Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pcyt1a
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name phosphate cytidylyltransferase 1A, choline
Also known as CCT-alpha|CTP
Coordinate chr11:71547865-71592037
Strand -
Gene summary Enables several functions, including calmodulin binding activity; choline-phosphate cytidylyltransferase activity; and phosphatidylcholine binding activity. Involved in CDP-choline pathway. Located in endoplasmic reticulum; nuclear envelope; and plasma membrane. Human ortholog(s) of this gene implicated in spondylometaphyseal dysplasia with cone-rod dystrophy. Orthologous to human PCYT1A (phosphate cytidylyltransferase 1A, choline). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pcyt1a

Retroname Coord Strand Genomic Region ENSG
Pcyt1aP2 chr2:191935962-191938836 + Intragenic
 N/A UCSC
Pcyt1aP1 chr2:190472683-190475003 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>XM_006248444.3
CCGGGGTAGCGGACGCTTGCGAGGACAAAGGCGGGCTGGGACGGTCAGGGGGCTGTGACTGAAGAGTGGGTCAGTGACAGCCAGGGAAGTGTGAAGCAGGAGGCTACTGTGACTGAGGTACAATGACAGCCAAGAGGACTGTGACCCAAGGGTGGGCGCTTGTGAGGGGTCTGCGACCCCCGGAGCAGTAAATGCGAGGGACTCTGACCTCGGAGAGCACGAGGCAGAGGCTGCGACGGGACCATGACCGATTAAAAGAAGATGGATGCACAGAGTTCAGCTAAAGTCAATTCAAGGAAGAGGAGGAAAGAGGTACCTGGCCCTAATGGAGCAACAGAGGAAGATGGAATTCCTTCCAAAGTGCAGCGCTGTGCAGTTGGTTTACGGCAGCCAGCTCCTTTTTCTGATGAAATTGAAGTTGACTTTAGTAAGCCCTATGTCAGGGTGACTATGGAAGAAGCCTGCAGGGGAACTCCTTGTGAGCGGCCTGTGAGAGTTTATGCGGATGGAATATTTGACTTATTTCACTCTGGTCACGCCCGGGCTCTGATGCAAGCAAAGAACCTTTTCCCTAATACATATCTCATCGTGGGAGTCTGCAGTGATGAGCTAACGCACAACTTCAAGGGCTTCACTGTGATGAACGAAAATGAACGTTACGACGCGGTGCAGCACTGCCGTTACGTAGACGAGGTGGTGAGGAACGCCCCCTGGACTCTGACGCCCGAGTTCCTGGCGGAGCACCGGATTGATTTCGTCGCCCATGACGATATCCCCTACTCTTCGGCAGGGAGCGACGATGTGTATAAGCACATCAAGGAAGCAGGCATGTTTGCTCCCACACAGAGGACAGAAGGCATCTCCACATCAGACATCATCACCCGCATTGTCCGTGACTATGATGTGTATGCAAGACGGAACCTGCAGAGAGGCTACACTGCCAAGGAGCTCAATGTCAGCTTTATCAACGAAAAGAAATACCACTTGCAAGAACGAGTTGATAAGGTAAAGAAGAAAGTGAAAGATGTGGAGGAAAAGTCAAAAGAATTTGTGCAGAAAGTGGAGGAGAAGAGCATCGACCTCATCCAGAAGTGGGAGGAGAAGTCCCGAGAGTTCATTGGAAGTTTCCTGGAAATGTTTGGTCCAGAAGGAGCGCTGAAGCACATGCTGAAAGAGGGAAAAGGTCGGATGCTGCAGGCCATCAGTCCCAAGCAGAGTCCCAGCAGCAGCCCTACTCATGAGCGCTCCCCCTCCCCCTCCTTTCGGTGGCCCTTCTCTGGCAAGACTTCCCCATCTTCCTCCCCAGCAAGTCTCTCTAGGTGCAAGGCTGTGACCTGTGACATCAGCGAGGATGAAGAGGACTAACTTTTCATCCCTGTTCCCTCTCTCTCCCCCTGCCCGTCACCTCCAGAAGCTCTGTCGAATTCCATTTTGTGATCCCAACACTAAACCTAAGGACATCTACAAAGAACAGACAAACGGGGCAAGAGGACCTGGGAACGGGGGAACCAAAACAGCCCATGCCCTGCCTGAGACATTCTCAGCCACACCACGGAGGCTGCCCACACCTTAGAAGCCTGCTCTGCATCCATCTTTCCTCCCCAGAACGTTGCTTTACTGTTTATTGCTCATGTAATCTTGACAGGGAGATTGTCATTTACATCATTTCTTTTAAAAAGTAGTCTTTCAAATATAGTAAGTACAACTAATTTTTTGCCCCTGAGGAGTGGGCAGAAGAAGGAGGCGTGGAGTGCCCAGAGGCCTTTCTTCCTGAACACTAGTGCTTGCCTTCTGCTCCGAAGCAAAGCGGCTTGCCAGGTCCTTCAAACAGGGAGCCATGCTGCTGGGTAATTTGGGGAGAGTATCGTAATTTTAATGTCCCTAAAAAAATCTCAAAGCCGTATTAGCTCCAGATTCCCTGAGTGTCCTGCCGGCCCATGTGTCAGCGTGGCTGTGGGGGGAAGAGCTGTGAGCCTGACTTTTCTTACTCCCAGAGGAGTTTCTTGTCGGACCCAATGGGGTCCATGAAGACACTGATGGGGATGGACCCAAACCACAGAGCATCAGATGCAGTTTTTCCACTGTGTTCATCTTCTCAGCAAATCCTGTTGCCCAGTTATTCGGGAGCTCTTGCCAATCTCTTTCCTGCATCCTTCCTGTGAAGGAAGGGACACAGGGCTACTGTGACTGGAGAGAGGAGTGGGAGAAAGTCAGTCCGGCTCAAGAGCAGTTGGGGTTGAGTTCTGCTGAGCTCACGTCCCTCCCTGCAGCTGCCCTCTCAGCACGTCCGGCTTATACAAAGGATACTTTGTAAATGTTTGCAGCTTGCACTTGACCCGTCCTGGATCCATGCTGCTTATTGCAGTAGTCAGCACTTAGACTTTCACAGAGCACACAGGCAAAAGCACCTGGAAACACTCTCCTCAACCTCTGACCATCTTAGAATGTCCTTGGGTCAAATGAGTACCACATGGAGTCTTTGCTCCGAGAGCTGCACCTAGCAGGGATTTCCTCCAGTCCACCTCCAGAAGCAACAGGCACGGGTTAAAACTGCTAGCACACAGAGGTCATGCCCTCTTGCCTGCCTGTGGCTGGTGGCCCCAAGAGGAAACAAGTTGACTTTGAAATCAGAGAGTACTGACTCTCGGCACTTACTGTTGGGCAGGAGCCGGTGTTTCCGGCCCCTGGCACCCCATATCACTACATGGCCCAGCAAGCTCATGGCCATCAGTTATCCTGTAGCTGGATGTAGGGTAAAGTTGTTTATGTCCAGGGCCTACTAGTTGTCACTCATAAATACCCCTCGTGGGGGTGGAGCTTTGTGTTTTCAGCAAAGAAAACATTTTCTTTTTCCTCGTACCTCCTCACTGGTCCGTGCTGGGACTGTGAGCATTGTTCAGTCCTCCCTAGACACACGCTAGTGGAATCTGTGCTACTGCCTAAGGGTCTGAGGCTAGCACCACACAGTGCCTGCAGAACAGGACTACCTAGGCTTCTAAACTATCTCCCAGGCAAAGCTGAGCAGAGGAGAGGGGCAAAGAGGCACCCCCTGGTGTCCCAGTGGCCTGTGGAAACGCCATTGCTAACTCCTCATGAAGCATTGCTTTCTCTCAGACCTGATCCAGATGGCCTTGGCCTGGGATCCTTTCTCTGAACCTGTTGAAATTAGTCTTTTCTCACATTATGTACTGCGGAATGGCTCATTTTAACTTTTCTACTTTAGTCTTCTCTTTGGGGATCCGTTTCTCTCTGCCTTATTCTCCCAGGTATACAGAGGTGGTGATGTCACTGCTGGCGCTCACCTGCTTGTTCTCTCAGTGCGTGTCACTCAGGTGTGGCCTGTGGAAATGCAAAGGGAGCCATTCATGTTCGACTTTCCTCCATGTAGTCACTCAAGTAGACAGTCCCAGACATCAGAGCGTCTATGCTGACTCCCTGCTAGGACTAGCCGATGCTCAATACTCACCCGTTACTGTCTCCTAACACTCAGACAGTTTAGACATAAGCAAAGGCATTGGGGGTGTGGCTGCATGTATGTATGTGAGGGTCAGTGTGCTCCTTGGTGCTAGAAAAAGGTACTGTTGAGATGGTGCACCATGTGGGTAAGCTGTGTAACGCTCGATCTGTGATTCAGTCTGTCTAAGAAAGCAGCATGGAAGGGCCGGGGGAACCGTAAGTTGTTTGGCCTCACAGCCTCTATACCATATGAGGAGGCTGAAGACAGGAGCCCTGTGCCTGGGGTTGAGGAGGAGCCAGTGCAGCAGTTAACCTTGGCACGGGCTGAACAGGAAGTTTGCTTATTCGTATACTGGGCCGGAGACTGAAAACCGAGGCTGCCACTTAGAGAAAGTAGAGTTGGGTCACCAGTGCTGCTCCTGGGGCTAAGCCAGAGACCCTCACGTGAGGAACGGGGGAGTTGAGGGCAAAAATCCTGATGAGAAAGATTGAGAGACCTTTTCTGGTCACTCTCCTCAGCAGCACCTCAGTTATTCTTGGGGCTGCACATCTGAGCAGCTATCTAGGACGCCCTTCCATAGTGGCTCCTCCAACTGCTTTGTCACTGTCTCCAGCCGTCTTCACTTGTGTAACTCACATTCTGGGGCCTGTTGTCTTTGAGATCTGTTCCTTATCAACTTTTCAATCCTTTCCCAAGTCCGTTCTGTTTCTTGCTTTGGTTTAATTCCCCAAGCCATACCTTCTAGATTTCTGTCAGCATAGATGCGCCGAAATTGAACCCGCACGGTTCAAAGAAAGCTTCCTCAACAATGTTTTAAGACTAATGGTATTTTTTTTAAGCATACCAGTATAAGTATTTTTAAAGGTATTTTTCAAAGTCATAACAATGATTGTTTTATCTCACAGAATAGACTATCATGGGATAAAGAATGGTCCCTAGCTTCTATTTTTCAAAATAAGTAGGACATGTTCTTGGACTTAAACTATTAAAAGTTAACTCTCCTAAAAGAAAAAAGAAATATATTCAGCTTGCCAGAACTTTTTGTTGGCATGAGATTGGGGAAGAGAACAGGAATGCCAGGATTAACATTCGGACGGCCCCAGCTGGGTCTCACTAGGTTTGACGTGAGCACCTTCCACTCCATTGGAGAAACTGGCTATTCTGAACAGTTAGTTGGTTGGTCGGGCGTTTAGCTTTGAGGCTCCTGAACAGAAAACACTGTTGGAAAGAGTCACCCATGACATCACCAGCGTCAGTGGGGAGTTAGCCTCTGAGTTCAGTGTATCACGTTACTGTCTAATGCTTTGTGCAGAATTATTTTGGCTTTTGTCATTTAGCCAAATAAAGGCCACGCGTTTTT
>XM_008768694.2
GTGGGGGGAAAAAAAACCTCCACAAAACAAAGTCCACCCCCCCTCGACAGTTCACCGTAGGAAGTTCGTTCTTTAGACCACACCCTCGCCGGTGCATTTGTGCCCTGGTCTCTACTCCTGCTCGACTACTTCCCCGGTCGATTTCTAGGGATCATTTTCTGGTGAGTCAACCTAGGTCAAAATAACTGGAAGAAAGAGGGTGATCCAGACCCGAGTTCTCCTGACGTGGCTAGCGGGCTCGAACGCTTCGGTGAAGTCGGACTTAGGAGCCAGCCCTGTGGAGAGTTCGAGGGGCGACCGGCGCAGGGAGACCACAGGCCGAGCGCGCGCTGGGGCCGCAGGAGGTGCTACACATCCGGAATTCCGGGGCGGCTGACCCCGCGCCAGTGCTTCAGCTCCGTCACTCCACACGCCCGGCCCTGCTGGAAGCGGAACTACTCTGTCAGTTAAAAGAAGATGGATGCACAGAGTTCAGCTAAAGTCAATTCAAGGAAGAGGAGGAAAGAGGTACCTGGCCCTAATGGAGCAACAGAGGAAGATGGAATTCCTTCCAAAGTGCAGCGCTGTGCAGTTGGTTTACGGCAGCCAGCTCCTTTTTCTGATGAAATTGAAGTTGACTTTAGTAAGCCCTATGTCAGGGTGACTATGGAAGAAGCCTGCAGGGGAACTCCTTGTGAGCGGCCTGTGAGAGTTTATGCGGATGGAATATTTGACTTATTTCACTCTGGTCACGCCCGGGCTCTGATGCAAGCAAAGAACCTTTTCCCTAATACATATCTCATCGTGGGAGTCTGCAGTGATGAGCTAACGCACAACTTCAAGGGCTTCACTGTGATGAACGAAAATGAACGTTACGACGCGGTGCAGCACTGCCGTTACGTAGACGAGGTGGTGAGGAACGCCCCCTGGACTCTGACGCCCGAGTTCCTGGCGGAGCACCGGATTGATTTCGTCGCCCATGACGATATCCCCTACTCTTCGGCAGGGAGCGACGATGTGTATAAGCACATCAAGGAAGCAGGCATGTTTGCTCCCACACAGAGGACAGAAGGCATCTCCACATCAGACATCATCACCCGCATTGTCCGTGACTATGATGTGTATGCAAGACGGAACCTGCAGAGAGGCTACACTGCCAAGGAGCTCAATGTCAGCTTTATCAACGAAAAGAAATACCACTTGCAAGAACGAGTTGATAAGGTAAAGAAGAAAGTGAAAGATGTGGAGGAAAAGTCAAAAGAATTTGTGCAGAAAGTGGAGGAGAAGAGCATCGACCTCATCCAGAAGTGGGAGGAGAAGTCCCGAGAGTTCATTGGAAGTTTCCTGGAAATGTTTGGTCCAGAAGGAGCGCTGAAGCACATGCTGAAAGAGGGAAAAGGTCGGATGCTGCAGGCCATCAGTCCCAAGCAGAGTCCCAGCAGCAGCCCTACTCATGAGCGCTCCCCCTCCCCCTCCTTTCGGTGGCCCTTCTCTGGCAAGACTTCCCCATCTTCCTCCCCAGCAAGTCTCTCTAGGTGCAAGGCTGTGACCTGTGACATCAGCGAGGATGAAGAGGACTAACTTTTCATCCCTGTTCCCTCTCTCTCCCCCTGCCCGTCACCTCCAGAAGCTCTGTCGAATTCCATTTTGTGATCCCAACACTAAACCTAAGGACATCTACAAAGAACAGACAAACGGGGCAAGAGGACCTGGGAACGGGGGAACCAAAACAGCCCATGCCCTGCCTGAGACATTCTCAGCCACACCACGGAGGCTGCCCACACCTTAGAAGCCTGCTCTGCATCCATCTTTCCTCCCCAGAACGTTGCTTTACTGTTTATTGCTCATGTAATCTTGACAGGGAGATTGTCATTTACATCATTTCTTTTAAAAAGTAGTCTTTCAAATATAGTAAGTACAACTAATTTTTTGCCCCTGAGGAGTGGGCAGAAGAAGGAGGCGTGGAGTGCCCAGAGGCCTTTCTTCCTGAACACTAGTGCTTGCCTTCTGCTCCGAAGCAAAGCGGCTTGCCAGGTCCTTCAAACAGGGAGCCATGCTGCTGGGTAATTTGGGGAGAGTATCGTAATTTTAATGTCCCTAAAAAAATCTCAAAGCCGTATTAGCTCCAGATTCCCTGAGTGTCCTGCCGGCCCATGTGTCAGCGTGGCTGTGGGGGGAAGAGCTGTGAGCCTGACTTTTCTTACTCCCAGAGGAGTTTCTTGTCGGACCCAATGGGGTCCATGAAGACACTGATGGGGATGGACCCAAACCACAGAGCATCAGATGCAGTTTTTCCACTGTGTTCATCTTCTCAGCAAATCCTGTTGCCCAGTTATTCGGGAGCTCTTGCCAATCTCTTTCCTGCATCCTTCCTGTGAAGGAAGGGACACAGGGCTACTGTGACTGGAGAGAGGAGTGGGAGAAAGTCAGTCCGGCTCAAGAGCAGTTGGGGTTGAGTTCTGCTGAGCTCACGTCCCTCCCTGCAGCTGCCCTCTCAGCACGTCCGGCTTATACAAAGGATACTTTGTAAATGTTTGCAGCTTGCACTTGACCCGTCCTGGATCCATGCTGCTTATTGCAGTAGTCAGCACTTAGACTTTCACAGAGCACACAGGCAAAAGCACCTGGAAACACTCTCCTCAACCTCTGACCATCTTAGAATGTCCTTGGGTCAAATGAGTACCACATGGAGTCTTTGCTCCGAGAGCTGCACCTAGCAGGGATTTCCTCCAGTCCACCTCCAGAAGCAACAGGCACGGGTTAAAACTGCTAGCACACAGAGGTCATGCCCTCTTGCCTGCCTGTGGCTGGTGGCCCCAAGAGGAAACAAGTTGACTTTGAAATCAGAGAGTACTGACTCTCGGCACTTACTGTTGGGCAGGAGCCGGTGTTTCCGGCCCCTGGCACCCCATATCACTACATGGCCCAGCAAGCTCATGGCCATCAGTTATCCTGTAGCTGGATGTAGGGTAAAGTTGTTTATGTCCAGGGCCTACTAGTTGTCACTCATAAATACCCCTCGTGGGGGTGGAGCTTTGTGTTTTCAGCAAAGAAAACATTTTCTTTTTCCTCGTACCTCCTCACTGGTCCGTGCTGGGACTGTGAGCATTGTTCAGTCCTCCCTAGACACACGCTAGTGGAATCTGTGCTACTGCCTAAGGGTCTGAGGCTAGCACCACACAGTGCCTGCAGAACAGGACTACCTAGGCTTCTAAACTATCTCCCAGGCAAAGCTGAGCAGAGGAGAGGGGCAAAGAGGCACCCCCTGGTGTCCCAGTGGCCTGTGGAAACGCCATTGCTAACTCCTCATGAAGCATTGCTTTCTCTCAGACCTGATCCAGATGGCCTTGGCCTGGGATCCTTTCTCTGAACCTGTTGAAATTAGTCTTTTCTCACATTATGTACTGCGGAATGGCTCATTTTAACTTTTCTACTTTAGTCTTCTCTTTGGGGATCCGTTTCTCTCTGCCTTATTCTCCCAGGTATACAGAGGTGGTGATGTCACTGCTGGCGCTCACCTGCTTGTTCTCTCAGTGCGTGTCACTCAGGTGTGGCCTGTGGAAATGCAAAGGGAGCCATTCATGTTCGACTTTCCTCCATGTAGTCACTCAAGTAGACAGTCCCAGACATCAGAGCGTCTATGCTGACTCCCTGCTAGGACTAGCCGATGCTCAATACTCACCCGTTACTGTCTCCTAACACTCAGACAGTTTAGACATAAGCAAAGGCATTGGGGGTGTGGCTGCATGTATGTATGTGAGGGTCAGTGTGCTCCTTGGTGCTAGAAAAAGGTACTGTTGAGATGGTGCACCATGTGGGTAAGCTGTGTAACGCTCGATCTGTGATTCAGTCTGTCTAAGAAAGCAGCATGGAAGGGCCGGGGGAACCGTAAGTTGTTTGGCCTCACAGCCTCTATACCATATGAGGAGGCTGAAGACAGGAGCCCTGTGCCTGGGGTTGAGGAGGAGCCAGTGCAGCAGTTAACCTTGGCACGGGCTGAACAGGAAGTTTGCTTATTCGTATACTGGGCCGGAGACTGAAAACCGAGGCTGCCACTTAGAGAAAGTAGAGTTGGGTCACCAGTGCTGCTCCTGGGGCTAAGCCAGAGACCCTCACGTGAGGAACGGGGGAGTTGAGGGCAAAAATCCTGATGAGAAAGATTGAGAGACCTTTTCTGGTCACTCTCCTCAGCAGCACCTCAGTTATTCTTGGGGCTGCACATCTGAGCAGCTATCTAGGACGCCCTTCCATAGTGGCTCCTCCAACTGCTTTGTCACTGTCTCCAGCCGTCTTCACTTGTGTAACTCACATTCTGGGGCCTGTTGTCTTTGAGATCTGTTCCTTATCAACTTTTCAATCCTTTCCCAAGTCCGTTCTGTTTCTTGCTTTGGTTTAATTCCCCAAGCCATACCTTCTAGATTTCTGTCAGCATAGATGCGCCGAAATTGAACCCGCACGGTTCAAAGAAAGCTTCCTCAACAATGTTTTAAGACTAATGGTATTTTTTTTAAGCATACCAGTATAAGTATTTTTAAAGGTATTTTTCAAAGTCATAACAATGATTGTTTTATCTCACAGAATAGACTATCATGGGATAAAGAATGGTCCCTAGCTTCTATTTTTCAAAATAAGTAGGACATGTTCTTGGACTTAAACTATTAAAAGTTAACTCTCCTAAAAGAAAAAAGAAATATATTCAGCTTGCCAGAACTTTTTGTTGGCATGAGATTGGGGAAGAGAACAGGAATGCCAGGATTAACATTCGGACGGCCCCAGCTGGGTCTCACTAGGTTTGACGTGAGCACCTTCCACTCCATTGGAGAAACTGGCTATTCTGAACAGTTAGTTGGTTGGTCGGGCGTTTAGCTTTGAGGCTCCTGAACAGAAAACACTGTTGGAAAGAGTCACCCATGACATCACCAGCGTCAGTGGGGAGTTAGCCTCTGAGTTCAGTGTATCACGTTACTGTCTAATGCTTTGTGCAGAATTATTTTGGCTTTTGTCATTTAGCCAAATAAAGGCCACGCGTTTTT