Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Atp5c1
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
Also known as 1700094F02Rik|Atp5f1c
Coordinate chr2:10060841-10085321
Strand -
Gene summary Predicted to contribute to ATP hydrolysis activity and proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in mitochondrial ATP synthesis coupled proton transport. Predicted to act upstream of or within ATP biosynthetic process and ion transport. Located in mitochondrial inner membrane and myelin sheath. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Orthologous to human ATP5F1C (ATP synthase F1 subunit gamma). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5c1

Retroname Coord Strand Genomic Region ENSG
Atp5c1P3 chrX:50133181-50133848 + Intragenic
 ENSMUSG00000082556 UCSC
Atp5c1P2 chr13:77817043-77818634 - Intergenic
 ENSMUSG00000114809 UCSC
Atp5c1P1 chr2:10963782-10964431 - Intergenic
 ENSMUSG00000082871 UCSC
Atp5c1P4 chrX:76800837-76801858 - Intergenic
 ENSMUSG00000081164 UCSC
Atp5c1P5 chrX:87793084-87793401 + Intragenic
 ENSMUSG00000081673 UCSC

Expression

Transcript Sequences

>NM_001112738.1
GCTCACGAGATTTAGCGAGACCGAGGACGCAGGCGGAGCGGGCCGGGGCGCCTGAGCTCCCGCGCACGCGCACTGAGTCCCGTCTGCCCGACCTTCAAGGCTCCACCATGTTCTCGCGGGCGAGCGTTGTCGGGCTGTCGGCCTGCGCCGTGCAGCCGCAATGGTAGGACCACATCGGGAGGGATGCGGGGGCTCGGGCTTGCTGCGAGGCAGGAGGGATGGAGCTGCATGCTCACTCCTGGCGGAAGAAGGCCCCAGCTCAGGCCGCGGGGATGTCTGCAGAGCTGGAAGGTTGCGTGCCGGACCCCTGGTAGGGGTCAAAGAGAACAAGGTCACGGTctgatcccctgagactggaacGGCCATCCGGGACCTCGGGACCCGGACGGGATTCGGGTTGAGCTTTGGAGCCATCTGGGTTTCGATCAACTCCGTACTTCCGCTCCGTACCCGGGAGCACAGCTTGCAAAGTCTTTAGAAAGGCCCTGAAGGTGAAGGGGCGACCGGGGAACGTTTGGTTGTAACTTTTGGCTTTGAAGCCCTGTGAAACACTGCACGGGGGAGCAGCGTGACCCTTTAAGGTGTGATGGCTTGCTTGAGCTCTTTGGTAAGGCATTCACTGTGTAGCCATCCGACTCTTTGCTGGGTACTGGAGAAACGAAGGAACTCAAAATCAGCCCCCGCCTGAACCTGCTGGTCGCCTTGGTGCTAAAGGGGTTTAAAAAAATCTGCCgatgaggaagagaaagacattGCCATTGTCATCATGCCCTCGTGTTGAAGTACAATCTCTGCAAGGATCCAAGTTCGAAACATGGCAACTCTGAAAGATATTACCAGGAGACTGAAGTCCAtcaaaaacatccagaaaattacCAAGTCTATGAAGATGGTGGCAGCTGCAAAGTATGCCCGGGCTGAGCGGGAGCTGAAGCCTGCCCGAGTGTATGGGACAGGTTCTTTGGCTCTGTATGAGAAGGCTGATATTAAGGCACCTGAGGACAAGAAGAAGCACCTCATTATTGGTGTGTCCTCAGATAGAGGGCTTTGTGGTGCTATTCACTCCTCAGTGGCTAAACAGATGAAGAATGAAGTGGCTGCCCTCACAGCAGCTGGGAAAGAAGTTATGATTGTTGGAGTTGGTGAAAAAATCAAGGGCATACTTTATAGGACTCATTCTGATCAGTTTTTGGTGTCATTCAAAGATGTGGGACGGAAGCCTCCTACTTTTGGAGATGCATCAGTCATTGCCCTTGAGTTGTTAAATTCTGGATATGAATTTGATGAAGGCTCTATCATTTTTAATCAGTTCAAGTCTGTTATCTCCTAcaagacagaagagaagcccatCTTCTCTCTGAATACCATTGCGACTGCTGAGACCATGAGCATCTATGATGACATTGATGCTGATGTGCTGCAGAATTACCAGGAGTACAATCTGGCCAACCTCATCTACTACTCCCTGAAGGAGTCCACCACCAGTGAGCAGAGTGCCAGGATGACCGCCATGGACAACGCCAGCAAGAACGCTTCTGATATGATTGACAAATTGACCTTGACTTTCAACCGCACCCGCCAGGCTGTCATCACAAAGGAGTTGATTGAAATCATCTCTGGGGCTGCTGCTCTGGATTAATGAAAATCAAGTTGCATCCTCAGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTTGTAAATTATCTTACAATAAACAacttacaatgagaaaa
>NM_020615.4
GCTCACGAGATTTAGCGAGACCGAGGACGCAGGCGGAGCGGGCCGGGGCGCCTGAGCTCCCGCGCACGCGCACTGAGTCCCGTCTGCCCGACCTTCAAGGCTCCACCATGTTCTCGCGGGCGAGCGTTGTCGGGCTGTCGGCCTGCGCCGTGCAGCCGCAATGGATCCAAGTTCGAAACATGGCAACTCTGAAAGATATTACCAGGAGACTGAAGTCCAtcaaaaacatccagaaaattacCAAGTCTATGAAGATGGTGGCAGCTGCAAAGTATGCCCGGGCTGAGCGGGAGCTGAAGCCTGCCCGAGTGTATGGGACAGGTTCTTTGGCTCTGTATGAGAAGGCTGATATTAAGGCACCTGAGGACAAGAAGAAGCACCTCATTATTGGTGTGTCCTCAGATAGAGGGCTTTGTGGTGCTATTCACTCCTCAGTGGCTAAACAGATGAAGAATGAAGTGGCTGCCCTCACAGCAGCTGGGAAAGAAGTTATGATTGTTGGAGTTGGTGAAAAAATCAAGGGCATACTTTATAGGACTCATTCTGATCAGTTTTTGGTGTCATTCAAAGATGTGGGACGGAAGCCTCCTACTTTTGGAGATGCATCAGTCATTGCCCTTGAGTTGTTAAATTCTGGATATGAATTTGATGAAGGCTCTATCATTTTTAATCAGTTCAAGTCTGTTATCTCCTAcaagacagaagagaagcccatCTTCTCTCTGAATACCATTGCGACTGCTGAGACCATGAGCATCTATGATGACATTGATGCTGATGTGCTGCAGAATTACCAGGAGTACAATCTGGCCAACCTCATCTACTACTCCCTGAAGGAGTCCACCACCAGTGAGCAGAGTGCCAGGATGACCGCCATGGACAACGCCAGCAAGAACGCTTCTGATATGATTGACAAATTGACCTTGACTTTCAACCGCACCCGCCAGGCTGTCATCACAAAGGAGTTGATTGAAATCATCTCTGGGGCTGCTGCTCTGGATTAATGAAAATCAAGTTGCATCCTCAGACAAGAGGTAAAGAAGAAGAATGCGCAGGCTGATTTTAACTGATTGCTGTCTTTGTCAGAAGAAACTTGGTCCACTGAGTTACAAAGACAGCAGGATGTTTGTAAATTATCTTACAATAAACAacttacaatgagaaaa