Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cacybp
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name calcyclin binding protein
Also known as SIP
Coordinate chr1:160029937-160040462
Strand -
Gene summary Enables protein domain specific binding activity and ubiquitin protein ligase binding activity. Acts upstream of or within cellular response to leukemia inhibitory factor. Located in cytoplasm and nuclear envelope lumen. Part of SCF ubiquitin ligase complex. Is expressed in several structures, including alimentary system; genitourinary system; liver lobe; nervous system; and sensory organ. Orthologous to human CACYBP (calcyclin binding protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cacybp

Retroname Coord Strand Genomic Region ENSG
CacybpP3 chr10:63248687-63250150 + Intergenic
 ENSMUSG00000112572 UCSC
CacybpP4 chr13:19710086-19711591 + Intergenic
 ENSMUSG00000113251 UCSC
CacybpP5 chr16:17520645-17522100 + Intragenic
 ENSMUSG00000116561 UCSC
CacybpP1 chr2:26612414-26613176 - Intergenic
 ENSMUSG00000082951 UCSC
CacybpP2 chr2:82374260-82374865 - Intergenic
 ENSMUSG00000083804 UCSC

Expression

Transcript Sequences

>NM_009786.2
AGCCTGGGGGCGGGACTAGACTCGGAGGGGCGGGGCCTTGGGAGGCTCCGGTGGAGCCTTGCGAAGGTTCCAGAGCCGTCTCGTGCGGAGGGCGGGCCGCCGTGTCGCGCCGGGTCTGTGGAGCTCGCTGCCGGCGCTGCGACGCTCGTGGGTGGCGTGTTCGGCTTTTCCTGTCTGCTTCGGTGCACCGCTGCAGCTCCGGCCTCGGGTCTGACGCGCGACGGCATGGCTTCCGTTTTGGAAGAGTTGCAGAAAGACCTAGAAGAGGTCAAAGTATTGCTGGAAAAGTCCACTAGGAAAAGACTACGTGATACTCTTACAAGTGAAAAGTCCAAGATTGAGACGGAACTCAAGAACAAGATGCAACAGAAGTCGCAGAAGAAACCAGAACTTGATAATGAAAAGCCAGCTGCTGTGGTTGCTCCTCTTACAACAGGATACACCGTGAAAATCAGTAATTATGGATGGGATCAGTCAGATAAGTTTGTGAAAATCTACATTACCTTGACTGGCGTCCATCAGGTGCCCACTGAGAACGTGCAGGTGCACTTCACAGAGAGGTCATTTGATCTTCTGGTAAAAAACCTCAATGGCAAGAATTACTCCATGATTGTGAACAATCTTTTGAAACCTATCTCTGTGGAAAGCAGTTCAAAAAAAGTCAAGACTGATACAGTAATTATTCTATgtagaaagaaagcagaaaacacaAGATGGGACTACTTAACACAGGTGGAAAAGGAATGCAAAGAGAAAGAAAAGCCTTCCTACGACACGGAGGCAGACCCTAGTGAGGGATTAATGAATGTTCTAAAGAAAATTTATGAAGACGGAGACGATGATATGAAGCGAACCATTAATAAAGCGTGGGTGGAATCCAGAGAGAAGCAAGCCAGAGAAGACACGGAATTTTGAGGCTTTTAAAAGTCCGTATGggaactgtgatgtggaatgCTCGTGTTCCAGTAAGGGGATGTTGTTGAACTGCACATATTTGTTCATGTGGGTATGTAGTTTTGACAGATAAATATTTACACCGCCTTTTAAGTAAAGATAGCAGATTCTCCATTTCTTACTGGAGGAtttgatttaaataaataagcttATTAAACTGTTTCCTTCATTAGCACCCCAGACATTTCGTTTCAGAAAAGGCTATATGGCACTCTTACTGAAAATGTAAAAAGGAAGTCTTGCATAATGAAAATGTTATGTCACAGACTTTTGTTCTGGCTGGGAGATAGAATACAGAAGTGTTTGTCTGTAGTTGACATTAGATCCCAGTAAtgtaaacaataaagcaaaatttTTGCATAAAATTCAAATTTGTGCAAAGTTACTACAGAGCTGTTCCATTATTACCATGTGTTACCATATACTGCTAATTGATTTAAGTATActtatgaatataaaattaaacaaaatacaaaggaCAAAAATAGACAAACATCGTGTTGATAAGTACTATCATGGTTCAGATGGCTTAAAAATAACCATGACGCGAAAACTTGAAAACGCCCATTTATTCCTTTGTTCAATAAAGTTGGAGTTTTACTTAAAAGATGAGTTCTGCAATCTGTTTTGAGTGTATTCAAAGTTAAGCTTTGTCACTGTACTCGAGTAAGTTTCAGAAAGCCGTAAGGGCTTAGCAATGGCTTAGCTGTTAAATGATAGGCTCACCATCAAAAAGAAAGCAATTAGATGCCTAGAAAAAAAGCCAGTCGATCACAACAACTACCATTAAGGATTAGGTAAAAGTCAGAACTTACAATTAATGTATAGAAAGGGTAGCTGGAAGTGTATTGAGCTGTGAAGTAAGCAGACTGGTAAACACATGAACTTATTGCATGCAGGAGATTTGGCGTTTGTAGGGAGATGAAGCATTAATGATAGCAGTGTAATAAGACAGCCATATGCTCACACTTACAGCATCTAAGATCTCACTGTCAAAAATAAAGTTATGCAAGTACTTAAAGAGATGGAATTCCATTATGACCTAGGACTGGGGAAGAAGTcttgatttaaaaagtaaaaggaaaataCATGGCAAAAAAATACACATAAGCACAAACCAATGACCTACTAAGGTTTCCAGTAACTATAAATCAttcatag