Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ddx3x
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name DEAD box helicase 3, X-linked
Also known as D1Pas1-rs2|Ddx3|Fin14
Coordinate chrX:13147261-13160222
Strand +
Gene summary Enables primary miRNA binding activity. Involved in positive regulation of NLRP3 inflammasome complex assembly and stress granule assembly. Acts upstream of or within with a negative effect on primary miRNA processing. Located in cytoplasmic stress granule. Part of NLRP3 inflammasome complex. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability. Orthologous to human DDX3X (DEAD-box helicase 3 X-linked). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ddx3x

Retroname Coord Strand Genomic Region ENSG
Ddx3xP2 chr1:28028905-28031775 + Intergenic
 ENSMUSG00000101372 UCSC
Ddx3xP1 chr1:186700394-186702454 + Intergenic
 ENSMUSG00000039224 UCSC

Expression

Transcript Sequences

>NM_010028.3
AAAGCCGCAGTTCTCCCGTGAGAGGGCCTTTGCGGTAGAGGCAGCCTTTGCTCAGCAGCGGAAGACTCCGATTTCTCGGTACTCTTCAGGGATGAGTCATGTGGCAGTGGAAAATGCGCTCGGGCTGGACCAGCAGTTTGCTGGCCTAGACCTGAACTCTTCAGATAATCAGAGTGGAGGAAGTACAGCAAGCAaaGGGCGTTATATCCCACCTCATTTAAGGAACAGAGAAGCTACTAAAGgattCTATGACAAAGACAGTTCAGGGTGGAGTTCTAGTAAAGATAAGGATGCATACAGCAGTTTTGGATCACGGGGTGATTCAAGAGGGAAGTCTAGCTTCTTTGGAGATCGTGGAAGTGGATCAAGGGGAAGGTTTGATGATCGTGGACGGGGAGACTATGATGGCATTGGTGGCCGTGGAGATAGAAGTGGCTTTGGCAAATTTGAAAGAGGTGGAAATAGTCGCTGGTGTGACAAATCAGATGAAGATGACTGGTCAAAGCCACTCCCACCAAGTGAACGATTGGAACAGGAACTCTTTTCTGGAGGCAATACTGGGATTAACTTTGAGAAATATGATGACATTCCAGTCGAAGCAACAGGCAACAACTGTCCTCCACACATTGAAAGTTTCAGTGATGTCGAGATGGGAGAAATTATTATGGGAAACATTGAGCTTACTCGTTATACTCGCCCAACTCCAGTGCAGAAGCATGCTATTCCTATTATCAAAGAGAAAAGAGACTTGATGGCTTGTGCTCAAACAGGCTCTGGAAAAACTGCAGCATTTCTCTTGCCCATCTTGAGTCAGATCTATGCTGATGGTCCAGGAGAAGCTCTGAGGGCTATGAAGGAAAATGGAAGATATGGCCGTCGTAAACAGTATCCAATCTCTTTGGTACTGGCACCAACGAGAGAATTGGCAGTGCAGATCTATGAGGAAGCCAGAAAATTCTCATACCGATCTAGAGTCCGTCCTTGCGTGGTTTATGGTGGTGCTGAAATTGGCCAGCAGATTCGAGACTTAGAACGTGGATGCCACTTGTTAGTAGCCACTCCAGGACGTCTAGTGGAtatgatggagagagggaagatcGGGTTAGACTTCTGCAAATACCTGGTGTTAGATGAAGCTGACCGGATGTTAGATATGGGGTTTGAACCTCAGATACGAAGAATAGTTGAACAAGACACTATGCCTCCAAAAGGTGTCCGCCACACTATGATGTTTAGTGCTACTTTTCCTAAGGAAATACAGATGCTGGCCCGTGATTTCTTAGATGAGTACATATTTCTGGCTGTAGGAAGAGTTGGGTCTACTTCAGAGAACATCACACAAAAAGTGGTTTGGGTGGAGGAGATAGACAAAAGGTCATTTCTGCTTGACCTTCTAAATGCAACAGGCAAGGATTCCCTGACTCTAGTGTTTGTGGAGACCAAAAAGGGGGCAGATTCGCTGGAGGATTTCTTATACCATGAAGGATATGCTTGTACCAGTATCCATGGAGACCGTTCTcagagagatagggaagaggcCCTTCACCAGTTCCGCTCAGGAAAAAGCCCAATTCTAGTGGCTACAGCAGTAGCAGCAAGAGGACTGGATATTTCAAATGTGAAGCATGTTATTAATTTTGACCTGCCTAGTGATATCGAAGAATATGTGCATCGCATAGGCCGTACAGGCCGTGTGGGAAACCTTGGTCTTGCCACCTCATTCTTTAATGAAAGGAATATAAATATCACAAAGGATTTACTGGATCTTCTTGTTGAAGCAAAACAAGAAGTGCCTTCTTGGTTAGAGAACATGGCTTTTGAACACCACTACAAGGGTAGCAGTCGTGGACGTTCTAAGAGCAGTCGATTTAGTGGAGGGTTTGGTGCCAGAGACTACCGACAGAGTAGCGGTGCCAGCAGTTCCAGCTTCAGCAGCAGCCGTGCAAGCAGCAGTCGAAGTGGTGGAGGTGGCCATGGCGGCAGTCGAGGATTTGGTGGAGGTGGCTACGGAGGCTTTTACAACAGTGATGGATATGGAGGGAATTATAACTCCCAGGGGGTTGACTGGTGGGGTAACTGAGCCTGCTCTGTAGTAGGTCACCCTGCCAAACAAGCTAATATGGAAACCACATGTAACTTAGCCAGACTATACCTTGTGTAGCTTCAAGAACTCGCAGTACATTACCAGCTGTGATTCTccactgaaattttttttttaagggagctCAAGGTCACAAGTAAAGATGAAAGGAACAATCAGCAGCCCTGTCTGAAGGTGGTTTGAAGACTTCATTGCTGTAGTTTGGATTAACGCCCCTCCCGCCTACCCCTATCCCAAACTGCATTTATAATTTTGTGACTGAGGATCATTTGTTTGTTAATGTACTGTGCCTTTAACTTTAGACAACTTTTTATTTTGATGTCCTGTTGGCTCAGTAATGCTCAAGATTCCAATTGTTTTTGACAAAATAAATTTACTGAACTTGGGCTAAAATCAAACCTTGGCACACAGGTGTGATACAACTTAACAGGAATCATCGATTCATCCATAAATAATATAAGGAAAAACTCAAGTGGTAGCCTGTCTTAAGGCTTTTGATACTTGCAGattggggaaaaacaaacaacaaacgtCTTGAAGCATATTAATGGAATTAGTTTCTAATGTGGCAAACTGTATTAAGTTAAAAGTTCTGATTTGCTCACTCTATCCTGGATAGGTATTTAGAACCTGATAATAGTCTTTAAACAAGCCATTCCAGTCATGATGAGGTGATGTAtggatacatgcatacattcaaaGCACTGTTCTCAAAGTTAATGCAAGTAAATACAGCAATTCCTCTTTCAATGTTTAGGCAGATCGTTAACTATGAGCTAGCCAAATGTGGGCATGTTATTACAGGGAAAGTTTAAAGGTCTGATAACTTGAAATAGGTTTAGGAGAATTCATCTACTTAGACTTTTTAAATGCCTGCCATAAAAAATTGAAATGGTAGAATGGCTGACCACAGCAATGACCAGCCCTCACCTAGGGCTCTGGATGATTTTTGGTCTAATAACGCATGCTAGTGTTGATGTTTTTTGGTCAAGATGGGAATGAACAGGAAGAATTATGCAGCAGGCTTTATTTTAAATGCCGATTCACATTACTCTGTTCAAGCTGCGTTGAGATGTTAAACTGGCTTACTATagactttgtaaaaaaaaaaaaaacaaaacaaatggctcCAGAAGAGTAACAAACTGAAATCTGAGATCACACAGGTTGGAAATATGTACATAACTGCACAAGGTGTCAATTCTGCTCTACAGTGCAGTTTAGTCAGTTTTAGTTGCATAGGTTTCCATTGTATTTATAGTCTGTTTATGCTAAATCTGGCCAAAGATGAGCATTGTCCACCACTAAAATGCCTATGCCACTGGGAATTCTGGGTTAATTTTGTGACCAGAATGCAGTGATCAAAATGTTCAATCTTTTTACAGTGGCATAGGAAGATGGCAAAAATTTCCTAAAGTGCAATAGATTTTCAAGTGTATTGTGCCTTGTTCTAAAACTTTTATTAAGTAGGTGCACTTGACAGTATTGAGGTCATTTGTTATGGTGCTATTTCAATTAGTCTAGGTTTAGGCCCTTGTACATTTTGCCCATAACTTTTTACAAAGTACTTCTTTTATTGCACATTCagagaattttatatatatgtctTGTGTGCGTGTCCTTAAACTTCCAATCTTATTTTGTCTCTTGGAGATTGTTGAACGCAGCTTGTCTAGGAAAGGGATGGGACTAGATTCTAAAATTTATTTGGGACCATGGGAATGATAGTTGGGAAGAAAACTTTGCACACGACAGATTTCTAGATACTTTTTGCTGCTAgttttatgtaatatttattgaacattttgacaaatatttatttttgtaagccTAAAAGTGATTCTTTGAAAGTTTAAAGAAACTTGACCAAAAGACAGTACAAAAACACTGGCACTTGAATGTTGAATGTCACCGTATGCGTGAAATTATATATTTCGGGGTAGTGTGAGCTTTTAATGTTAAGTCATAATAAACTCTTAAGTCAAATTAAGCAGACCCGGCATTGGCGGTGTAGCCATAACTTTCTGATGTTAGTAAAAACAAAATTGGCGACTTGAAACTAAATCATGCCAAGGTTTTGATACACTTGTCTTGAGATATTAACGAAACACTTCAAAACACTGATACAAAGTGTCCAGATTCTCAGATGTTTGTTGTGTGAGTTTTGtttagttgtatttttttttcagtgaatgtCTGGCACATTGCAATCCTCAAACATGTGGTTATCTTTGTTGTATTGGCATATTCAGTGACTTGTACATTCAGCAATAGCATTTGAGCAAGTTTTATCAGCAAGCAATATTTTCAGTTATGTTTCAAAATTAAGAATGGGTTTAAACTTGCTGAATGTAAAGATTGACCCTCAAGTCACTGTAGCTTTAGTAGTTGCTTATTGTATTAGTTTAGATGCTAGCACTGCATGTGCTGTGCATATTCtggttttattaaaataaaaagttgaacTGCA