Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Atpif1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATPase inhibitory factor 1
Also known as ATP5IF1|Atpi|IF(1)|If1
Coordinate chr4:132257866-132262784
Strand -
Gene summary This gene encodes a member of the ATPase inhibitor family of proteins. This protein has been shown to negatively regulate the ATP hydrolysis activity of the F1Fo-ATPase. Knockdown of this gene is associated with reduced heme synthesis in differentiating erythroid cells. Misregulation of this gene has been found to lead to increased aerobic glycolysis in mouse cancer cells, while high expression levels of this gene have been correlated with gastric and liver cancer severity in human patients. A pseudogene of this gene has been identified. [provided by RefSeq, Apr 2015]

Retrocopy(s) from Atpif1

Retroname Coord Strand Genomic Region ENSG
Atpif1P2 chr12:116560868-116561306 + Intragenic
 ENSMUSG00000101814 UCSC
Atpif1P1 chr4:132529282-132529582 - Intergenic
 ENSMUSG00000081647 UCSC

Expression

Transcript Sequences

>NM_007512.4
AGTGTTGCCCTGGTTGTCTCCAGTCTCTGACAGAAAGAAATCTGTTGTCTCTGGATATACCTATTATTATTCTGGACATTTCCCATGGATGGAATCTACTTATACAAttcttatttaggtttttttcatgtgacagttttttggtttttttgacccaggatttctctgtgtagccttggttgtcctggaattctctctgtagaccaggctgacctcaaactcacagagatctacatgACTCCCTGGAGTGCTGGAACTGGCCTGGGTAACCACCATGTACCAGTTTTTTAAGAGTTTATCCCAGTGGAGCCTATCCTggtactccagaggcagaggtaggcagatcttctgagtttggggccagcctagtctctatagtaagtttcaggacagccaggcctgtgaaaaaaaaactgtcaaaaaaattttttttttttttactgcatttTATGGTGGCATCCAATTCCTCAAAGGTATGTCTATGCTATGATTTGTTGACCTCTTCAGTAGTTCAACATTTGGGGTCTTCTCACCTTTGGACCACTGTGAAATAGTATTATGAAGCTGGAcatatgcctgtaaccccaactctggggaggtggagacggAAAGATGAGAAATTGGCTTCTTCACtgcgagtttgaggccatcccGAGTTACAACAGATCTCATTGAGGGCTTGCCATCGtgtacatttttaataaaatcgACCTTTGGACGGAAATTGTGCAGTGGGAGTGAACGAAATGCCTCATTCTAAAGAGACCAAAAGCCAAGATTCATCTTTTGACTTCGCTCTGTAGACTCCTGGGTCATGATGCGTTAGAGCCTTGTTTATTAACTGTTAACTAAGGGATAAATCCGCCTCCCTCTCAACAAACGCTGCAGATATCATaagccccgccccctccctccTGATTCGCGGTTTCCGTGCTCGTCCCACCTCCCCGGCGTCTAGATTGGCAGTTCAGCCGCCCTCGCAGTTAGCGCGCTAGGAGAGAAGCAGCCACGCCCGCAACGCGAGCTGAGCAACGCCGAAGACAATGGCAGGCTCGGCGTTGGCAGTTCGGGCTCGGTTCGGTGTCTGGGGTATGAAGGTCCTGCAAACCCGAGGCTTCGTCTCGGACTCGTCGGATAGCATGGATACGGGCGCTGGCTCCATCCGAGAAGCTGGTGGAGCCTTCGGAAAACGAGAAAAGGCTGAAGAGGATCGGTACTTCCGAGAGAAGACTAAAGAACAGCTGGCTGCCCTGAGGAAACACCATGAAGATGAGATTGACCACCATTCGAAGGAGATAGAGCGTCTGCAGAAGCAAATTGAACGCCATAAGAAGAAGATCCAACAACTAAAGAATAATCATTGAATGCGCGCAGTCGGTCCCTCACAGAGTGGCCCGTATCACTCCCCACGTCTGTAGACACATGGCTTTGAATGATTACTATTTGGTCTGTGTGCTACTAACAGATAATAAACGATCACCAGGAAACTTG