Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atrn
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name attractin
Also known as Mgca|mg
Coordinate chr2:130734363-130872249
Strand +
Gene summary This gene encodes a widely expressed transmembrane glycoprotein that plays important roles in diverse physiological processes such as regulation of hair pigmentation, monocyte-T cell interaction and control of energy homeostasis. The encoded preproprotein undergoes proteolytic processing to generate a mature, functional protein. Certain mutations in this gene are responsible for the mahogany mouse phenotype of dark brown or black coat on a normally agouti background. Mice with loss-of-function mutations in this gene exhibit black coat color, tremor, adiposity, higher basal metabolic rate, juvenile-onset hypomyelination and age-dependent spongiform neurodegeneration of the central nervous system. [provided by RefSeq, Jul 2016]

Retrocopy(s) from Atrn

Retroname Coord Strand Genomic Region ENSG
AtrnP1 chrX:127451763-127452323 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_009730.3
AGGCGAAGGGGAGCCGGCGTGcggggtgtgtatgtgttcgcTGGGCGCCGGCTCAGCCCCAGGAAGatggtggcggtggcggcggcggcggcgactgAGGCGCGGCTGAGGGGGAGCACGACGGCGACAGCAGCGCCTGCGGGCAGGAAGGGCAGGCAGCACCGACCCTGCACCGCGACAGGGGCCTGGAGGCCGGGACCGCGCGCCCGGCTGTGTCTACCGCGGGTGCTGTCGCGGGCGCTGCCCccgccgccgctgctgccgctgctcttttcgctgctgctgctgccgctgccccGGGAGGCCGAGGCCGctgcggtggcggcggcggtgtCGGGCTCGGCCGCAGCCGAGGCCAAGGAATGTGACCGGCCGTGTGTCAACGGCGGCCGCTGCAACCCTGGCACCGGCCAGTGCGTCTGCCCCACGGGCTGGGTGGGCGAGCAATGCCAGCACTGCGGGGGCCGCTTCAGACTAACTGGCTCTTCTGGATTTGTAACAGATGGACCTGGGAATTATAAATATAAGACGAAGTGCACATGGCTCATTGAAGGACAgCCAAATAGAATAATGAGACTTCGCTTCAACCATTTTGCTACAGAATGTAGCTGGGACCATTTATATGTTTATGATGGGGACTCAATCTACGCACCTCTGATTGCTGCCTTTAGTGGCCTCATTGTTCCTGAAAGAGATGGCAATGAGACGGCTCCTGAGGTCACTGTCACTTCAGGTTATGCACTGCTGCATTTTTTCAGTGATGCTGCTTATAATCTGACTGGATTTAATATCACTTACAATTTTGACATGTGTCCGAATAATTGCTCAGGCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGCGCTGTTGAGTGTGAATGTTCTGAAAACTGGAAAGGGGAGTCGTGTGACATTCCTCACTGTACAGACAACTGTGGCTTTCCTCACCGAGGCATCTGTAATGCAAGCGATACCAGAGGGTGCTCCTGCTTTCCTCACTGGCAGGgtccTGGATGCTCAATTCCTGTGCCAGCTAACCAGTCTTTTTGGACTCGAGAAGAATATTCTGATTTAAAGCTTCCCAGAGCCTCTCATAAAGCTGTGGTCAATGGAAATATAATGTGGGTTGTTGGCGGATATATGTTCAACCATTCAGATTACAGCATGGTTTTAGCGTATGACCTGACTTCTAGGGAATGGCTTCCACTAAACCATTCTGTGAACAGTGTGGTTGTAAGATATGGTCATTCTTTGGCATTACATAAGGATAAAATCTACATGTATGGAGGAAAAATTGATTCAACAGGGAACGTGACCAATGAGCTGAGAGTATTTCATATTCATAATGAATCATGGGTATTGTTAACTCCGAAAGCTAAGGATCAGTATGCAGTGGTTGGACACTCAGCACACATTGTTACACTGGCATCTGGCCGTGTGGTCATGTTGGTCATCTTCGGTCATTGCCCACTCTATGGATATATAAGCGTTGTGCAGGAATATGACTTGGAAAAGAACACATGGAGTATATTACATACTCAGGGTGCTCTTGTGCAAGGGGGTTATGGCCACAGTAGTGTTTATGATGACAGGACCAAGGCTCTGTACGTTCATGGTGGCTACAAGGCTTTCAGCGCCAACAAATACCGGCTTGCAGATGACCTCTACAGATACGATGTGGATACTCAGATGTGGACCATTCTTAAGGACAGCCGATTTTTCCGTTACTTGCATACAGCTGTGATAGTGAGTGGAACCATGCTGGTGTTTGGAGGGAACACACACAATGACACTTCCATGAGCCACGGTGCCAAATGCTTCTCCTCAGACTTCATGGCTTATGACATTGCTTGTGACCGATGGTCAGTGCTTCCCAGACCTGAGCTCCATCATGATGTCAACAGATTTGGCCATTCAGCAGTCTTGTACAACAGcacCATGTATGTGTTCGGCGGCTTCAACAGCCTCCTCCTCAGTGACGTCTTGGTCTTTACCTCGGAGCAGTGCGATGCACACCGCAGTGAAGCTGCTTGTGTGGCAGCAGGACCTGGTATCCGGTGTCTGTGGGACACACAGTCGTCTCGATGTACCTCCTGGGAGTTGGCAACTGAAGAACAAGCAGAAAAGTTAAAATCAGAGTGTTTTTCTAAAAGAAcccttgaCCATGACAGATGTGACCAGCACACAGATTGTTACAGCTGCACAGCCAATACCAATGACTGCCACTGGTGCAATGATCACTGTGTCCCTGTGAACCACAGCTGCACAGAAGGCCAGATCTCCATTGCCAAGTATGAGAGTTGCCCCAAGGATAACCCCATGTACTACTGCAATAAGAAAACCAGCTGCAGGAGCTGTGCCCTAGACCAGAACTGCCAGTGGGAGCCCCGGAATCAAGAGTGCATCGCCCTGCCGGaaaatatctgtggCAATGGCTGGCATTTGGTTGGAAACTCGTGTCTGAAAATCACTACTGCTAAGGAGAATTATGACAATGCTAAATTGTCCTGTAGGAACCACAATGCCTTTTTGGCTTCCCTCACATCCCAGAAGAAGGTGGAGTTTGTCCTTAAGCAGCTTCGATTAATGCAATCATCTCAAAGTATGTCCAAGCTCACTCTGACTCCATGGGTTGGTCTTCGGAAGATCAATGTGTCTTACTGGTGCTGGGAGGATATGTCTCCATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGAGCCCAGTGATGCTGGCTTCTGTGGGATCTTGTCAGAGCCTAGTACTCGGGGATTAAAGGCTGCAACCTGCATCAACCCTCTCAATGGCAGCGTCTGTGAAAGGCCTGCAAACCACAGTGCCAAGCAGTGCCGGACACCATGTGCCCTGCGGACAGCGTGTGGCGAGTGCACTAGCAGCAGCTCGGAGTGCATGTGGTGCAGTAACATGAAGCAGTGTGTGGACTCCAATGCCTACGTGGCCTCCTTCCCTTTTGGCCAGTGTATGGAATGGTATACGATGAGCAGCTGCCCACctgaaaatTGCTCTGGCTACTGTACCTGCAGCCATTGCTTGGAGCAGCCAGGCTGTGGTTGGTGTACTGATCCTAGCAATACTGGGAAAGGAAAATGTATTGAGGGCAGCTATAAAGGACCTGTGAAGATGCCGTCACAGGCCTCTGCAGGAAATGTGTATCCACAGCCCCTTCTGAACTCCAGCATGTGTCTAGAGGACAGCAGATACAACTGGTCTTTCATTCACTGTCCAGCTTGCCAGTGCAACGGACACAGCAAATGCATCAACCAGAGTATCTGTGAGAAGTGTGAGGACCTGACCACGGGCAAGCACTGCGAGACCTGCATATCTGGCTTCTATGGTGACCCGACTAATGGAGGCAAATGTCAGCcaTGCAAGTGCAATGGGCACGCATCACTGTGCAACACCAACACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCCAGCTATGTGAGGTAGAAAATCGATACCAGGGAAACCCTCTCAAAGGAACATGCTACTATACCCTTCTCATTGACTATCAGTTCACCTTTAGCCTGTCCCAGGAAGACGACCGCTACTACACAGCCATCAACTTTGTGGCTACTCCTGATGAAcaAAACAGGGATTTGGACATGTTCATCAATGCCTCCAAAAACTTCAACCTCAACATCACCTGGGCCACCAGCTTCCCAGCCGGAACCCAGACTGGAGAAGAGGTGCCTGTTGTTTCAAAAACCAACATCAAGGAATACAAAGATAGCTTCTCTAATGAGAAATTTGATTTTCGCAACCATCCAAACATCACTTTCTTTGTTTATGTCAGTAATTTCACTTGGCCCATCAAAATTCAGATTGCCTTCTCCCAGCACAGCAACTTCATGGACCTGGTACAGTTCTTCGTGACTTTCTTCAGTTGTTTCCTCTCGCTGCTTCTGGTGGCTGCAGTGGTCTGGAAGATCAAGCAGAGCTGTTGGGCATCCAGGCGGAGAGAGCAACTTCTTCGGGAGATGCAACAGATGGCCAGCCGCCCCTTTGCTTCTGTAAACGTTGCCTTGGAAACAGATGAAGAACCTCCTGATCTCATTGGGGGAAGTATAAAGACCGTTCCTAAGCCCATTGCCCTGGAGCCCTGCTTTGGTAACAAAGCCGCAGTCCTCTCTGTATTCGTGAGGCTCCCTCGAGGACTGGGAGGAATCCCTCCTCCTGGTCAGTCAGGTCTCGCTGTGGCCAGTGCCCTGGTGGACATTTCTCAGCAGATGCCAATAGTGTACAAGGAGAAGTCAGGAGCTGTAAGAAACCGGAAGCAGCAGCCGCCTGCACAGCCTGGAACCTGCATTTGATACTGGGGCAGGAATTCGCCCTCACAGAGGGCGTGTGGTCCACGAAGCTGTCTACAGGGGAGGctgcaggcaggaagcaggcGTGGGGCAGAAGACTGGGGACCCTTGAAGCGTCCAACTCATGTGCATGATCATGCAAGCTGTTTTCATGGCTCACCCCTCTGTGTCCAGCATCTAACCTTTTACTTCTGTGTAGGAAATAATTTAATTACAAGTCCAGGAATGGTCTGCTCTACTCATGGGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCCTTGTGGAAGCCTCTCTTGGGAATCTCAACTGCAGAGGAGCTGCCCTCTGTCAGCAGCTCTCCAGCATGGTCCTCTGACACTCCTCAGATGAACTGTTCTCATCGGAAGCTTGCTGTCTTTTTACAAGATGAGCTTTTACTCTCTTCCAGGAAGTAGCTTTTTTTCTAGCTGAGAATTAATAATGGTCTTTCTCTTTGGAAGTCATATCAAAGTATAATTGATGggggccttgttttgttttgttttggtttttggagacagggtctcactgtgtagtcctagctggcctggaactcactatgtagatcaggctggactgaactcacaaagatccacctgcctctgcctcacaaatgctgggatAAAAAGCATGAACCACCAGGCCCAGCAAAGAGGGCTATTCTAAATGTCAAGGTCAATGGAGttagaatatatataaaaaaatgcaATTGATAATTCTCTATAGAAACTTGATTAATTTTAAtccattctttccttctctttctctcactctgtcttacacacatgcacacatacacacacactaagtgcCTAGACTTTGAATAGATCTAGCAATTGGACATTAGTAAGCCTAAGTTTTTACATGATTGCATTCCTACATTCTTGTAAACTTTAAGTAACTACCATTgcagtttgttctttttttaaagtctaaTTTGCAGCCAAGAACGAGTAATTCTCACCCCAAGCAACATCTAATAGGGACTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACCCTCGGCTCTTGCCAAGGCACCACAGAATGCACTTGCTCATGCCCTGTGCCTCTTGAGCAGAAAAGAGCACTGACAACTGGGACACCTGGCTCTGTCTTCCTACAGCTGCTCGCACTGACCTGTGGGAACCTGTGGGTCATCCCCAGGCTGAATGGAgtacacactagaagagggatGATGCCTAGCATTGGGGCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGGAGTTGGTCCAGCCTCCTCCCAGACCCAGCTGGTGGCTGTGAGGAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACAAGATTACCACGTTAGGAGGGTGAGCAGCCCTCTGCTATGTGCCCAGGACCCTGCCTGGACATTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCTGTCCTCTCCTTCTTCATGTCCTACAGTTCTGCTATCACCTGACTAGAATAGCCCTCTAGGCAACAGTGCTCAAATGTATGAGTTTGGAGAAGTTAACAATCAGAAGAACAAAAACTGTAGTGTTTCACCTTTAAATGCAGTGTTGAAGAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTGGAGTGACAGTTCCAAGCTGAACCATAAATCACTGATGCACAAAACACTGCTAGAAGGCTCACCTCTCAAAACACGACTCTTTGCATCACTATTAAAGagcagaaagttctagaaatgaTCCCAGCCTCATCCCCTATACAGTTAGGAGCTCCCCACATCTCTACCAAAACCCAGCACATAAGTATCTGCGTGGTCTAGCCTTTCATCTCCGTAACAAGCCAGGGGACTCTtggccaaaagaaagaaagggaagttgCACTAGGGCTTGTCCGTCCATAAGGAATTCCCCTCTGCTTTGCTCAAAGGACCAAATTTCTTTGGCCAAAGAAGTTGCTTCTATGTTAGTCCCATACCCTGAAGTAATATGTACCATGGCTCCCACCTACCTGTTTATGCTCTCCCTGCCCCCAGGGAaactgtttattctttcaaaagaagcaaacagcgttcatttctgctcctgtaatgGAGAAACAGCCAGCTCCCCTGCATCCCTTACAGCCAACAGCTCCCTTCAGGCTTAGAGCAGGGGGAATGGCAGGGATTAAGAGCTCAGCTCAGAGCCAGTTACCAAGATGGAATGGAGTTGTGACCCAGTAACTGTGTCACGAGAGACCATGTATATAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAGTGTCCAGAATGTTCAGACATTCAGGGTGTACATAAACAGAAGAGTAtcataatgtatttttattaaacacTAACATCTGAGTTTCACCTAATCTGTTTCTGTGCCATATACTGGGTATCCAAGCTCTGGGAAGTTATCCTACCAGGCCCTGATCTGTTGATAAGGCACTATACACCATGCTGGTGTGTTCTGTAGCCTTGTGCCCATTAGGTAACTGAACAATGATTCAGCTCTTAGAATACCTAGGAAGACAGCAAGCAGGGTGACACACGGCTGTGATCTaagcattcagaagacagaggcaggaagaaaattcaaaaatggggctggagagatggctcagtggttaaaagcactggctgctcttggtcAGGAcactagttcagttcccagtacccacatggtggctcacaaccttctgtgacTACAGTTCCAGATaacctgacaccctcctctggcctcctcggGTGCCTGTGGTGGTCCACCTGGTGCACAGACAAACACccaatacacacaaaacaaaagtaactcaagaatagcctgggctacatagcaagagcctgtctcaaaacaaacgaaCCTATGAAGAGCCAGGCAGTCTATCTATTTACATGGCAGTATACTAGAGAAACTCAGGAAGCAAGAGTGTTCATCACTGTTGTAATTTCAAATGCTCCTTGTGATTTCTGGCATCTCTGTGGGGTGAGGTGTTCTGTTACTCTTCACATTCAAAGACTGTCACCCATGAACGTCAGACTTTGCAAAGGGGCTCTCTAAGCTGCACTGTTGTGGCTTTGTCTAAAATTTTAATGACGTTTCTGAGAACCATGTTCTTTTTATACTAAAATCTGGGGATGGGAGGGCTCATTTGTTGATAAATAGCACTATTTTCCCACACCTCAGCCTCCTGTCCCCGTCCTGGTCTTCCCTACACAGTCTGGAGAGGGCTCTGAAAGGTCCACAGAGTTTGACAGACACGAAAGCAACCCATTGCCCCGTTGACCTGACCTGGAAGAAGACTGTCAGCAAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAGAAAAGCAGAGCGCCTCTGGTAGGTGACTCTGCAGCCTGCCAGCGCCCGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTTGGGGGATGGTGCTGTTTTTATGAAAACCTCTGATCCTTGGTGTCCTTTAATTGATctgttcaacaaatatttactaaacACTTCTAAGCTAACATTAGGGCAGTGACTGAGGTGGAAACCCAGCTCTTTAGACAGCTGTCATCCTAGGATAGCTTCCTGGAAGCAGAACCAAGAAGCCAGAAGGTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGTCACAACCTCCCAGCACAGCTTTGGAATGAGACATCAGCCTGGCCTCCAGCAGAGCAGAGGCTCTGGAGCTCCACATCCTGCCTGCAGGGAGCCCTCAGGGTGCCCTCCAGAGTACAGGGAGAAACTAAAGGCAATAACAGAAGCTGCTCTCAGAGCCTGACTGTGCACAAAACACTAGTGAAGCCTGCTGAACTAATTCTGCCTCTGGAAATCTTTTCTGGTTCTTTacagtttgttgttttgttttgatccaAGCTTAGTTTGTTACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTGTAAACTATTTAATTGCTGCGATTGTTGGGTTATACATACATTTAGGACTGcaattttttggtattttttgtaTTGTAAAATAACAGCTAATTTCATCAGGAACAAGAGAATTAAGGGGGTCTGCATTTTAAATGCAGATGTGAAGCACttgtatataaataaaagtaaatactaTAATACAAAGTTCCTTCTGAAATAAAAGTAGATCTGGTAAAAA