Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cd2ap
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name CD2-associated protein
Also known as METS-1|Mets1
Coordinate chr17:43059857-43187593
Strand -
Gene summary This gene encodes a scaffolding molecule that regulates the actin cytoskeleton. The protein directly interacts with filamentous actin and a variety of cell membrane proteins through multiple actin binding sites, SH3 domains, and a proline-rich region containing binding sites for SH3 domains. The cytoplasmic protein localizes to membrane ruffles, lipid rafts, and the leading edges of cells. It is implicated in dynamic actin remodeling and membrane trafficking that occurs during receptor endocytosis and cytokinesis. The mouse genome contains at least two pseudogenes located on chromosomes 9 and 17. [provided by RefSeq, Jul 2008]

Retrocopy(s) from Cd2ap

Retroname Coord Strand Genomic Region ENSG
Cd2apP2 chr17:3359395-3364572 - Intergenic
ENSMUSG00000116838 UCSC
Cd2apP1 chr9:10734632-10737486 + Intragenic
ENSMUSG00000111209 UCSC

Expression

Transcript Sequences

>NM_009847.3
GAGGAGCGGCCAAGCGCGCCGCGGGCGGATGGAGTCGCTTCCCCGCCGCGCCTGAGCCGGTGCACAGAAGGGGCCGCGGGGCCGCGCTCTCCCCGCCAGAGCCGCAGCATGGTTGACTATATTGTGGAATATGACTATGATGCTGTACATGATGATGAGTTAACTATCCGAGTTGGGGAAATCATCAGAAATGTGAAAAAACTACAGGAAGAAGGATGGCTAGAAGGAGAACTAAATGGGAGACGAGGGATGTTCCCTGACAATTTTGTTAAGgAAATTAAGCGAGAGACAGAACCCAAGGATGACAATTTGCCCATCAAACGGGAAAGGCAAGGAAATGTAGCAAGTCTTGTACAGCGAATCAGCACTTATGGACTTCCAGCTGGAGGAATTCAGCCACATCCACAAACCAAAGCTATTAAGAAGAAGACAAAAAAGCGTCAGTGTAAAGTTCTTTTTGACTACTCTCCACAAAATGAGGACGAACTGGAATTGATCGTGGGGGATGTCATTGACGTCATTGAAGAGGTAGAAGAAGGCTGGTGGAGTGGAACCCTGAACAATAAGTTGGGACTGTTTCCCTCAAACTTTGTGAAAGAATTAGAGTCCACAGAGGATGGTGAAACTCACAACGCTCAGGAGGAATCAGAAGTTCCTTTGACTGGCCCTACCTCACCGTTGCCATCTCCGGGGAATGGGAGTGAACCTGCTCCCGGATCAGTTGCACAGCCAAAGAAAATCCGAGGAATTGGATTTGGAGACATCTTTAAAGAAGGCTCTGTGAAACTTCGGACAAGAACTTCCAGTAGTgaaacagaggagaaaaaaacagaaaagCCTTTAATCCTACAGCCTCTGGGATCTAGAACTCAGAATGTGGAGGTAACAAAACCAGACGTTGATGGCAAGATTAAAGCTAAGGAATATTGTAGAACATTATTTCCCTATACAGGAACCAATGAAGATGAACTTACATTTAGAGAAGGGGAGATTATCCATTTGATAAGTAAGGAGACTGGAGAAGCAGGCTGGTGGAAGGGTGAACTGAACGGTAAAGAAGGAGTGTTTCCAGATAACTTTGCTGTTCAGATAAGTGAACTAGATAAAGACTTTCCAaAACCAAAGAAACCACCTCCTCCTGCAAAAGGTCCAGCTCCAAAGCCTGACCTGTCAGCTGCAGAGAAGAAAGCTTTCCCTCTAAAGGCTGAAGAAAAAGaTGAAAAATCACTGTTAGAACAGAAACCTTCTAAACCAGCTGCTCCTCAAGTCCCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACTTACTGAGGTCGCCTGGAGCAGTGTACCCAAAGCGGCCAGAAAAGCCAGTCCCTCCGCCACCTCCAGCAGCCAAaattaatggagaagtttctataaTTTCTTCAAAGATTGATACTGAGCCAGTATCAAAACCAAAGCTAGATCCTGAACAATTGCCAGTTAGACCAAAATCAGTAGACCTTGATGCCTTTGTAGCCAGGAACTCAAAAGAAACAGATGATGTAAATTTTGATGACATAGCTTCCTCAGAGAACTTGTTACATCTCACTGCTAATAGACCCAAGATGCCTGGAAGACGATTGCCTGGCCGCTTCAACGGTGGACATTCTCCAACCCAAAGCCCAGAAAAAACCTTGAAGCTACCAAAAGAAGATGATAGTGGCAACCTAAAGCCTTTGGAGTTTAAAAAGGATGCAAGCTACTCTTCAAAGtcaTCTCTTTCAACACCTTCAAGTGCTTCTAAAGTAAATACAGCTGCTTTCCTAACTCCGTTAGAACTCAAAgctaaagcagaagcagatgatgGGAAAAGAAATTCCGTGGACGAACTTAGAGCCCAGATTATTGAATTGTTGTGTATTGTAGATGCACTGAAAAAGGATCATGGGAAAGAACTGGAAAAGCTACGCAAAGAATTAGAAGAAGAGAAGGCCATGCGAAGTAATCTAGAGGTGGAAATAGCAAAGCTGAAGAAAGCTGTTCTGTTGTCTTGAGGTGGTGTGGACCCAGTGTTCCTAATGATTCATGAACTTAACTGACTTGTTAAAGACAGCAGAAATGGTGGTGTGATGAAGAAATAAGAGGACATAAACTGTGACATCTACCGAAAAGTTGGGGGTGAcaggttttttttatatattttgttttgccaatatgaaaaaaaagaagaggcctTATTTCTTactgtgctgggattgcaaacatTTCTATTGTTTGCTTAAATACTACTGAATCtgtataaaaaggaaagaaagttcaTAATAGTTTTTTTATTGAaacttgtattatttttaaagagttcTATACTATAAATATCGTAATATCTTTACAAATAAGCTGTAAGATAAACTATTTGAGAAGGACGGGTTAGCTTTATAGTAGAGTCACTGCTTTCCTGTACTGCATAGGGCATGAACTTGTATACAtacactacaccacacacacacacacacacacacacacacacacacacacacagacactttccTTTTAGCTTCTTACCCAGGATTACACTGCTGTGCCTGTTTGTCTGCAGTGCTGTTTGTACATTGGGTGATAAAATAGGAGTTCCTAGTTACTAGGTTCCTCACCCATGCATATTTAATCATTAATGAAATAATAACAATCCAAATTCTAGAGTGTTCTATAATGCTCACTATAGGATTCATTAAAGGAAGCTATTTAAATTGTACTGGATTAATCTTGAGAAAATAGGAGCTTTGTTCTAAATTCATGTGGCCTAAGAAATCTAAAACTGTCATGCTAATTCTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATGCTCATTCTACAGTCTTAAATATTACTCATTTCATTATCTTGTATTCATTGTACCCTTCCTTTAATTTTCACTAATGATAATCTTAGGAAACAAACCTAAACCCAGATATTTTCAGAATTCCAGAATGAGGTTCTATATTGGAAAGCTATTGTGTAAACACTCAGGTTTTACAGGCATAATTTATCGAATAGAACAAACTAAGTCCTAGAGATATTTTGGACTGTTACTTAGGTAAAGTGAAAAAGAGTATTAGTAATTGACCATATTGAAGATCATTCCACAATGGATGTTGAGCCATTTATTTAGCATCACAATCAACAGTTGAACATCTTAGACTGGCTCAGCCACTATCAGGGCGGTATGGCTACAGACCAAGTGAACATAAAAATGTTGTATCTGTAGGGCGACATGTTTAAAAACACAaaggttaattttaaaaagtgaaatgtttttatttgttaaaaaaaagttAGGTTTTAAGCTTTACTTTAGAAAATGAATGTCAGATTGTAAATTATCATGCTtaaaaaaacaatacattttctttacattttaatcttaaaatagaaaaaaaattaaagtcagaTTTCTTGTGTTATTTCAAGTAAAATAGAGCTGAAGTAGAAAATAATAGAATGCCAGCACAAGGTTACACTTGATTAGATTCTGGGGAGAGCTAATTGTACATAGAGTGTACATTGTAGGTGTTTTGACACAGGAActtatatatcccaggctggactTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCggtttccctgcctctgcctcccaagtgctaggatgacaggcatGCCCAGTGTGCCTAGCCTTTTTAACCATTTCAACTCTGAGCTCATCTAATGAGAGGTTACTGATGACCAaacttctccattttatttttaagtgattaGTCAAATGAAGTATTTGCTTCTTATTAATGTAATGACAGTCCTCAGATGACAGTGGCCTTACCCTAAGTATCATCTCCTACTTCCCCCACATTTTAGAAATGATCTCCTGCATTCCCAAAGGGAGGTTTGTCTCCACCCACACTGCTGGGAGGGAAAGGTCTAATAACAGTAAAAAGTAACATACACAGTCAACAGTAGGGGAGTGACTATGCTTTCTGGACAAATAGGTAACCCATAGATACTAGTTAAAATGTAAGAAATTAGAAAAGCAGATAACTAACAGAAAAGTGAGTTTATGTGTTATaaacacaaataagaaaaacagaaGCACAGCCCCTTATTGTATACTAAGTTTTCCTTTGCAGTTTGGCTCCTTCCTGACCCACTGTGTCACAACCTGACAGGCGATCTCAGCCCCAGGAGCACATGTAGTTTAATGCTTGTATGCTATTTAAAGGTCCATTTGAGCCACGTGTAGTGATGACATGCCTGTAACTTGGAGATTTGGGGAGAGaaaccatgagtttgaggccagcctgtgctgtatAGGGGCCCTATATCCACAAGAAAGGAAACAGCGTTCCTTTGGTGGCGGTGGGTATTTTTAGTCCACACAATCAGAGTAGCCATGAGTCATCCCTACACACTTTTGCCATCTCAGTCAGAATAGAGAAGTCATACTGTCTGTTTTCTATATGTCTATTTTATGCCCTTTACAAAATagttcagaaaaaaaaccaaacaagcttGAACTTAATTAAAGGGaaaaataattcctttaaaaGAGTAATTTGCCAGTATTTGCCCTTGATATGGGAACTTTTACTATTTCTAAAGTTAAAGTCAGAAAAtgattaataacaacaacaactttaCTTAGAGGTAAATCCCTCTTCCCCCAATATTAGTATAAAAGACAGCATTGAATCTGTCATTGCCAAATTATTAGTGAATGTATAGTTCAGATTTGCTAGTCTTTGAAACACAGCACTCCTAAGTTTCTAACAGGATTCCAATGTTATTTTGGTGTGTTTGTGACCACTAAGCTTGCTTCTTACTATAAAGGTATTACCTCTATACAACTGTACAGGACTTCACAGAAAATCAGAAGATGCAGAGAGAGTGGGCCCGGTCTTAACAGAGGACTCCTTACACTCCTAACTGTGATCACAGACAAGAAATACCTTCCGAAGTGCTCTGTAGATTTTTTTGATGAATGTTTTATGCTTGCATTTAAACTTGAAATGTATGAGCAGAATGAGACAATCTTTACAATCAGAATTGAGAAGTGTTACAATTGAATGGCCTTGTgctgtagcaataaaatgaccaAGTGCAATGACTTTAATAAAATCATCTTTCAAACGTTGCTGCTATTAATATTTTTAGTTAACAAAATTCTGTCGTTTAGCCTACCTTGCCTTCTGTTTGTTAACTGTTATGTGATACAGTTGATGTTTTGACAATCTAACATTCCAAAGTCCACATATATATCTTAAAAGTCTTAGAAtagtatattcatttttttttacaggtgctgttaaaaaaggaaatgaaagcatGCTTttccctcaaaaagaaaaattaataataaaagagaacTGTGCTGCC