Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp5g1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)
Also known as Atp5mc1
Coordinate chr11:95963619-95966520
Strand -
Gene summary Predicted to enable ligand-gated channel activity. Predicted to be involved in several processes, including ATP synthesis coupled proton transport; cellular response to L-glutamate; and negative regulation of mitochondrial membrane potential. Predicted to act upstream of or within ion transport. Located in mitochondrial inner membrane. Is expressed in several structures, including alimentary system; genitourinary system; hemolymphoid system; liver; and nervous system. Orthologous to human ATP5MC1 (ATP synthase membrane subunit c locus 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5g1

Retroname Coord Strand Genomic Region ENSG
Atp5g1P6 chr14:57024885-57025388 - Intergenic
ENSMUSG00000094250 UCSC
Atp5g1P3 chr2:93770577-93771295 - Intergenic
ENSMUSG00000083009 UCSC
Atp5g1P1 chr2:113916570-113916763 + Intergenic
N/A UCSC
Atp5g1P9 chr18:55850209-55850381 + Intergenic
N/A UCSC
Atp5g1P5 chr11:75318539-75319070 + Intergenic
ENSMUSG00000084224 UCSC
Atp5g1P4 chr11:100252233-100252983 - Intergenic
ENSMUSG00000091478 UCSC
Atp5g1P7 chr15:80836675-80837204 + Intragenic
ENSMUSG00000058357 UCSC
Atp5g1P8 chr16:60218187-60218704 - Intragenic
ENSMUSG00000087636 UCSC
Atp5g1P2 chr2:168825137-168825626 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001161419.1
GGGAGGTGAGTCAGTCACCTTGAGCAGGGAGTGTGCTGTGGGCCGAGCAGGGGCTGCAGGGGAGTGGGAGTGCAGATTGAAAAATGCAGACCACCAAGGCACtgctcatttctccagctctgATTCGCTCCTGTACCAGGGGTCTAATcaggcctgtgtctgcctccctcctGAGCAGACCAGAGGCCCCATCTAAGCAGccTTCCTGCAGCAGCTCCCCTCTCCAGGTGGCCCGACGGGAATTCCAGACCAGTGTCATTTCCCGGGACATCGACACAGCAGCCAAGTTCATTGGTGCTGGGGCCGCCACAGTTGGTGTGGCTGGATCAGGAGCTGGCATTGGCACAGTGTTTGGTAGCTTGATTATTGGCTATGCCAGGAACCCATCTCTCAAGCAGCAGCTCTTCTCCTATGCCATTCTGGGGTTTGCCCTGTCTGAGGCCATGGGACTCTTCTGTTTGATGGTcgccttcctcatcctcttcgcCATGTGAGGCTCCCTGGGGTCACCCAGCCGTccctgctgctttgactccatgCCAGTCCTGGTGCTGGAGTCTACTGAGCTTTaccattaaacaacaacaacaacaacaacaacgtttCTCTAAACcatgtgcctgtgcctgtcttTCTACCCCGGGGGTAGGCGGCGTCTTTGGAATGGTGAGAAGTGACACTTGGGTCAGCCTTGGTGATAAGGCAGAGTGTGGAAGGGTCCCACCGTCTCCCAGGAGGATATGAAATAGCCTGGGTAATGATGTTGGTGCTTTGTCACTTTCAAGTTTAGCATACTGACAGGTGC
>NM_007506.6
GGAGTGAAGGGACTCCGAACACGTGGGTGGGGGAGCTGAGCGCTCAGACCAAGGGCTAAAGCTGGGAGATTGAAAAATGCAGACCACCAAGGCACtgctcatttctccagctctgATTCGCTCCTGTACCAGGGGTCTAATcaggcctgtgtctgcctccctcctGAGCAGACCAGAGGCCCCATCTAAGCAGccTTCCTGCAGCAGCTCCCCTCTCCAGGTGGCCCGACGGGAATTCCAGACCAGTGTCATTTCCCGGGACATCGACACAGCAGCCAAGTTCATTGGTGCTGGGGCCGCCACAGTTGGTGTGGCTGGATCAGGAGCTGGCATTGGCACAGTGTTTGGTAGCTTGATTATTGGCTATGCCAGGAACCCATCTCTCAAGCAGCAGCTCTTCTCCTATGCCATTCTGGGGTTTGCCCTGTCTGAGGCCATGGGACTCTTCTGTTTGATGGTcgccttcctcatcctcttcgcCATGTGAGGCTCCCTGGGGTCACCCAGCCGTccctgctgctttgactccatgCCAGTCCTGGTGCTGGAGTCTACTGAGCTTTaccattaaacaacaacaacaacaacaacaacgtttCTCTAAACcatgtgcctgtgcctgtcttTCTACCCCGGGGGTAGGCGGCGTCTTTGGAATGGTGAGAAGTGACACTTGGGTCAGCCTTGGTGATAAGGCAGAGTGTGGAAGGGTCCCACCGTCTCCCAGGAGGATATGAAATAGCCTGGGTAATGATGTTGGTGCTTTGTCACTTTCAAGTTTAGCATACTGACAGGTGC