAGACCTTCTTCGGAGGCTAAAACTAGTCAAAATGTATAGATCAAAGAATGATCTGTCTCAGTTACAGTTGTTAATAAAGAAGTGGAGAAGCTGTAGCCAGCTCTTGCTTTATGAGTTGCAGTCAGCTGTGTCTGAAGAGAACAAGAAACTAAGCCTTACTCAATTGATAGACCACTATGGGTTAGATGATAAATTACTACACTATAACAGAAGTGAAGAAGAATTTATAGATGTTTAATTCCTGATTTTTGCTCCAGAATATCTTTGAGAATGACAACTTAATTAAAAGATACTTAGGCACtttttttttttttttgagactgagtttcgctcttgtcatcctggctggagtgtgatggtgcgatcttgactcactgcaacctctgcctctcgggttccagcaattctcctgcctcagcctcccgagtagctgagattacaggcgcccgccaccatgcccggctaatttttgcatttttagtagagactgggtttcaccacgttggccaggctggtctcgaactcctgacctcaggtgatccaccgcctaggcctcccaaaACCATTAGGGCTCAGAGGAAGGTATCCCAATGAATATCAATTAAGGGCACTTTAATATATAAATTATAAACTAAGTTCTAAAAGGAAAATTAGTATTTTGGATAGATTTGTCAAAACGACATTTAAGTCATGTTTAAAAAGTCATTTGGGCAGTTCTGGAAACTAGTTTTAATACATTTGTTTTTTATGACAAAAAGTTTTATTTTAAATGTTAAAAATTGTCCAATCTGGTGAATGTCTAACCCTAAAGTTTAAAAATTTCTGCCTCCTAAGTTTATGTACCTTGTTtccatccatttaccacatatttccatctgatagtctagcaggtaattaaacttatatgtccaaaacca