Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps16
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S16
Also known as -
Coordinate chr1:85405499-85408444
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Involved in liver regeneration. Part of cytosolic small ribosomal subunit. Orthologous to human RPS16 (ribosomal protein S16). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps16

Retroname Coord Strand Genomic Region ENSG
Rps16P1 chr3:14872982-14873533 + Intergenic
N/A UCSC
Rps16P2 chr3:21983840-21984383 + Intergenic
N/A UCSC
Rps16P3 chr5:21471893-21472428 + Intergenic
N/A UCSC
Rps16P4 chr6:38235744-38236192 - Intergenic
N/A UCSC
Rps16P5 chr7:91442671-91443200 + Intergenic
N/A UCSC
Rps16P6 chr8:126132195-126132756 - Intergenic
N/A UCSC
Rps16P7 chr8:96570422-96570936 - Intragenic
N/A UCSC
Rps16P8 chr13:96164118-96164551 + Intergenic
N/A UCSC
Rps16P9 chr15:100303293-100303840 - Intragenic
N/A UCSC
Rps16P10 chr15:44779340-44779886 - Intergenic
N/A UCSC
Rps16P11 chr18:28696804-28697351 + Intragenic
N/A UCSC
Rps16P12 chr19:44267636-44268182 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001169146.1
GGGGTGGCCCCAAGCTTTCCTTTTCCGGTGGCGGCGCGGCGCGGTGAGGAGCTCGTGTTCATACTTGTAGCTATGCCGTCCAAGGGTCCGCTGCAGTCCGTTCAAGTCTTCGGACGCAAGAAAACAGCCACAGCTGTGGCCCACTGCAAACGAGGAAATGGGCTCATCAAGGTGAATGGACGTCCCCTGGAGATGATCGAGCCGCGCACGCTGCAGTACAAGTTACTGGAGCCTGTTCTGCTTCTGGGCAAGGAGAGATTTGCTGGTGTGGATATCCGGGTCCGTGTGAAGGGTGGTGGTCATGTGGCCCAAATTTATGCTATCCGGCAGTCTATCTCAAAAGCTCTGGTGGCTTATTACCAAAAATATGTGGATGAAGCCTCTAAGAAGGAGATCAAAGATATCCTCATCCAGTACGATCGGACCCTGCTTGTAGCTGACCCCCGTCGCTGCGAATCCAAGAAGTTTGGCGGTCCCGGTGCCCGTGCCCGGTACCAGAAATCCTACCGATAAGCCAGTCTCAAGGATCAGGGTTTACCTTTGTAATAAACATCCTGGGACTTTATATTTCTGTATTGTTGTCTCTCTTTGTAGTGTTTGGTTAGACAATGCAAGAGATACCTTTAATAAGTGGCTGTGGGGACTGGAGTGATGGCTGCCTTCCCACAGCATTTGAGCTCTgacctggtttctctccccccagctatcctggaactcactgtatagaccaggctggccttaaacccaagagctgtgcctgcttctgcttcaccagtgctaggattaaagaggtgtggactaccacattcagcGACTTAA