Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPL10
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein L10
Also known as L10MT|MRP-L10|MRP-L8|MRPL8|RPML8
Coordinate chr17:47823272-47831541
Strand -
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. Sequence analysis identified three transcript variants that encode two different isoforms. A pseudogene corresponding to this gene is found on chromosome 5q. [provided by RefSeq, Nov 2010]

Retrocopy(s) from MRPL10

Retroname Coord Strand Genomic Region ENSG
MRPL10P1 chr5:119680171-119682008 + Intergenic
ENSG00000234259 UCSC

Expression

Transcript Sequences

>NM_145255.4
ACTCGGCTTCCGTCCATTCTTCCGGTGGAGATGGCTGCGGCCGTGGCGGGGATGCTGCGAGGGGGTCTCCTGCCCCAGGCGGGCCGGCTGCCTACCCTCCAGACTGTCCGCTATGGCTCCAAGGCTGTTACCCGCCACCGTCGTGTGATGCACTTTCAGCGGCAGAAGCTGATGGCTGTGACTGAATATATCCCCCCGAAACCAGCCATCCACCCATCATGCCTGCCATCTCCTCCCAGCCCCCCACAGGAGGAGATAGGCCTCATCAGGCTTCTCCGCCGGGAGATAGCAGCAGTTTTCCAGGACAACCGAATGATAGCCGTCTGCCAGAATGTGGCTCTGAGTGCAGAGGACAAGCTTCTTATGCGACACCAGCTGCGGAAACACAAGATCCTGATGAAGGTCTTCCCCAACCAGGTCCTGAAGCCCTTCCTGGAGGATTCCAAGTACCAAAATCTGCTGCCCCTTTTTGTGGGGCACAACATGCTGCTGGTCAGTGAAGAGCCCAAGGTCAAGGAGATGGTACGGATCTTAAGGACTGTGCCATTCCTGCCGCTGCTAGGTGGCTGCATTGATGACACCATCCTCAGCAGGCAGGGCTTTATCAACTACTCCAAGCTCCCCAGCCTGCCCCTGGTGCAGGGGGAGCTTGTAGGAGGCCTCACCTGCCTCACAGCCCAGACCCACTCCCTGCTCCAGCACCAGCCCCTCCAGCTGACCACCCTGTTGGACCAGTACATCAGAGAGCAACGCGAGAAGGATTCTGTCATGTCGGCCAATGGGAAGCCAGATCCTGACACTGTTCCGGACTCGTAGCCAGCCTGTTTAGCCAGCCCTGCGCATAAATACACTCTGCGTTATTGGCTGTGCTCTCCTCAATGGGACATGTGGAAGAACTTGGGGTCGGGGAGTGTGTTTGTCACTTGGTTTTCACTAGTAATGATATTGTCAGGTATAGGGCCACTTGGAGATGCAGAGGATTCCATTTCAGATGTCAGTCACCGGCTTCGTCCTTAGTTTTCCCAACTTGGGACGTGATAGGAGCAAAGTCTCTCCATTCTCCAGGTCCAAGGCAGAGATCCTGAAAAGATAGGGCTATTGTCCCCTGCCTCCTTGGTCACTGCCTCTTGCTGCACGGGCTCCTGAGCCCACCCCCTTGGGGCACAACCTGCCACTGCCACAGTAGCTCAACCAAGCAGTTGTGCTGAGAATGGCACCTGGtgagagcctgctgtgtgccaggctttgtgctgagtgctgtacatgtattagttcctttactgctgaccacattgtacccatttcacagagaaggagcagagaaattaagtggcttgctcaaggtcatgcagttagtaagtggcagaacagggacttgaaccaagccctctgctctgaagaccgcgtcctGAATTTCTTCACTAGAGCTTCCTCATCAGGTTACCCAGAAGTGGGTCCCATCCACCATCCAGGTGTGCTTGGATGTTAGTTCTCCACCCTCGAGGTGTACGCTGTGAAAAGTTTGGGAGCACTGCTTTATAATAAAATGAAATATATTCTACTTCCTTTATTTTGTGGTTTACACGGTTGTCCTCCCTCTAAACTTACTCTCAGGGGCTTCTCTGTCATCTGACTTTCCTCACTCTTGCTTCCCTTCCTAGGAAAATCCTCTTCCCCTATACCTGTTCCCACAAATGGCATCCCGCGCATGCTTGCCCTATTAAAGGCAGCTGACAGCTGTACCCACTA