Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Higd1a
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name HIG1 hypoxia inducible domain family, member 1A
Also known as Hig1
Coordinate chr8:130482492-130491888
Strand -
Gene summary Predicted to be involved in mitochondrial respirasome assembly and negative regulation of apoptotic process. Predicted to act upstream of or within several processes, including cellular response to glucose starvation; negative regulation of release of cytochrome c from mitochondria; and positive regulation of protein serine/threonine kinase activity. Predicted to be located in mitochondrial inner membrane and nucleoplasm. Predicted to be part of protein-containing complex. Predicted to be active in mitochondrion. Orthologous to human HIGD1A (HIG1 hypoxia inducible domain family member 1A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Higd1a

Retroname Coord Strand Genomic Region ENSG
Higd1aP1 chr3:86613631-86614041 + Intragenic
 N/A UCSC
Higd1aP2 chrX:74057602-74059195 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_080902.4
AGCACTCGGGGGTGGAGGCCAGAAGCCGGCTGGACTGAAAGGGACGTCTCCTCTCCGAAGACTCTTCAAGAAATCACAATGTCAACCAACACAGACCTTTCTCTCTCTTCATACGATGAAGGTCAGGGGTCCAAGTTTATTCGGAAAGCTAGGGAGACACCGTTTGTCCCCATTGGAATGGCCGGCTTCGCAGCGATTGTTGCATATGGGCTCTACAAGCTGAAGAGCAGGGGAAACACGAAGATGTCTATTCACTTGATCCACATGCGTGTGGCAGCCCAGGGCTTTGTTGTGGGGGCCATGACTCTTGGTATGGGCTATTCCATGTATCAAGAATTCTGGGCCAAGCGTAAGCCTTAGAAGAGCTGCTGCCTTGGTCTGGGAAGTGCTTGCTTTAGTTAGACGTCTCATATTGAGGTTACATGTTTGTGTCTGCAATAAATAACATATGGTTTAGACAAAACACAGTATTGAATGTTGGTTTACTTTCTGGCCAACTTGATTTGCCTGGTGACCAGATTGTTAGTGACTGATTCACTAACTAGGTCGCTAAGGGGGTCAGGGTAACACAGAAGAAATCTGTCACCTGAAAGTACTTGGTCACAGTGCTTTCCTTACACCCTTATGATGAAAGTCACTGTAAGAAGGGCTGCTGGCAGTCCAGGCACACCCTGTGTGCAGAGTCGGCCATGCTTTGGGAGGGTGTCAGGAAAGAGTCATTTACTTTGTCTGCCTGTGGGCTGACTTCAGAACTTCAGGTCTTAAGGTTTGCTGGCTTCTGAAAACACTTTCTAAAGAGCCCATGAAATATAAATATAACTAACTTAGAAAGCCCTGTACCTCAGTAGGAGGGAgcgcgtgtgtgtgtgtgtgcgcgtgtgtgagtgtgtgtaacaacccagaaagctggtaagagctgcaGAGAGGCAGTGTTTATTAGATTCACACTTAGACACTGATTGTGGGTTCTGGTTTAGCTCTTTTATAATTGTAAAGTTATATTTTTGCTGCTTTGTAATAGGATAATTCTTAAGCATCATCTTAAAATAGAGGTATTTTGTTTCttttttgtggtgctgggcattaagtgcagggtctcacataggctaagcaagtgctgtgcactgagttgaaccccagcAGAAGTAGGTGCTGCAAGTGTAAAACAAGGCTAAAGGGCCTAATGCACCCAGCCTGTGCAGGCCGCGTGGCCACCGTCTATAAGGCCATGGCTATTAAAGTACCGAAGGTGAGAGGTGAACGGTGGGCGGGCTGGTTTTTCCAATATTTACATACAAATTTGGATACACAGAATATTAAATGCACTGTAAAATCCCCCTGTCCAACCTGAACTTACATTCCATCCACAGTGCCAAGATGGTGTATGTATTGTTATTAAAATAAGTCTGAACATA