Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps20
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S20
Also known as -
Coordinate chr5:16706052-16707214
Strand -
Gene summary Predicted to enable MDM2/MDM4 family protein binding activity and ubiquitin ligase inhibitor activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in positive regulation of signal transduction by p53 class mediator. Part of cytosolic small ribosomal subunit. Orthologous to human RPS20 (ribosomal protein S20). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps20

Retroname Coord Strand Genomic Region ENSG
Rps20P1 chr1:1888846-1889286 - Intergenic
N/A UCSC
Rps20P2 chr1:35401657-35402119 + Intergenic
N/A UCSC
Rps20P3 chr3:111455777-111456254 + Intergenic
N/A UCSC
Rps20P4 chr3:22964229-22964732 + Intergenic
N/A UCSC
Rps20P5 chr4:179239276-179239718 - Intergenic
N/A UCSC
Rps20P6 chr5:105296878-105297322 + Intergenic
N/A UCSC
Rps20P7 chr5:135687417-135687927 + Intergenic
N/A UCSC
Rps20P8 chr5:152070594-152071096 - Intergenic
N/A UCSC
Rps20P9 chr5:161889229-161889731 + Intergenic
N/A UCSC
Rps20P10 chr5:39448947-39449453 - Intergenic
N/A UCSC
Rps20P11 chr5:59113383-59113886 - Intergenic
N/A UCSC
Rps20P12 chr6:53362554-53363054 - Intergenic
N/A UCSC
Rps20P13 chr7:23952613-23953114 - Intergenic
N/A UCSC
Rps20P14 chr8:93439635-93440037 + Intergenic
N/A UCSC
Rps20P15 chr9:1012060-1012562 - Intergenic
N/A UCSC
Rps20P16 chr11:28810498-28810997 - Intergenic
N/A UCSC
Rps20P17 chr11:30351878-30352193 - Intergenic
N/A UCSC
Rps20P18 chr12:31805021-31805512 + Intergenic
N/A UCSC
Rps20P19 chr12:40685859-40686364 - Intergenic
N/A UCSC
Rps20P20 chr15:14806145-14806442 + Intragenic
N/A UCSC
Rps20P21 chr15:41730398-41730907 - Intragenic
N/A UCSC
Rps20P22 chr16:66701904-66702402 + Intergenic
N/A UCSC
Rps20P23 chr19:39655315-39655792 - Intergenic
N/A UCSC
Rps20P24 chr19:43154441-43154921 + Intergenic
N/A UCSC
Rps20P25 chr19:941646-942121 - Intergenic
N/A UCSC
Rps20P26 chr20:8484304-8484706 + Intergenic
N/A UCSC
Rps20P27 chrX:144239261-144239704 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001007603.2
CTTTCCGAGACCTGTGGTGCGTGCTGTGGAGCCTTGTCAAGTCTGCTCTGTCCTGACTCACCGCTGTTCGCTCCTGCTGAGGAACAAGTCGGTCAGGAAGCTACGCCTCAGCCATGGCATTTAAAGATACCGGGAAGACTCCCGTGGAGCCCGAAGTGGCGATTCACCGGATTCGAATCACGCTCACCAGCCGCAACGTGAAGTCGCTGGAAAAGGTTTGTGCGGACTTGATCAGAGGCGCAAAGGAGAAGAATCTGAAAGTGAAAGGACCAGTGCGCATGCCTACCAAGACACTGAGAATCACTACCAGAAAAACCCCTTGCGGTGAAGGTTCCAAGACGTGGGATCGTTTCCAGATGAGAATCCACAAGCGACTCATTGACTTACACAGTCCTTCAGAGATTGTTAAGCAGATTACTTCCATCAGTATTGAGCCTGGAGTGGAGGTTGAAGTCACCATTGCAGATGCCTAAGTCAACTGTTTAAATAAATTGACTTAATTG