Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Chchd2
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name coiled-coil-helix-coiled-coil-helix domain containing 2
Also known as Etohi6
Coordinate chr5:129910002-129916311
Strand -
Gene summary Predicted to enable DNA-binding transcription factor binding activity and sequence-specific DNA binding activity. Predicted to be involved in several processes, including cellular response to oxidative stress; positive regulation of mitochondrial ATP synthesis coupled electron transport; and regulation of cellular response to hypoxia. Located in mitochondrion. Is expressed in several structures, including diaphragm; gonad; head mesenchyme; heart ventricle; and vertebral axis musculature. Human ortholog(s) of this gene implicated in Parkinson's disease 22. Orthologous to human CHCHD2 (coiled-coil-helix-coiled-coil-helix domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Chchd2

Retroname Coord Strand Genomic Region ENSG
Chchd2P4 chr13:27083669-27084021 - Intergenic
ENSMUSG00000082236 UCSC
Chchd2P5 chr15:63632075-63632636 + Intergenic
ENSMUSG00000115682 UCSC
Chchd2P6 chr16:30074042-30074569 + Intergenic
ENSMUSG00000116938 UCSC
Chchd2P2 chr4:34485726-34486394 + Intergenic
ENSMUSG00000095588 UCSC
Chchd2P1 chr4:148152386-148152991 - Intergenic
ENSMUSG00000094320 UCSC
Chchd2P8 chrX:141316365-141316844 - Intergenic
ENSMUSG00000081750 UCSC
Chchd2P7 chrX:102806401-102807064 - Intragenic
ENSMUSG00000083019 UCSC
Chchd2P3 chr11:6600234-6600832 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_024166.6
AACTTCGTAACTTCCGGGCCTAGGACGCTGAGTCCAGGCTCTGCCCATTACTGATATCTCCTTTGTCCAATAACCTTTAGCGCCCGAGCTTTTCCTGATTTCTTATTGGTTGCCCGGTGAGGTACCGCCTccacccttcctctctccttggtAGAAATTGCTGGACGCTTCTGTACGTTTCGCAGTTTGTCTTCGCTGATCGGTGAGACTTCGAGCAGTTAGGATGCCGCGTGGAAGCCGAAGCCGCACTTCCCGGGTGACTCCTCCGGCCAGCCGGGCCCCTCAGATGAGGGCTGCTCCCCGAAGAGCACCTGCAGCTCAGCCTCCAGCAGCAGCTGCGCCATCTGCAGTTGGCTCACCTGCCGCTGCGCCCCGGCAGCCAGGCCTGATGGCCCAGATGGCTACCACCGCGGCCGGTGTGGCTGTGGGCTCTGCAGTGGGACACACCCTGGGTCACGCCATCACTGGGGGCTTCAGCGGAGGTGGCAGTGCTGAGCCCGCAAAGCCCGACATCACTTACCAGGAGCCTCAGGGAGCCCAGCTGCAGAACCAGCAGTCTTTTGGACCTTGCTCTCTAGAGATCAAGCAGTTTCTGGAGTGTGCTCAGAACCAGAGCGATGTCAAGCTCTGTGAGGGCTTCAACGAGGTGCTGCGGCAGTGCAGGATTGCAAATGgtttaaTGTAATCAAGAAATTCAAGCTGAAGAGATGTAACATTGGTTCTGTATAATTGATAGTACAAGTGTGGACCCTTATATTTCTAACAGTTCATTGCTTTGGAATGGCCGTGAAAGAGATCTAACTGTGGATGCTTACTGAGGCTTGTATGTAGTGTTGGTTACTGGGGAAGTGTTTGGCCTCCTTGGACTGTGTTGTGATtgtgagttaaaaaaaataaattggttATTCTG