Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps23
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S23
Also known as -
Coordinate chr2:19823234-19824804
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation; maintenance of translational fidelity; and stress granule assembly. Part of cytosolic small ribosomal subunit. Orthologous to human RPS23 (ribosomal protein S23). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps23

Retroname Coord Strand Genomic Region ENSG
Rps23P1 chr1:1824386-1824863 - Intergenic
N/A UCSC
Rps23P2 chr1:204896819-204897318 + Intergenic
N/A UCSC
Rps23P3 chr1:90130974-90131377 - Intragenic
N/A UCSC
Rps23P4 chr2:189820676-189821100 + Intergenic
N/A UCSC
Rps23P5 chr2:207576894-207577373 - Intergenic
N/A UCSC
Rps23P6 chr3:167959285-167959789 - Intragenic
N/A UCSC
Rps23P7 chr4:183309997-183310208 - Intragenic
N/A UCSC
Rps23P8 chr4:36253791-36254270 + Intergenic
N/A UCSC
Rps23P9 chr4:72207163-72207596 + Intergenic
N/A UCSC
Rps23P10 chr4:81266247-81266582 + Intergenic
N/A UCSC
Rps23P11 chr5:145743048-145743555 + Intergenic
N/A UCSC
Rps23P12 chr5:70188470-70188960 - Intergenic
N/A UCSC
Rps23P13 chr7:2936604-2937094 - Intragenic
N/A UCSC
Rps23P14 chr8:118377989-118378491 - Intergenic
N/A UCSC
Rps23P15 chr10:95702776-95703277 + Intergenic
N/A UCSC
Rps23P16 chr14:43694150-43694653 + Intergenic
N/A UCSC
Rps23P17 chr16:85463546-85464033 - Intergenic
N/A UCSC
Rps23P18 chr18:40706732-40707229 - Intragenic
N/A UCSC
Rps23P19 chr18:56965232-56965734 + Intergenic
N/A UCSC
Rps23P20 chrX:33754033-33754324 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_078617.3
TCTCTTCTCTCTTTCTCTCGGGCCCGTGGCGCCGGCAAGATGGGTAAGTGTCGTGGTCTCCGTACTGCCCGGAAGCTCCGCAGTCACCGACGGGACCAGAAGTGGCATGATAAACAGTACAAGAAAGCCCACTTGGGCACAGCCCTGAAGGCCAATCCGTTTGGGGGTGCCTCTCACGCAAAGGGAATTGTGCTGGAAAAAGTAGGGGTTGAAGCCAAACAGCCAAATTCTGCCATCCGGAAGTGTGTCAGGGTGCAGCTCATTAAGAACGGCAAGAAGATCACAGCGTTCGTGCCCAATGACGGTTGCTTGAACTTCATTGAGGAAAATGATGAAGTTCTGGTTGCTGGATTTGGTCGCAAAGGCCATGCCGTGGGTGATATTCCTGGAGTCCGCTTTAAGGTGGTTAAAGTAGCCAATGTGTCTCTTTTGGCTCTGTACAAAGGCAAGAAGGAAAGACCAAGATCATAAAATTTTGACAATGGAAACAGAATAATAAATTTTCATATC