Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cttn
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name cortactin
Also known as 1110020L01Rik|Ems1
Coordinate chr7:143989461-144024672
Strand -
Gene summary Predicted to enable several functions, including Arp2/3 complex binding activity; actin filament binding activity; and profilin binding activity. Involved in intracellular protein transport and regulation of autophagy of mitochondrion. Acts upstream of or within dendritic spine maintenance; negative regulation of extrinsic apoptotic signaling pathway; and substrate-dependent cell migration, cell extension. Located in several cellular components, including cytoskeleton; lamellipodium; and ruffle. Part of voltage-gated potassium channel complex. Is expressed in several structures, including 1-cell stage conceptus; central nervous system; genitourinary system; gut; and sensory organ. Orthologous to human CTTN (cortactin). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cttn

Retroname Coord Strand Genomic Region ENSG
CttnP2 chr13:51358079-51360140 - Intergenic
ENSMUSG00000113521 UCSC
CttnP1 chr6:68363324-68364750 - Intergenic
ENSMUSG00000105248 UCSC

Expression

Transcript Sequences

>NM_001252572.1
GGACAGGGCTTGACGGGTGTTTCTAAATCGGATCTCCGCAGCTGACTGGCGGCCGAGCTGCCTATGAGTCCTGGAACTGTGTATCCTGCTTTCTTGATCAGCTAACAGGAATACGGGGCGGGGACGGCCTGGAATAGGGCGGGATCTTGCGTGGCCCCGGATGCGGCCCCGCCTCCGCGGAACCGGAAGTGAGCGGGCACAGGGAGCGGCGGGGCGCGGCGGGAGCCTGGTGGACCCTGCTGGTGCGGTAATCATTGATCATCGCAGATGCCCTCATATTCCACTTTGGATTCCTTGGATTCGGACAGACTCTGAACTGCTTTTCCCAGCAAAAGAGAAAGATGTGGAAAGCCTCTGCAGGCCATGCTGTGTCCATCACGCAGGATGATGGAGGAGCTGATGACTGGGAGACTGATCCTGATTTTGTGAATGATGTGAGTGAAAAGGAGCAGAGATGGGGTGCTAAAACCGTGCAGGGATCGGGGCACCAGGAACACATCAACATTCACAAGCTTCGAGAGAATGTCTTCCAAGAACACCAGACGCTCAAGGAGAAGGAGCTGGAAACGGGACCCAAGGCTTCCCACGGCTATGGCGGGAAGTTCGGTGTGGAGCAGGATAGGATGGACAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGGCAAGTTCGGTGTCCAGATGGACAGGGTGGATCAGTCTGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGACTACTCTAGTGGCTTCGGTGGCAAATACGGTGTGCAAGCTGACCGTGTAGACAAGAGTGCCGTGGGCTTTGACTACCAGGGCAAGACGGAGAAGCATGAGTCTCAGAAAGATTACTCCAAAGGTTTTGGTGGCAAATATGGGATTGACAAGGACAAGGTGGATAAAAGTGCTGTGGGCTTTGAGTATCAAGGCAAGACAGAGAAGCACGAATCCCAGAAAGACTATGTAAAAGGCTTTGGAGGAAAGTTTggtgtgcagacagacagacaggacaagTGTGCCCTTGGCTGGGACCATCAGGAGAAGCTGCAGCTGCATGAATCCCAAAAAGACTATGCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGACAAGAATGCATCCACCTTTGAAGAAGTGGTCCAGGTGCCATCTGCCTATCAGAAGACTGTCCCCATTGAGGCCGTAACCAGCAAAACCAGTAATATCCGTGCTAACTTTGAAAACCtggcaaaggagagagagcaggaggacAGGCGGAAGGCAGAAGCCGAGAGAGCTCAGCGGATggccaaagaaagacaggagcaggaggaggcgcGCAGGAAGCTGGAAGAGcaagccagagccaagaagcagaCGCCCCCTGCATCCCCTAGTCCTCAACCAATTGAAGACAGACCACCCTCCAGCCCCATCTATGAGGATGCAGCTCCGTTCAAGGCCGAGCCGAGCTACCGAGGTAGCGAACCTGAGCCTGAGTACAGCATCGAGGCCGCAGGCATTCctgaggctggcagccagcaaggccTGACCTATACATCAGAGCCCGTGTACGAGACTACAGAGGCTCCTGGCCACTATCAAGCAGAGGATGACACCTACGATGGGTATGAGAGTGACCTGGGCATCACAGCCATCGCCCTGTATGACTACCAGGCTGCTGGCGATGATGAGATCTCCTTTGACCCTGATGACATCATCACCAACATAGAAATGATTGACGATGGCTGGTGGCGTGGGGTGTGCAAGGGCAGATACGGGCTCTTCCCAGCCAACTATGTGGAGCTGCGGCAGTAGGGCTGCCACCCAGAGCCTACCGGCACCAGCACAGGGTTCACACTACAGAGCATCTGCGTGTGTTTGAGTTGGTTTCTGCTTccgtttctgtttttgttctttttctgaagGTGGGGAGGGGAATATTCATATTGACTTTATATTTAATACATCTGCTGATGCTTCGGGGCATGTCCTGCCACAGGATTTGCTAATGTCTGATGATCATGTTCACAGAGAACATGGGTGATTACTTGCAGCCATCCCAGGTGTTTTAGTTTTGCCAAGCTGACTGTGGTATGTAGCCACTTCAGGGGTTGCGCTTCTCACTAGGTTGGCGGTACATGTGGCCTTgtgcccacccccatccccattgTAGTCAGGTTCCCAGGATGGAGACAGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGtttggaagaggaggaaaggggaccAAAGGGAAGTGAGGTCCTAGAGCGTTGACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAGCCAGGACCCCATGCTTCCTTTACTCTGTCTCCTCATCTCTGTACCTCCCCTGACACCCCAGTCCTGGTTGGCCCTTTCTCCTGCCTTGCCCTGAAGTCTTACCTTCTCCCATTGCATTCAAGGCCTATAGCACAAAGTGCATCTCAGAGATGTGCTAGTGGCTTATCCTGGGCTTGGCCTGCAACATGGGAGGCTTGGGACGGGGGTCTTGGACCTGCTCATGACCCCTGAGCAGCCTGCAATGAGGTGTGTGTGCCCAGCCActtggctgggcagggagatagATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCTTTTTGCCAAATATGTTCAGTTATAGTCAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCACCTGGGTGCCTCCATGGCTTCCTTGAGCAACTGTCCCTAAGATGCTTTCAAGTGTATGAGACATGAGGAGGCTGGGCCACTCTGGTTATGCACAGTCAGGCAAACTGTCCTTGTAGACGAGTCCCCGACTCTGGGATACATGAGGATCAATGCCCGTTTTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATAGGtatggaatttttttaaattaaatattcagAATAAACTTTTTTGATCCATTTACTGTGTG