Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Smc3
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name structural maintenance of chromosomes 3
Also known as Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD
Coordinate chr19:53588827-53634262
Strand +
Gene summary Enables chromatin binding activity and mediator complex binding activity. Acts upstream of or within meiotic cell cycle and stem cell population maintenance. Located in lateral element. Part of nuclear meiotic cohesin complex. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and respiratory system. Human ortholog(s) of this gene implicated in Cornelia de Lange syndrome 3. Orthologous to human SMC3 (structural maintenance of chromosomes 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Smc3

Retroname Coord Strand Genomic Region ENSG
Smc3P2 chr11:79796801-79797322 + Intergenic
ENSMUSG00000082252 UCSC
Smc3P3 chr17:23855567-23856021 + Intragenic
ENSMUSG00000117108 UCSC
Smc3P1 chr7:25491280-25492269 - Intergenic
ENSMUSG00000108767 UCSC

Expression

Transcript Sequences

>NM_007790.3
GCCATTTTGTTTGGCCACAGGGGGAGCGAGCGGGAGCGAGCGGAGCGCTGTGAGGAGGGGGCTGTCTTGCTCGTCTTCCGAGCCTGCGGCCGCGCTGCTGCGGTGCTGAGGCGACGCCTTCCCCCTGCCGAGGGGCGCGGAGCCATGTACATCAAGCAGGTGATCATCCAGGGCTTCCGAAGTTACCGAGACCAAACAATtgtagatcccttcagctccaaaCATAATGTCATCGtGGGCAGAAATGGCTCTGGAAAAAGCAACTTCTTTTATGCAATCCAGTTTGTTCTCAGTGATGAATTCAGCCATCTTCGTCCAGAGCAGCGATTGGCTTTGTTGCATGAGGGTACAGGTCCTCGTGTTATTTCTGCTTTTGTGGAAATCATTTTTGACAATTCGGACAACCGGTTACCAattgATAAAGAGGAAGTTTCACTTCGAAGAGTTATTGGTGCCAAAAAGGATCAGTATTTCCTAGATAAGAAGATGGTCACGAAAAATGATGTGATGAATCTCCTTGAAAGTGCTGGGTTTTCCAGAAGTAATCCTTATTACATTGTTAAACAAGGAAAGATCAACCAAATGGCAACGGCACCAGATTCTCAGAGATTAAAGCTGTTGAGAGAAGTAGCTGGTACTAGAGTGTATGATGAACggaaagaagaaagcatctcCCTGATGAAAGAAACAGagGGCAAACGGGAAAAGATCAATGAGTTGTTGAAGTACATTGAAGAGCGCCTGCACACtctagaggaggagaaggaggagctggCCCAGTATCAGAAGTGGGATAAGATGAGGCGCGCCCTGGAGTACACCATCTACAACCAGGAGCTCAACGAGACGCGCGCTAAGCTCGACGAGctttCTGCTAAGCGAGAAACGAGTGGAGAGAAATCCAGACAACTAAGGGATGCCCAGCAGGATGCAAGAGACAAAATGGAGGATATTGAGCGCCAGGTTagagaactgaaaacaaaaatttcagccatgaaagaagaaaaagaacagctTAGTGCTGAAAGACAAGAGCAGATTAAGCAAAGGACCAAGTTGGAGCTTAAAGCCAAGGATTTACAAGATGAGCTGGCGGGCAACAGTGAACAGCGGAAACGTTTATTAAAAGAGAGGCAGAAGCTGCttgaaaaaatagaagaaaagcagaaagaactGGCAGAAACAGAACCTAAATTCAACAgcgtaaaagaaaaagaagagcgaGGAATTGCGAGGTTGGCTCAAGCTACACAGGAAAGAACTGATCTTTATGCAAAGCAGGGTCGAGGAAGCCAGTTTACGTCAAAAGAAGAAAGGGATAAATGGATTAAAAAGGAACTGAAGTCTTTAGATCAGGCAATTAATGATAAGAAAAGACAGATTGCTGCTATTCACAAGGATTTGGAGGATACCGaggcaaataaagagaaaaatctggAGCAATataatAAATTGGATCAGGATCTCAATGAAGTCAAAGCTCGAGTTGAAGAACTGGACAGAAAATATTATGaagtaaaaaataagaaagatgaaCTACAAAGTGAAAGAAATTACTTGTGGAGAGAGGAGAATGCAGAACAACAAGCACTTGCTGCTAAAAGAGAAGACCTTGAGAAGAAGCAGCAACTTCTTAGAGCGGCAACAGGAAAGGCCATTTTAAATGGAATAGATAGCATTAACAAAGTGCTAGAACATTTTCGGCGAAAAGGTATAAACCAGCATGTTCAAAATGGCTACCATGGCATCGTAATGAATAACTTTGAGTGTGAACCAGCTTTCTATACTTGTGTGGAAGTCACTGCTGGTAACAGGTTATTTTATCACATTGTTGATTCAGATGAAGTCAGCACGAAAATTTTAATGGAGTTCAATAAAATGAATCTTCCTGGAGAGGTGACTTTCCTGCCTCTTAACAAGTTAGATGTGAGAGATACTGCCTATCCTGAAACTAACGATGCTATTCCTATGATCAGTAAGCTGAGGTACAATCCCAGATTTGACAAAGCTTTCAAACATGTATTTGGAAAGACACTCATCTGTCGGAGCATGGAAGTTTCAACTCAGCTGGCCCGGGCCTTCACTATGGACTGTATTACTTTGGAAGGTGATCAAGTCAGCCATCGAGGTGCTCTGACTGGAGGTTATTACGACACAAGAAAGTCTCGACTTGAGTTACAGAAAGACGTtaggaaggcagaggaggagctGGGTGAGCTGGAGGCTAAGCTCAATGAAAACCTACGCAGGAACATTGAAAGGATTAATAATGAAATTGACCAGTTGATGAACCAAATGCAGCAGatagagacccaacaaagaaaatttaaagcatCCAGAGATAGCATATTATCAGAGATGAAGATGCTAAAAGAGAAGAGACAGCAATCAGAAAAGACCTTCATGCCAAAGCAACGTAGCTTACAAAGCTTGGAGGCAAGTCTGCATGCTATGGAGTCCACCAGAGAGTCACTGAAAGCGGAGCTAGGAACGGATTTGCTTTCTCAACTCAGTCTGGAAGATCAGAAAAGAGTCGACGCTCTGAATGATGAAATCCGTCAGCTGCAGCAGGAAAACAGACAGCTGCTAAATGAAAGAATTAAACTAGAAGGCATTATTACTCGAGTAGAGACTTACCTGAATGAGAATCTGAGGAAACGCTTGGACCAAGTAGAACAGGAACTTAATGaactgagagagacagaaggtGGTACTGTTCTTACTGCCACAACATCAGAACTTGAAGCTATTAATAAAAGAGTAAAAGATACTATGGCAAGATCAGAAGATTTGGACAATTCCATTGACAAAACAGAAGCTGGAATTAAAGAGCTCCAGAAAAGTATGGAGCGCTGGAAAAATATGGAGAAAGAACACATGGATGCCATAAATCATGATACTAAAGAGCTGGAGAAGATGACCAACCGGCAAGGCATGCtgttgaagaagaaggaggagtgtATGAAGAAGATCCGGGAGCTGGGGTCCCTCCCCCAGGAAGCGTTTGAGAAGTACCAGACACTGAGCCTGAAGCAGTTGTTTCGAAAACTGGAGCAATGCAACACAGAGTTAAAGAAGTACAGCCACGTGAACAAAAAGGCTCTAGATCAGTTTGTGAATTTCTCTGAGCAGAAGGAAAAGCTGATAAAGCGGCAAGAGGAATTGGATAGAGGCTACAAATCAATCATGGAATTGATGAATGTACTTGAACTTAGAAAATATGAAGCTATTCAGTTAACTTTCAAACAGgtatctaagaaCTTCAGTGAAGTTTTCCAGAAGTTGGTACCTGGTGGCAAAGCGACTTTGGTGATGAAGAAAGGAGATGTGGAGGGCAGCCAGTCTCAGGACGAAGGAGAAGGGAGTGGCGAGAGTGAGCGGGGCTCTGGGTCACAGAGCAGTGTTCCATCAGTTGACCAGTTCACAGGAGTTGGGATCAGGgtGTCATTTACAGGGAAGCAAGGGGAGATGAGAGAAATGCAGCAGCTCTCAGGAGGACAGAAATCTCTGGTAGCCCTTGCTCTCATCTTTGCCATTCAGAAATGCGACCCTGCTCCTTTTTACCTGTTTGATGAGATCGACCAAGCTTTGGATGCTCAGCACAGAAAAGCCGTGTCAGATATGATTATGGAGCTAGCCGTGCATGCCCAGTTTATTACCACTACTTTCAGGCCTGAACTGCTTGAGTCAGCTGACAAATTCTATGGTGTAAAGTTCAGAAATAAGGTTAGTCACATTGATGTGATCACAGCAGAGATGGCCAAAGATTTTGTAGAAGACGATACCACGCATGGTTAACTGAAGGATAATGCTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACtgtaaattttaaaactaaatatttgGTTATTATTGAGTTTTTAGATTTAGAGTACACAGTCCTTTTATACTTGTCTTTGTATTTTATAAGCTCCCCTGTAATGTTACATTTCTACATATAGCTGAGGAATTTTATTTCCTATGCGGCTTTTTGTAAAGTGTCCTCCTATTTTAAATCTTTTGAGATATTCTAAATATTCTTCCCAATTATTTTATAGCTTCTATTAAATAATTGGTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAacattaaatacatattttgCATAAGAAAGTGTTGCTTTCAGTTACTAGAGGACTAAAAAGTACAGTTCTGTATTCTGTTAATTACTcactgggttttcaattctggcCATGGTTTATAATCTGTTTTGAATTTTCCAAAGTGTCACAGTGCTAAAGTCTTTCCTTGGGCTAGCCCAGGCAATCTTAAGGAAGTGCTGTCCCAACCACCTTGCTTAAAAGTTCCTCAGGTGGTGCAGAGTTTGAGGACTGCTAACAGCCCTGCTTTTACTCAGATGAGAGTCCTTTGAACATTCTTTTCTGTTTACATCATACACACAGGTATTGGATCTCATGGGTCTgattatagatgtttgtgagccgccacaggaccactggaagaacagccagtgctcctaactgctgagccatctccctagaccCCTTCCAACATTGTCAATTTAATATGACTCTCTTAACCAAAGCCATAGATTTAGAAAAGCAGTTTTATGTGGGATTCAGATGCTGATACCAAATGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAGTTCTAGGACCACAAAAAAAGTAAGGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTggggcattttgtttgtttttaaatggttttGCCATTCATGTGCCATAAAATTTAcccatg