Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cab39
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name calcium binding protein 39
Also known as MO25|MO25alpha
Coordinate chr1:85721148-85779298
Strand +
Gene summary Predicted to enable calcium ion binding activity; kinase binding activity; and protein serine/threonine kinase activator activity. Acts upstream of or within activation of protein kinase activity. Predicted to be located in cytosol and membrane. Predicted to be part of protein-containing complex. Predicted to colocalize with Z disc. Is expressed in several structures, including clavicle; cranial ganglion; dorsal root ganglion; neural retina; and secondary oocyte. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Orthologous to human CAB39 (calcium binding protein 39). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cab39

Retroname Coord Strand Genomic Region ENSG
Cab39P1 chr7:4177745-4180208 - Intergenic
 ENSMUSG00000082782 UCSC

Expression

Transcript Sequences

>NM_001355047.1
GGCCCGGCCAGCTGTCACTCCCGCCGCTCCGGGGACTCCGAGCACCTAGCCCTGGGCTCCGCGTAGCCTCACTGTTAGCGGGACGCTGACACTATCTTTGTAGGGGACCTTTCAGGAAAATGCCTAACTGATTTCTGGCTAGGAATTGTGCGTTCGGCGCGTTCCCGGGTTCGGTTGGAGCAATCCAAAACGCCGACTGCGTGCCGGTGCCGGAGCGACTCCGAGTAAGatctagctgctgctgctgctgctgctggtggtggtggtggtgaacgcTTTTAGCCTCTGCACTTTGGAGACGGAGgagggccaggccaggccaggccagccgGCTAGATCACAGTCAAGCAGGTAGAGTGCCGTGGAAGCCTCTGGCGCTGCCGTCATGCCGTTCCCATTTGGCAAGTCTCACAAGTCTCCGGCAGATATTGTGAAGAACTTGAAGGAGAGCATGGCTGTTTTGGAAAAGCAGGACATTTCTGACAAAAAGGCAGAAAAGGCTACAGAAGAAGTTTCCAAAAATTTGGTCGCCATGAAAGAAATTCTGTACGGCACCAATGAGAAGGAGCCTCAGACAGAGGCGGTAGCTCAGCTGGCTCAGGAGCTGTACAATAGCGGGCTCCTCGGCACCCTGGTAGCTGACTTACAGCTCATTGACTTTGAGGGCAAAAAAGACGTGGCTCAAATTTTCAACAATATTCTCAGAAGACAAATTGGTACAAGAACTCCTACTGTTGAATACATCTGCACCCAACAGAATATTTTGTTCATGTTATTGAAAGGgtaTGAATCTCCAGAAATAGCTCTTAATTGTGGGATAATGTTAAGAGAATGCATCAGACATGAACCACTTGCAAAAATCATTTTGTGGTCAGAACAGTTTTATGACTTCTTCAGATATGTTGAAATGTCAACATTTGACATAGCTTCAGATGCATTTGCTACATTCAAGGATTTACTTACAAGACATAAATTGCTCAGTGCAGAATttttggaacaacattatgatagATTTTTCAGTGAATATGAAAAGCTACTTCATTCAGAAAATTATGTGACAAAGAGACAGTCACTGAAGCTTCTGGGTGAGCTGCTGTTGGACAGACACAACTTCACAATTATGACAAAGTACATCAGCAAGCCTGAGAACCTCAAGCTAATGATGAACCTCCTCCGAGACAAGAGCCGCAACATCCAGTTCGAGGCCTTCCACGTGTTCAAGGTGTTTGTGGCCAACCCCAACAAGACGCAGCCCATCCTAGACATCCTCCTCAAGAACCAGACCAAGCTCATCGAGTTCCTCAGCAAGTTTCAGAACGACAGGACCGAGGACGAGCAGTTCAACGACGAGAAGACCTACTTAGTCAAGCAGATCAGGGATTTGAAGAGAGCCGCCCAGCAGGAAGCCTAGTGTCTACTCAGCCCCGGTCCCATCCAAGCTCAGCACTGGCTGTCAGCTCCTCAGCATCAGGCACTCTCATCGGTTCATGGGGAGCACTACTGCTAATCTGCTGTTAAGTGAACGGTTTTTCattttacctttttgtttttcagtccAGGTTGGAGAACGTAGCTGCTGCTGCTTGCACATTAGAGCGCACGTGGTCTTTCTTTCCCTTGATCTCTGTGTCATTTCAGAACTCACAGACTCCATTTGCTACAGGAGTTCTGAACATGGCTGGGTTCATGAAAGCAAATGAGAGTGAGAGTGGTCTAGGGAAAAGACGGTGATACATCGCTGACACCTGCCCGTCCATCGGCACTGCTCTCTGCAGGTCTGTGCAGTATGGCACGGGCATACCCACCATCTCTGCCGAAGGAAGATGGCGCATACAGGGATTGTTGGAGAACTGTATCCAGTGTGAGCTTTGGGGAGGATAAAGTTGGTGTGCAAATAAATTGATACTGAAGCTTAGCAACTTGTCAAGTGTGGAGCTTCATAAGGTCATAAGAAAGTGTATATATGCTTTTTCACAGCTTTCTAGAACTTTGTGACATTTGATTTTCTTGAAACTTGTAAACCTGGATAGGTTGAAGGgtgttttaattttacttttgaaggtGTTTTAAAACAGTAGAGCTAGCAGCAACACCTTATGTTTCATTTCAACACTGCTTACAGGTTTCTTTTGTATATAATTCTTAGAATGCTCATTTCTTTTAAATCGTTTAATTTGTACAGCAGAGGAATGTTATTGTAGTAGTATGTAACTATTACCTGAGTTttgcaacaaacaaaaaacaaaaaaaagaatgctcATATGTAATTGAAATACTTGAGATTACATGAAAATGCTGATTTTAACATTTAAGGATCAcagcattaaaagaaaaagaaccaatcCCTTGTATTCAGTTACCCAATGGGGCGCCGTTGGCAGGCAGAACTACATACCTGGAACTCTGTCTGCTACATATTCTTGCAGAATATTGGCCTTATTCATTTAAAATGAGTCCTAAGGTTGCCATATCTATGAATGATACAGATTATGCTAAATAatgctggtttttttgttttgttttgttttgtttgtgagggACCTCCTATAGAGCACCGTTTCTTTCTTAGAGTAATATCCAGTACAGTAGCCGAGTAACTGAATAATTCTAACTTTGGCTTCTCTAAGGGAAAGAAGAGCCCTGGTCCTGATGTCCTGGGAGAGATGGATGGGTTTAATGTCCTTTTCCTTAATGCTGCAGATGATCAGTATTTATAAAGTAACCGATTTTGCACCACTTTTTGTGACTGTGACCACAGCAGAACAATGTCTCCTAGACTGTATCTACATAAAGTTACTAGaatggtgtctgtctgtcttagtgACACACGGATCACAACTAACAACTTAAAATCAGAGTTTGCCCGATCCAATTCAGCATGGCTGTAGCTGACTAAAAAAATTTACATAATTATTCTTTGTTAGCCTCTCTTACTAACTGAATTATTCATTGGCCAGTAAAAGGAGCCTCCTAGCTGACGTTTTAGCAGGTTTTAAGGTTTCCTTCAAGGAATACAAGTCAGAAAAACCACTCCAGAAAATATAGGTCTGTTCTATTTCATCTAAATGGCAGTCTACAGTAAAGGGTTTCCAAGGCTCTCTTTACCCATGTGCGTGCGTGTATAGTTGATGGTCTCTAGTAGAGATAGAGAAAGCATTCAGGCTTCTGGACAAGGACATTCTCAGCTGGGTAGTGTGCAGACTCAGCTGTGCTAAGTGACCCAGTCCTTGCCACCGCGTTGTGAGTCAGGATTTGGTGACAGAGTGGCCATTTCACCAAGTGGAAGGAGTGTCTCTTTGCCAAGCTAGCTCTTAGAACTTGAGACAACAGAACAGTTTCCACTTGGGCTAACACAGAGAGCGGTGCTAGAGtcttgctgtggaagatgggATGCAGTGTGTCAGGGAACTGTCACTCACACATTGGAAGCTGAGGGCTGAGAAGGCTTTCTGGATTGTTTTTAAACAGAACAATGTGAAAACATTCAAGATTGAAAAGTTGCATTTAAAGTGTGATCACTTTCTAGGTTCCTATTACCAGAACGATTATCCTGGGTGTGGTTTCTTTGGTGTTATAAAGGGTTAATTTTACTTAAGGCAGTTacttaatgtgatttttttttttttaacccttaaAAAAAGTGGGAGATGTATACAATTGTTAATGACATGAAAGTGTTTCCTTTCTCCTGAGGAAAAGTGAATTTCTTATCAGAATATCTGGCTGGCCctgtaatttaaattaaaataaaattttggagAAACTGT