Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Atp5pb
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATP synthase peripheral stalk-membrane subunit b
Also known as Atp5f1
Coordinate chr3:105850014-105866579
Strand -
Gene summary Predicted to enable proton transmembrane transporter activity. Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in mitochondrial ATP synthesis coupled proton transport. Predicted to act upstream of or within ion transport. Located in mitochondrial inner membrane and myelin sheath. Is expressed in several structures, including alimentary system; genitourinary system; heart; nervous system; and sensory organ. Orthologous to human ATP5PB (ATP synthase peripheral stalk-membrane subunit b). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5pb

Retroname Coord Strand Genomic Region ENSG
Atp5pbP3 chr11:55008819-55009621 - Intergenic
 ENSMUSG00000044751 UCSC
Atp5pbP4 chr15:83422544-83422696 - Intragenic
 ENSMUSG00000116217 UCSC
Atp5pbP5 chr18:88932961-88933211 - Intergenic
 ENSMUSG00000118089 UCSC
Atp5pbP1 chr3:157115652-157116730 + Intergenic
 ENSMUSG00000104555 UCSC
Atp5pbP2 chr9:96151872-96152051 - Intragenic
Intragenic
Intragenic
 ENSMUSG00000100382 UCSC

Expression

Transcript Sequences

>NM_009725.5
ATCTTGCTCCTGCCCCTGACAGGCTCGGGTCGGGGTCACAGGGACACGGAGCCCGCTGTCCCGCTCTTCGCAGACAATGCTGTCCCGGGTGGTGCTTTCTGCTGCCGCCACAGCGGCCCCGTGTCTGAAGAACGCGGCCGCCCTAGGTCCAGGGGTATTACAGGCAACAAGGGCCTTTCACACAGGACAGCCTCGCCTTGCCCCTCTACCACCTCTTCCTGAATATGGAGGAAAAGTGCGTCTTGGGCTGATTCCTGAGGAATTTTTCCAGTTCCTTTACCCTAAGACTGGTGTAACAGGACCTTATGTGCTTGGAACTGGACTTAGCTTGTATTTTCTATCCAAAGAAATATATGTGATTACCCCAGAGACCTTCTCTACCATATCAGTAGTAGGGTTGATAGTCTATGTGATTAAGAAATATGGCGCCTCTTTTGGAGAATTTATTGACAAACTTAATGAGgaaaaaattGCTCAACTAGAAGAAGTAAAGCAGTCGAGCATGAAACAAATCCAGGATGCAATCGACATGGAGAAGGCACAGCAGGCACTGGTTCAGAAGCGCCATTACCTCTTCGATGTGCAGAGGaATAACATTGCCCTGGCCTTGGAGGTCACTTACCGGGAACGGCTACATAAAGCATATAAGGAGGTAAAGAATCGCCTGGACTACCACATCTCTGTACAGAACATGATGCGTCGCAAGGAGGAAGAACACATGATAGACTGGGTAGAAAAGCATGTGGTGAAGAGCATTTCTGTACAGCAGGAAAAGGAGACCATTGCCAAGTGCATTGAAGATCTAAAGCTGCTTGCAAAGAAGGCTCAAGCTCAGCCAATTATGTGAATATGTCTTTCTCAGTTGTGATAGCCAGAGAGAGTTAAATGGGAACTAGTATATGTGAAGAACTCTTTCTGTATTGCTATCTATTGAAATAAAATGATCAAGGTCCACTTAGTGGCTTAACCCTATTGGCCAGTAAGGTATTTCTGATCCTTGCTCTGTATGCGGAGTTATCTGATCATAATTTGAATAAGCAACTTGCAGCAACTTGCTGCCCAACTGAAATTACCAAGTTATAATTTAAACTTGTAATTAACTAAAGCATCTTGCAATAAAATGTTTGAAACAGAA