Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cbx1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name chromobox 1
Also known as Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1
Coordinate chr11:96679506-96699808
Strand +
Gene summary Enables identical protein binding activity. Acts upstream of or within negative regulation of transcription, DNA-templated. Located in chromocenter; pericentric heterochromatin; and pronucleus. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Orthologous to human CBX1 (chromobox 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cbx1

Retroname Coord Strand Genomic Region ENSG
Cbx1P1 chr8:15927563-15929750 + Intergenic
ENSMUSG00000109757 UCSC
Cbx1P2 chrX:163246128-163251387 + Intergenic
ENSMUSG00000081931 UCSC

Expression

Transcript Sequences

>NM_001362561.1
GCAGTGCAGGCGGCGGGCCGCGCAGAGTGAGAGGCTCTTTTGTTCGGCTGAGGGGAGGGCCGTTAGCGGGGCCTGCGGTACGCCGCTTCAGCGGGACGGTCGACTTGTGGCCACACGGCTCTTTGCTCCTCTGGGCGCGCTACTCCCCTCGGACCGCCCGACGCAACGCGCGAGTAGCGCGGCACCGATTCCTCTCGGACTCTCGGGCGCTGCTACGAGCAGTGTCACCCTTCACACCAGAAAGCTGGCGGGTACTATggggaaaaagcaaaacaagaagaaagtggaggaggtactagaagaagaggaagaggaatatgTGGTGGAAAAAGTTCTTGATCGGCGAGTTGTCAAGGGCAAGGTGGAATATCTTCTAAAGTGGAAGGGTTTCTCAGATGAGGACAAcacttgggagccagaagagaatctgGATTGCCCTGACCTTATTGCTGAGTTTCTACAGTCACAGAAAACAGCTCATGAGACAGATAAGTCAGAGGGAGGCAAGCGCAAAGCTGATTCTGATTCTGAAGATAAAGGAGAGGAAAGCaaaccaaagaagaagaaagaagagTCAGAAAAGCCACGAGGCTTTGCCCGGGGTTTGGAGCCAGAGCGGATTATTGGAGCTACTGACTCCAGTGGAGAGCTCATGTTCCTGATGAAATGGAAAAACTCTGATGAGGCTGACCTGGTCCCTGCCAAGGAAGCCAATGTCAAGTGCCCACAGGTTGTCATATCCTTCTATGAGGAAAGGCTAACGTGGCATTCCTACCCCTCAGAGGATGATGACAAAAAAGACGACAAGAATTAGCCCTGTTGAGTACCAGCCCCTGTCACCTCTGACTcttTGAACCCTGAAACTGCTTGTGGCAGGTTCAGTTACTGACAGCACAAATTCCATTGAGTCAATTCAAGGATTGAATGACTTCACAAGCCCTGGTCTCAGGAGATTAACTTTCATATTGGGGTAGTGGTTCACTTGAGAATACAAAATCTTCAGATTAACTGATGTCCAAAATACTGTCTTGAATCATGAGATCCATCAATTTTTAGTATTGTCTAGACCTACAAATAGAACTACATTGTAAAATCTTTTTCAGCATGTGTTAAGATGTATGTGAAAATTTCTGTTTAAGTTTAAAGTTCATACCATACTGTCAGTTTTTGTCTTAATAAAATTATAGATTTCTAA