Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Chm
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name choroidermia (RAB escort protein 1)
Also known as Rep-1
Coordinate chrX:111950289-112095235
Strand -
Gene summary Predicted to enable small GTPase binding activity. Acts upstream of or within blood vessel development. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Predicted to be active in cytosol and nucleus. Is expressed in urethra. Used to study choroideremia. Human ortholog(s) of this gene implicated in choroideremia. Orthologous to human CHM (CHM Rab escort protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Chm

Retroname Coord Strand Genomic Region ENSG
ChmP1 chr13:17512182-17515794 + Intragenic
 ENSMUSG00000113219 UCSC

Expression

Transcript Sequences

>NM_018818.2
AGTCACATGACACGTTTCCTGTCAAGATGGCGGATAATCTCCCTTCGGACTTTGATGTGATCGTAATAGGGACGGGTCTGCCTGAATCCATCATTGCAGCTGCatgttcaaggagtggccagagggTTCTGCATGTTGATTCAAGAAGCTACTATGGAGGAAACTGGGCCAGTTTCAGCTTTTCAGGACTGTTGTCCTGGCTAAAGGAATACCAGgAAAATAGTGATGTTGTGACTGAAAATTCAATGTGGCAAGAACAGATACTTGAAAACGAAGAAGCTATTCTTCTTAGTAGCAAGGACAAAACAATTCAACATGTAGAAGTATTTTGTTATGCCAGTCAGGATTTGCACAAAGATGTTGAAGAAGCTGGTGCACTGCAGAAAAATCCTGCTTCAGTGATGTCCGCACAGGCCACAGAGGCCGCAGAGGCTGCAGAGGCCGCAGAggctgcagaggccacagaggctgCAGAGGCCGCTTGCCTTCCTACTGCAGAGGAGTCCTTAAGCACGAGGAGCTGTGAACTACCTGCAGAACAAAGTCAGTGCACGGGGCCAGAGAGTTCACCACAAGTAAATGATGCTgaagtaggagagaaagaaactcAGAGTGATGCAAAAAGTTCAACAGAACAATCAAGTGAAATTTTGCCTAAAGTACAAGACAACACAGAGACACCAAAGAGAAATGTAATTACTTACTCACAGATTATTAAAGAAGGCCGAAGATTTAACATTGATTTAGTATCAAAACTTCTCTATTCTCGGGGATTACTAATTGATCTTCTAATCAAATCAAATGTTAGTCGGTATGCAGAGTTTAAAAACATTACGAGGATTCTTGCATTTCGAGAAGGAACTGTGGAACAGGTCCCCTGTTCCAGAGCAGATGTCTTCAATAGCAAACAACTTACTATGGTAGAAAAGCGAATGCTTATGAAATTTCTTACATTTTGTGTGGAATATGAAGACCATCCCGATGAGTACAAAGcATACGAGGAAACTACATTTTCTGAATACTTAAAAACTCAAAAATTAACCCCCAACCTACAATATTTTGTCCTGCACTCAATTGCAATGACATCAGAGACAACAAGCAGTACTGTAGATGGTCTCAAAGCTACTAAAAAGTTTCTTCAGTGTCTTGGGCGGTATGGCAACActccatttctgtttcctttataTGGCCAAGGAGAACTTCCACAGTGTTTTTGCAGaATGTGTGCTGTGTTTGGTGGAATCTATTGTCTTCGCCATTCAGTACAGTGCCTTGTAGTGGACAAAGAATCCAGAAAATGTAAAGCAATTGTAGATCAGTTTGGTCAAAGGATAATCTCTAAACATTTCGTTATTGAAGACAGTTACCTTTCTGAGAATACATGTTCCGGTGTACAGTACAGGCAAATTTCCAGGGCAGTCCTGATTACAGATGGATCAGTACTAAAACCCGATTCTGATCAACAGGTCTCCATTTTGACAGTGCCAGCAGAAGAGTCAGGAAGTTTTGCTGTTCGAGTCATTGAGTTATGCTCTTCAACAATGACATGCATGAAAGGCACATACTTGGTACATTTGACTTGCATGTCTTCTAAAACAGCAAGAGAAGATTTAGAACGAGTAGTCCAGAAATTGTTTACTCCATATACAGAAATCGAAGCAGAAAATGAACAGGTTGAAAAGCCAAGAATTCTATGGGCACTCTACTTCAATATGAGAGACTCTTCGGATATCAGCAGAGATTGTTATAATGATTTACCGTCCAATGTCTATGTGTGCTCTGGCCCTGACTGTAATCTAGGAAATGATAATGCAGTCCAACAGGCGGAAACAGTTTTCCAGAAAATCTGCCCAAATGAAGACTTCTGTCCAGCCCCACCAAATCCTGAAGATATTATTCTTGATGGAGACAGCTCACAACAAGAAGTTTCAGAATCCAGTGTCATACCAGAAACCAACTCAGAAACTCCCAAGGAAAGTACAGTCCTAGGAGACTCAGAAGAGCCCTCTGAATAGTGGATGTGCATCAGACATAACATTCTATTTGGAAATTCCTGTCGCCTTCACAGTCTTCTTGATAGAAGGAATATTTgaaatctttcaaaaagcaacAACCAATTTATTAGGAAAAATTAGGAGAAACAGGTTCCAGAAATCCAAAAAGGAATTTTTTCAACAAGGGCATTTCCAGAAACATAAAACACTTATAAAGCACATTAACTTACCTGTTTTAACATACCAAACCTGTGAGATTAGCAGGTGAAAAATATGAAAGGACTGATTCCCAGAAATGTAGTTATGATGGGAAAGGGGTCCTATGCTTCGTTAACAATTATGTGGTGTTCACAGAAATTTGTTCGCCAATTgtgatctttttgttgttgttgttgttgaaagccACATCTGGAGAGTCAGCTCACATACTTATTTTGGttatttgaattatattttcaatCTGAGCATGATATAACAGATAAAAGCATGTGTAAATACGGTAGAATAAAGCTAAACTATCATGAACTGGCCAGGAGCCTATATTTGGAGTAAAAGTTGGTTTTATTTCCTATGTTAAAAGCTGAATATGTTAATACTAAGGTGTTTAGACATTTTGCTAATTTTAATTTCTTAGTAATTAGTGATTTGTATATAAATCACATACACAATTGGCCAAACTTCAAAGATTAAGAAATAGAAGAATACAAGCAAACATTTGATAGGATGATTCTACTGAGTCAACGGAAGCACTAAGTCCTTATCCACAGAACTAATTTCATCATAGCTGTGTTACTCAAAATATTAGGCAAATTGTTAAACTTATCTTCAGTTTCTCCAGATATGAAGTGAAACATGCCTCCTATAACAGAGCAGTCTTGAAGATCAATGCAGCACTAACATTAGAATGGTTCTTCTGGACATTGATCTGTGGAAAAATATCAAACCAACCTCATGATCACAGTGTTATATTTATTGCAGTAAATTTTTAATGCCAGTCTGTTTCCTAAACTCATTAATAACAGGTGGAATGGTAGTTCTTGAAGTCTTAGGAATACTTTATAAATTAACGTTCCTCTTCTGGCAACAAAACCATCAAGACCTGAACAGAGTGTAGCAATTAATAACCTGTAATATACATTTTACATGAGAAAAATGAGGGCTATCCATTGACAGAAAACCTATTTGCAATGCCTACATTTAAATGTCTCTAAGCTCTGATGGTCTACTTTCTTGAGCAATAGTTTAGACCTAGAActgcctataaataaataaacaataaataaacgcAATGCTTCCTGTcagggagccatggctccaagGAAAAGCACAGAATTCTCCATGTGCAGCTGCTTCCCTAACCTGGCCAGGTTTCAGCGATGTTAAAGCTCCCAGCACAGATTCATAAGAAATGTAAAAATCCAAGGAATGTAGCTCTTGCTGACCCTTGAAGAAGGAGTTGGATTGAGAAAATGGGAAAAATTTCCCAGACTTCCAGGCTGTTCCTCTCAGGTTGCCTGTACCTCCCGCTGTACAGCTCTCTCCTCTGGGGTATCCAATCCTTTTTATAATGTCACACAAATCAGGGACAGAATCACTTTATAACCTACTTTGTCACAAAGCTTCAGCTCTTATGTCAGCTGTTGTTTCCTGAAGCCCACCTAGGGCATGCACTAAATGCCAAGTACGCTCCTGTAATGCACCAGGTACTGGCCCTGCCTCTCCATACCAGCAATATGAAAGTTTCTCTTGGATGGGGACGTTAAGTTGGAATACAATCACAGTTATGTCACACCAGTAAAAGTGTTATACTTTGTTATAATCTTAGAGTTAAGGCCTCCTAAATGTAGAATGCACATTTATCTAAGGAGACTATTAAGCTAGATAGGGTTAGAATAATTAGAAGAACTAGACACCTTTGGACACTGCAGCTCTGTACATTGTAGAACAACACagaaactattttttatttcatggCCCAGCGTACACAATATCTTTTTTTCATCCTTTTGGtgcaatcagaaaaaaaaaaaaaaaaactctcttccAGGTCATTTACTGAGTATATTATTAAAATGCTTAAAGCTCCTGAATATGATTAATAATGACTGAAATACCacaaaattgttttcaaaattgTAGACAGACCTATTTCTTGTTGCCTCAGAGTGTCATACTAAACCTTTGAagagcattttcttttgttttcttaattattgCTTAATACTTGGTTTTACTGTATTAAGGTCAAAACAATACCAACAACAAACCTTAAGGTTGTATTATAAAACCTTACAACACAATGTTTGCTGTTTTACACAATGCAAACATTtcagtaattttaaattttgaagttGCTGGTatcaaaatttttttatttgtttgttgaaagTATTTAAATATGCATGCCTGTTTCTGGAAACGAAAAATGGTATATCATTAAGTGATAAGATCCAATAACTAATCCTATGTTGCTTTTGTATATTTTTCTAGTTGGTGTGCCTGTCTAAGAAAGCATATATAATAAATGtcagtttctatttttatataataaaatggcCATGGGTAACTTCTAGACTAGTGGACATTTCTAACataatatctataattataatgttaattaataattattaactTCTGGCAAGATTGTTTCTAGAATTATCTGCCCTAGTATTGTTATCTAGTTCCTAATAGTAGCAATCAtttaaaggaatttaaaaaaacattttcttgcAAATACTTATGTGCTACTGGTATTGAATAATTTGTCTTTTGCTCAGTAAAAGTTCTTACGTATTTAAAAAGGCATGAGTCTATAATAATTTGCATACTGTAACAGGGAATTTTcagagaaaataaagacttttcaaTGCTTT