Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Fxn
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name frataxin
Also known as FA|FARR|Frda|X25
Coordinate chr19:24236909-24257954
Strand -
Gene summary Predicted to enable several functions, including 2 iron, 2 sulfur cluster binding activity; ferroxidase activity; and iron ion binding activity. Acts upstream of or within several processes, including adult walking behavior; negative regulation of organ growth; and proprioception. Located in mitochondrion. Is expressed in several structures, including brain; cartilage condensation; heart; hemolymphoid system; and lower jaw incisor. Used to study Friedreich ataxia. Human ortholog(s) of this gene implicated in Friedreich ataxia; Friedreich ataxia 1; and type 2 diabetes mellitus. Orthologous to human FXN (frataxin). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Fxn

Retroname Coord Strand Genomic Region ENSG
FxnP1 chr7:95560144-95562595 - Intragenic
ENSMUSG00000108628 UCSC
FxnP2 chr11:7944162-7944322 - Intragenic
N/A UCSC
FxnP3 chr17:38324783-38325360 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_008044.3
GGAGCGGCCGCGGAGCTGGAGTAGCATGTGGGCGTTCGGAGGTCGCGCAGCCGTGGGCTTGCTGCCCCGGACGGCGTCCCGGGCCTCCGCCTGGGTCGGGAACCCGCGCTGGAGGGAACCGATCGTAACCTGCGGCCGCCGAGGCCTACATGTCACAGTCAACGCCGGCGCCACCCGCCACGCCCATTTGAACCTCCACTACCTCCAGATTCTGAACATCAAAAAGCAGAGCGTCTGCGTGGTGCATTTGAGGAACTTGGGGACATTGGACAACCCAAGCTCTCTAGACGAGACAGCGTATGAAAGACTGGCGGAAGAGACCCTGGACTCCCTGGCCGAGTTCTTTGAAGACCTCGCAGACAAGCCCTATACCCTGGAGGACTACGATGTCTCTTTTGGGGATGGCGTGCTCACCATTAAGCTGGGCGGGGATCTAGGGACCTACGTGATCAACAAGCAGACCCCAAACAAGCAAATCTGGCTGTCTTCTCCTTCCAGCGGCCCCAAGCGCTATGACTGGACCGGGAAGAACTGGGTGTACTCTCATGACGGCGTGTCTCTGCATGAGCTGCTGGCCAGGGAGCTGACTAAAGCTTTAAACACCAAACTGGACTTGTCTTCATTGGCCTATTCTGGAAAAGGCACTTGACTGCCAGCCAGATTCCAAGACATTAAACACTGTCAGGTGAAGACCCCCAGCCTCCTCCTGTAGCTGAATgtctgccttcccatacctgctCCTGAAGATAGTCACACCGTGTGTGACAGCTCTGTGAAAAAAGTGTGTTCCCTCCCACCCTGTCCCCGGACCTGGCTCTTCATTTCTACAGACATTTGTTAGGATTATGTCATTTGCTCCCCAACCTGAGACCTCTGGTCTCTTAGAAAGTCTtatatgctgggcagtggtggcgcacgcctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacagagtgagttccaggacagccaggactacacagagaaaccctgtctcgaaaaaaaaaaaaaaaaaagaaagaaagaaagtcttacACCACAAGTGTGTCCATGATATAACAGCCTCAAAATGTCTTACACTGTGTGTGCTAATAACCTACACCATGTGTGCTAATAACCTCCTGAAAAGGAAAAAGGCTCAGAGGGAGACATGAGTCGTTCCCACTCTTCCATTGTCTCTGAAAAGATACTCTAAAAGTAACTTCTAAATGTACCCAAGACTCCAAGTATGTACACTTCTGAGTCCTGAGCAGCAAAGAGTCAAAAGAAACCATCTTAAAATGCCCTTTCGTGCTTTGTCACCTACACTCGGTACCCAGGACCTGGTGCTATTAACTCTGTGCCTTCATAGTGGGGGTCATTTACACAGTTGGCAGCTACGACATGGACCTGAGatgtctgaaaattttgaaaattgagctgggcatggtggggcatgcctttaatcccagcaatcaggtggcagaggcatgcagatatctcggtgagtttgaggccagcctggtctataaatccAGGAGAGTCAGGccaattacacagagaaaccctgtctaaggaaAATACGAAGAAAATTTGAGCTGGAGAGATCACTTAGtccacacaagcatgaagactcaAGTTTGATCCTAGGCGTCCACGTTTAAAGCCCAGGCATATTCTTCACTCGGAAAGTGGAGATGAGGGGCTTGCAGCCTCAGCAGTAAGCCTGGGGTCTCTGAGAAACACTATTTCAAAGAAGGAAACTTGCCTGGCTTCAGTTGACCTGtcctacacatatgtgcacatgcactagTATagacataaacatgcacacaaattcacacatgtTAAATAAATGCAGAAATAACTACAGGCAAGGAGGACAGACAAAAATCCCTACCATAAACCAAAGAACTAAACAGTGTCATGGAGCCGAGGTCTCGGTTATCCATGAGAGAGATGTCTGTACTGGTACAGAGAGCCCGGCCCTTCATTTCCAATCTACTCAGGGAGAGGGTAGAATATAGCTGATACCTGACATCCAGTGGAGTGGACCTATCAGGCCATCCACAAAGCTCTCCTTGTTCCCACTGGGTAGGTGGAAGAAATGGTATTGTTCTTGCTACTGCTCTGTTAGAATTTCAGATGAATTCCTAGGGAGCTAGCAGCTGCCCCTTGCTCTCTCTGCTGAATCCGGAGCACCATTGCCCTGCCTTAAGTGTGACAGGCTGCGCTTTGTACTGGAAGCAACACAGCTCCAGAACACCCACACGGAGCAACTCTAAACTCGGGTTTGTTTCGGGTTCAGTTCGTTTCTAACTGAAGGAAAATTGAGAGCAGGGACTCTAGCCCAGTGTGaaggcttgcctagcatgcagaaggGCCCTAAAGTTCCATCCCCACACTACAAAGGGCTGAGAGATTTGTCAGTGACAACTCTTATGCAAATGCCCAGCAGAGGCTATGCAGGGTGAACTGAACACATTACATCATAGACAAAACAATGGAACAGTGTAAACAGGCTAAGTGACTATTTAAGATATTTCCTtcttcacaattttttttttagtctggTGGAAATTTTTGAGTGGTGTAAGTCGGTGCTAGAGAGATAATAAATAGGACCATGTGTGGACATGCCTATGGGTGTCCCTTTGTCTTcttatgaaagacacacacacaccccacaccccgcTTGACCCTTATCAGACCTTCAGAATGTGCACAGGGCGCGTTCTGAATGTGTATGGACGTTAGGGAGTCAGATGTTATGGGCTCCTCCTGGACCAGTTTTTGGACTTCTTAACTTTCACTTTATGTATTTCTCTGACTGGGTTTCAAGGCAGCCTCGATCACACTTAAGAGAGAGTATGAACACTGTGTTGTGTGAGTCAAGTCATTCTGAACTCCAGGCATGGGGATGCTCTTCTGTAGTCCTGGCACTTTGAACTCCAAGGCTCAAAGGTAAAAGAAGGATGGAAGTTTGGACTTGA