Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Dnmt3a
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name DNA methyltransferase 3A
Also known as MmuIIIA
Coordinate chr12:3851559-3964443
Strand +
Gene summary This is one of two related genes encoding de novo DNA methyltransferases, which are responsible for the establishment of DNA methylation patterns in embryos. Loss of function of this gene causes developmental defects in multiple different organ systems. There is a pseudogene for this gene located on chromosome 3. Alternatively spliced transcript variants encoding multiple isoforms have been observed. [provided by RefSeq, Nov 2012]

Retrocopy(s) from Dnmt3a

Retroname Coord Strand Genomic Region ENSG
Dnmt3aP1 chr3:77469287-77471249 - Intergenic
ENSMUSG00000102489 UCSC

Expression

Transcript Sequences

>NM_153743.4
CCGCCCCCAACCCCAacgccccctgcccctccccccagacgGGCAGCTATTTACAGAGCTTCGGGCCGGGGCTCACACCTGAGCTGTACTGCAGAGGGGCTGCACCTGGCCTTATGGGCTGAGAAGAAAGCCAAGGTAATTGCAGTAATGAATGCTGTGGAAGAGAACCAGGCCTCTGGAGAGTCTCAGAAGGTGGAGGAGGCCAGCCCTCCTGCTGTGCAGCAGCCCACGGACCCTGCTTCTCCGACTGTGGCCACCACCCCTGAGCCAGTAGGAGGGGATGCTGGGGACAAGAATGCTACCAAAGCAGCCGACGATGAGCCTGAGTATGAGGATGGCCGGGGCTTTGGCATTGGAGAGCTGGTGTGGGGGAAACTTCGGGGCTTCTCCTGGTGGCCAGGCCGAATTGTGTCTTGGTGGATGACAGGCCGGAGCCGAGCAGCTGAAGGCACTCGCTGGGTCATGTGGTTCGGAGATGGCAAGTTCTCAGTGGTGTGTGTGGAGAAGCTCATGCCGCTGAGCTCCTTCTGCAGTGCATTCCACCAGGCCACCTACAACAAGCAGCCCATGTACCGCAAAGCCATCTACGAAGTCCTCCAGGTGGCCAGCAGCCGTGCCGGGAAGCTGTTTCCAGCTTGCCATGACAGTGATGAAAGTGACAGTGGCAAGGCTGTGGAAGTGCAGAACAAGCAGATGATTGAATGGGCCCTCGGTGGCTTCCAGCCCTCGGGTCCTAAGGGCCTGGAGCCACCAGAAGAAGAGAAGAATCCTTACAAGGAAGTTTACACCGACATGTGGGTGGAGCCTGAAGCAGCTGCTtacgccccacccccaccagccaAGAAACCCAGAAAGAGCACAACAGAGAAACCTAAGGTCAAGGAGATCATTGATGAGCGCACAAGGGAGCGGCTGGTGTATGAGGTGCGCCAGAAGTGCAGAAACATCGAGGACATTTGTATCTCATGTGGGAGCCTCAATGTCACCCTGGAGCACCCACTCTTCATTGGAGGCATGTGCCAGAACTGTAAGAACTGCTTCTTGGAGTGTGCTTACCAGTATGACGACGATGGGTACCAGTCCTATTGCACCATCTGCTGTGGGGGGCGTGAAGTGCTCATGTGTGGGAACAACAACTGCTGCAGGTGCTTTTGTGTCGAGTGTGTGGATCTCTTGGTGGGGCCAGGAGCTGCTCAGGCAGCCATTAAGGAAGACCCCTGGAACTGCTACATGTGCGGGCATAAGGGCACCTATGGGCTGCTGCGAAGACGGGAAGACTGGCCTTCTCGACTCCAGATGTTCTTTGCCAATAACCATGACCAGGAATTTGACCCCCCAAAGGTTTACCCACCTGTGCCAGCTGAGAAGAGGAAGCCCATCCGCGTGCTGTCTCTCTTTGATGGGATTGCTACAGGGCTCCTGGTGCTGAAGGACCTGGGCATCCAAGTGGACCGCTACATTGCCTCCGAGGTGTGTGAGGACTCCATCACGGTGGGCATGGTGCGGCACCAGGGAAAGATCATGTACGTCGGGGACGTCCGCAGCGTCACACAGAAGCATATCCAGGAGTGGGGCCCATTCGACCTGGTGATTGGAGGCAGTCCCTGCAATGACCTCTCCATTGTCAACCCTGCCCGCAAGGGACTTTATGAGGGTACTGGCCGCCTCTTCTTTGAGTTCTACCGCCTCCTGCATGATGCGCGGCCCAAGGAGGGAGATGATCGCCCCTTCTTCTGGCTCTTTGAGAATGTGGTGGCCATGGGCGTTAGTGACAAGAGGGACATCTCGCGATTTCTTGAGTCTAACCCCGTGATGATTGACGCCAAAGAAGTGTCTGCTGCACACAGGGCCCGTTACTTCTGGGGTAACCTTCCTGGCATGAACAGGCCTTTGGCATCCACTGTGAATGATAAGCTGGAGCTGCAAGAGTGTCTGGAGCACGGCAGAATAGCCAAGTTCAGCAAAGTGAGGACCATTACCACCAGGTCAAACTCTATAAAGCAGGGCAAAGACCAGCATTTCCCCGTCTTCATGAACGAGAAGGAGGACATCCTGTGGTGCACTGAAATGGAAAGGGTGTTTGGCTTCCCCGTCCACTACACAGACGTCTCCAACATGAGCCGCTTGGCGAGGCAGAGACTGCTGGGCCGATCGTGGAGCGTGCCGGTCATCCGCCACCTCTTCGCTCCGCTGAAGGAATATTTTGCTTGTGTGTAAGGGACATGGGGGCAAACTGAAGTAGTGATGAtaaaaaagttaaacaaacaaacaaacaaaaaacaaaacaaaacaataaaacaccaAGAACGAGAGGACGGAGAAAAGTTCAGCAcccagaagagaaaaaggaatttAAAGCAAACCACAGAGGAGGAAAACGCCGGAGGGCTTGGCCTTGCAAAAGGGTTGGACATCATCTCCTGAGTTTTCAATGTTAACCTTCAGTCCTATCTAAAAAGCAAAATaggcccctccccttcttcccctccggTCCTAGGAGGCGAACTTTTTGTTTTCTACTCTTTTTCAGaggggttttctgtttgtttgggtttttgtttcttgCTGTGACTGAAACAAGAGAGTTATTGCAGCAAAATCAGTAACAACAAAAAGTAGAAATgccttggagaggaaagggagagagggaaaattctataaaaacttaaaatattggtttttttttttttccttttctatataTCTCTTTGGTTGTCTCTAGCCTGATCAGATAGGAGCACAAACAGGAAGAGAATAGAGACCCTCGGAGGCAGAgtctcctctcccaccccccgAGCAGTCTCAACAGCACCATTCCTGGTCATGCAAAACAGAACCCAACTAGCAGCAGGGCGCTGAGAGAACACCACACCAGACACTTTTCTACAGTATTTCAGGTGCCTACCACACAGGAAACCTTGAAGAAAACCAGTTTCTAGAAGCCGCTGTTACCTCTTGTttacagtttatatatatatgatagatatgagatatatatatataaaaggtaCTGTTAACTACTGTACATCCCGACTTCATAATGGTGCTTTCAAAACAGCGAGATGAGCAAAGACATCAGCTTCCGCCTGGCCCTCTGTGCAAAGGGTTTCAGCCcaggatggggagaggggagcagCTGGAGGGGGTTTTAACAAACTGAAGGATGACCCAtatcaccccccacccctgccccatgcCTAGCTTCACCTGCCAAAAAGGGGCTCAGCTGAGGTGGTCGGACCCTGGGGAAGCTGAGTGTGGAATTTATCCAGACTCGCGTGCAATAACCTTAGAATATGAATCTAAAATGACTGCCTCAGAAAAATGGCTTGAGAAAACATTGTCCCTGATTTTGAATTCGTCAGCCACGTTGAAGGCCCCTTGTGGGATCAGAAATATTCCAGAGTGAGGGAAAGTGACCCGCCATTAACCCCACCTGGAGCaaataaaaaaacatacaaaatgtaCTGGTGCTTTCTGTCTAAGTTGCcttttgtgtgttcttttataaGGCCCCACCATCCCCTCTGCACATGGCAGCTCCGGTCCTGGAATGTGATGTTTTTGGTCATCTCTAAAGACTGCAGTTTCATACTTGGGAGGCTGATGACACCTTTATTATAATTATTCTTATGGTTCTGGCTATAAttgttttaagattttctttcagaaaacaaaaacccaacacccTTCCCTTTAGGTTTCAAACCAAGGTGCGGGGGGGTGGCAGGTGCTTTTTTAAGGACCAGTGGCTCTGGTGCCCTGGCTCCCACCCCTCAGGCCAGGTGAGCCACTGGGCAACAAGCTAGGCAGCCAGGGAGTTTGAGGCCCACCCTCCGGGCCAGtcactcttctcttcttcttcccttcctcgtGAGTCCGGTGTGTCAGGGCTGGAGGGAGGCCGGGGCAGCCTCCCTCCTTGTGTGTGTGGTTGGAGTGGCGTGTGTTTCTTTTCTAGTGTTTGCTCTGATGGCTGTGCTCTCACTTGAGTCAGCTTCACCTGGGCCATGTGCTCGCACTTTGTTCCGCTCCCCAGCCAGGGCAGGCAGCCTGGCATTGGCAGCGGGAAGGGAAGGTGTGCTTGGCCCCAGGGTGAGGGCTTGCCTGGATGGATGGAGTGTAGATATGTGGCATATagagatatatattttataatgggAGGGGGGACGGCACCTCCTGGGACCAGCAGAGACTGggaggtgtgctgtcaagcaCATGGTCCCAAGACCGCATCCCTAGAAAGATGGGGCCTATGATAGGCCctatataaatacatagatagggTCATGTATAAGAAATATACACAGAGGGGGTTGGAGGGAGTGGGCTCTGTGTTGAGCCTGGGTCCTTCCCGCAGACAGCCCCACAAACAGTATATCAGTCTAACACATGCACAGGAATCTATTTCTGTCTGGATGCACACCAGGGAGCCCCCAGCACACTTCTCTGCAGGATCAGGACGATGGAGTCGGCTACACAGCTCTCTCTCGTACATCTGTTGCCCTGATGACAGGTAGACTCGATCCCAGAAGTTGCTAGGTGCTGAAGTCAGGAAAAGGAGGAGGTTTGATCCAAGCAGGTGCTTCCTCTAGCAGGTCTGTGTTGTATTCCCTTTGCCTCTGGTGATGTCAGCTTCTGTTAGCAGCCTGTGGTTACTGACCTGCAACTCTCGGCACCAGTCAAGTCAGCCCTCAGCCCCTACCTATTCTCCCCAACCAAAGTCGAACTGAAATCTCTCTTGGCCATGGGGCTTCCATtgggaaaataaaatgttaaaaaaaaaattaaaatgggacAGTGAACCTCACTTTTGGAGTAAAGCAAATCAGTAATTAGTGCTAAAACTAGTCAGAGGCTTTGGCCCCTTGCTCACTGCTCGGGACTAAGCTTGGCTGGTGGCTTGGTACACTGCTTGGGCTGTGTAGTCCTGCCCACCTCTGCTCATTTTCTCTGGATAGAGTTTTAAGATCGCAGCTAGTTTCCCCTGCCATGGCAGGTATGACTATGGGGCTGGAGCATCCAGGAGAGGGGGATGCTTGCCCTCTTGGAGTCCCTGTACTAAATGTAACGTCCTCCCTTGCTCCAGCAGGGCTCCATTCTGACCTGGAGTCCACCAGCACCATGCAGGAGGACTGGAGGGGAGGAAGGCTGCTTTAGGCAGTCCAAGGTGCTCCCTCCCCCTCTAGCAATGGCAAGGTCTTCCCAGCTCCTGTCAGGACTGTCTTCAAAGGCCATCTCTGCCCACCGCATATGTGACGAAGCTAGCCTTTCCCAGGAGCCTAGTGCCGCCTCAGCTGGGCCTGGTGCTCCCGTGCCTGGGGTTAGTGTGAGGGCTCAGGAGGAGGAGTTCCCAAGGGACTGAGTAGAGGCTTCCAGGTGGCTGACCAGTACTGACCTGACACGGTCCCTGATGGACTCCTCATGGGGCGGGCATCGGGTGGCCTTCTCTAGCTTTCCTTCCAGCCCCATCTGTAGGCTTAGTCTTACCATAGTGTGAGGGCACCAGGCGAGTTAGCCCCCaatatcttttggggaggggtgtCTTTGGGACTGTGCCAATCTGGCTATTCATCCGTCTCTACCCCAAGTGCGGCTTCTAGGGTCACCTCTGAGGAGAGCTGCTGGGATGCTGGGGTAGCTGAGGGGAGGTTGTGGGGAGTTTGCAGTGCATCTAGGAACTAGCTCACTGCAGGTGGGGCTGAAGCTGGATTCAGTCATGGGAGGTTCCCTGTGGGCTTTCCTTTCCAAAGACTAGGCTTGTTTTCCCTAGAAACTAAGGTGCTGGGGACTGGGTGACAGCCACCTCTCAGCAGGTGCCGTGTAAGTGTGAAGATTTGTGAAGATCTGTGGCCCTTGCCCAGGGGAGGTAGCTGGTGCTAGCACCAGGGTCACAGAACTAAGGCCTCCTGAGGAGGCACACATACCAGCGGGGTCCCAAGCTGGTGCTAATTCCTCTCATAGGACCCAGTAAGCCCGGGAGCCTGCAGTCGGCTGTTTCTCTGCTGTGGAATACCCTGTTAGAAAGCTGAGGTCCCCTAAAGAGCCTCCTGGACCGAGTCACTTTTGTGGCCGGGCTGAGTATGGCAGCAGGTAGAAAGATCCGCAGGCATAAAGATCCCTGTGGCTTTTGGCAAATGACTGAAGTGTGGATGCAGGAGCAATGAGTGGAGGCCAACATCAACAGCATCTACCCTCCCCAATAGTGTCTCTGTTCTGGGGGTGCTGTGGTCCTCACTTGCTGGCTTAGGATTGGAGTTAGGCTGAGCCACTTTGAAGGAGTGTGTTTACAGGAAGATACAAATTGTTGGTTTCTCTATTCTTTACTGTACAGTGTGTCCAGAGAGTAGAAGAAAATTCCTGGGCCTGTCTGGTTGGTGCAGAGCTTTTATGGCACTACAAGGTCTTCAGGAACTGTCACTGTAAGAGCCCTGGCTGTGAGCTGGGGCTACGTGACCACTGCAGCTGAGTTTCCAAGCAGGCCTGTGTTTGGATCTGAGTTTGACGCTTGGCGGCTCCCAGGGCTTGGGATGAGTGGCAGTGCTGACTTGTTCACTTGGCAGAGCCACCCTGTGAGGAGGTGGACTTAGTGGCCCTTTCCAATTGATCCTGTCCCATCCAGGCAGTATCAGCACTAGGAGCAGTGCTGGGTCAGAAGTCCGAAGGAAAGGACTCGGTTGATCGGGGTCATTGTGagcttgtgtatgtttgtgtagagaaagctGAACTTTGGGAGGAAAGGCCTTGTCCTTGCAGGCTTCCAAGACACCGCTAAGGTTAGCCTTTGGTTGGAGACAAGTCTCTAGCCCAGACACTGGAGTAGGCGCTGAGACCAAGAGGCAGGCCAAGATGGAGATCTATGGAAGGCCCTTTGCTGGTAGGGATTCAAAGCTTCTCCAGGGGACCCCAGAACTCTATTAACTGGCTCCCCTACCGGGACAAGCTTCGTTTGTGGGCTCATAGAGTGGCCATAGAGTGGGTTTAACCCAGCACCAAGCCTGAGGGCATGAGCAGTGGTCTAAAGTCTCACATAGTCCCATTTTACAGACTAATTTGATTGCCCGGCCGTAGAATTCTACAGAAACAACAATCACTGAAATTCCTTAGAATACGCAGAGGGAGGAGGTGACTCAACACGGTGCTaaacacattttattaaaaatatatattgttaaaTTAAGTCTGCTGTCTGGACAAtgatgttctgttttgttttcttgtagtgGAGTTTAAAAGAGACTATTATTTTACTCtgatatattattattaaaaaggcATTTTAACTTTGTACTTGAAAACTAAGTGAGCGATTTCACGTGTTTTAGCTGAGACATCGAAGTAGCGGGTGCTTACTTGTGGGAAATCATGTATTCATACTACAACATAAACTCCGTAGCTGATTTGGTAATAACTTTTACTGTTACAGACGAATTCGCTTTGACCCCGGTGGCAGAGCGCTTTGACTCCACATTCCACGCAGCTAAGTGCAGGACCTTCCAGAACCTTCCCCGGTCCCCCCTGGTCCTCTTTCGGTTCCTCTTCCTAGCTCTCTCttttcctaattcttttttttaagaattgtCGTTTGTTTTTCCTGGTCCCGGCTTCCTTCTACCACTGTATTTTTTGTTAGGGTTGCTTCTCTATTTATTGACAGTAATAATGTACATTTCACAGTCtggttctgggacagccaggaggGGTGTGGGGGGCTGCATACAGCTTGCTGCACTCTCCGGTGTCCTGTTGTATCTCTGTGTACGTGATGCTTGTGACATAGCTGTtgaagaaatattaaaaggtCAATGCGTACAGCAGGTGTAGAGAGTCCGTCAGTTCCGcttcatcactttttttttttttttttgtgcccagAAGAATATAATAAAGCTCCTTTCTAATGTACTTGTGCTGGAGAACACTTGAATAAATGGACTGTTTTTGTGCAAAAagaaaaacggaaaaaaaaaaaaaagcaccgtCATAATGTCCTTTTGTCCTGCGACTCCTTTCCCCTGATGTGGCCACTCACAGTCCTCCAGTGGGCTGAAGTGGGTGCAGTTTACGTTGGGAGGGTCTGGGAAATGGATTTCTAAAGTATCTCTCATATGGGTGTTAACTAGGGGTTGGGACCCAAGGGCAGAGGGAGTTTGGTTCAAGATCAAAAACAGGTTAGACTAAGGTGAAGTTGTCTCGTTTACTTCCCAAACCAGCAGATTCTCGAGACCAGAGCAGGCAACAGACTGGCATCCTGGTTAGCTGGCAGTAGGACCAGCAGGGACTTATGGATGCCAGAGTCCAGAAGGAAGAAGTCAGCAAAGGAGAGAGGCAGCTGGGGCTGGGGGAATCCTGGAAGAACCTTGCGTTTAAAGGAGATATTTGCAAACACTTGACAGGTGACCCAAGGGCTGGGATCAGTGGCCAATAGGGCTACTGCTGGTCTGAGCATAGGCTGCCTGGCAGGGCCTTGCAGCCTGAGGAGTTGTCCACCGTGTCTCTGCCATACCTATCTAGAAGGGCCGTCTGTATGCGGGGTCTGTCTGTCCTGCATATCTCCGGGAGTAGCCAGCAGGCTTGGCTGGGGTTCCACTCCTAAGGACTGTCCACCCGTTTCTTCCAGCAAACTTTCTGGACGGTTGGATAGGGAGAGACCGTGTGGCGGTCCTTGAGCAGACTGGGAAAGTTTGGCTAAACAGGTTTTCTCATGGGcactttttcttgctttttctttgacaAGGTTGTAAATGTGTATTTGGCTTTTACTCTACtttttttcttgatgtttttCAATGTTGATGTGGAATCTTACTTTCAAATGGCTGCATGGCATTTTCTTGTTgaatgtttgtttatatatattttattttcgcTATAAATAGAGCTTCAATAAACATCTTTATGTTTTGGCTTCCc