Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name PRICKLE1
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name prickle planar cell polarity protein 1
Also known as EPM1B|RILP
Coordinate chr12:42456757-42589755
Strand -
Gene summary This gene encodes a nuclear receptor that may be a negative regulator of the Wnt/beta-catenin signaling pathway. The encoded protein localizes to the nuclear membrane and has been implicated in the nuclear trafficking of the transcription repressors REST/NRSF and REST4. Mutations in this gene have been linked to progressive myoclonus epilepsy. Alternate splicing results in multiple transcript variants. A pseudogene of this gene is found on chromosome 3. [provided by RefSeq, Sep 2009]

Retrocopy(s) from PRICKLE1

Retroname Coord Strand Genomic Region ENSG
PRICKLE1P1 chr3:183613562-183616744 + Intergenic
ENSG00000243584 UCSC

Expression

Transcript Sequences

>NM_153026.3
GCACTCCGCCTGCAGCCCAGCTGCCAGCGCCGTCTCCCGCGGCCGCCGCCGCCCGACAGCGCGCCCGGAACATGCCAGCCTCGCGCAGCCTGCGCTGACTTCCCCGAGACGCGCCGCGGTCGGCACGGAGACTTTCTGGGCTCTGGATGGTTCGTGCGCTGCTCACCCTCGCCCACCCCTGACGCCGCGGAccgcagctcctcagccccgcagccccgcagcccagcagccccgcagcGGCGCCGAGGACAGTGCAGCCGAGTTGCGTCTCCCTCGCGCGAGCAGCCATTGTTTGATGTCCTGTGACTGAGAAACCAGGCTTTAAACTTTATGCCTTTGGAGATGGAGCCCAAGATGAGCAAACTGGCCTTTGGCTGTCAGAGAAGTTCCACATCAGATGATGACTCTGGCTGTGCATTGGAGGAGTACGCCTGGGTCCCCCCGGGCCTGAGACCAGAGCAGATCCAGCTCTATTTTGCTTGCTTACCAGAGGAAAAAGTTCCTTACGTTAACAGCCCCGGAGAGAAGCATCGGATTAAACAGCTTTTGTACCAGTTACCACCACATGATAATGAGGTACGGTATTGCCAGTCTTTGAGTGAAGAGGAGAAAAAAGAGTTGCAGGTGTTCAGTGCTCAGCGGAAGAAAGAAGCACTGGGAAGAGGAACAATTAAGCTTCTGTCCAGAGCAGTCATGCATGCTGTGTGTGAGCAGTGTGGTTTGAAGATAAATGGAGGTGAAGTTGCAGTGTTCGCCTCCCGTGCGGGCCCTGGTGTGTGCTGGCACCCATCCTGTTTTGTCTGTTTCACGTGTAATGAGCTGCTGGTCGACCTCATCTATTTTTATCAGGATGGAAAAATTCACTGTGGCAGGCACCATGCAGAACTGCTCAAACCACGGTGCTCAGCATGTGACGAGATAATTTTTGCTGATGAGTGCACAGAAGCTGAGGGTCGCCATTGGCACATGAAACACTTCTGCTGCCTTGAGTGTGAAACGGTCCTGGGAGGACAGAGGTATATCATGAAGGACGGCCGCCCCTTCTGCTGTGGCTGTTTTGAGTCTCTCTATGCGGAGTACTGTGAAACCTGTGGGGAACATATTGGTGTGGACCATGCACAGATGACCTATGACGGGCAGCACTGGCACGCCACGGAAGCCTGCTTTTCTTGTGCCCAGTGTAAAGCCTCTTTGTTGGGATGTCCCTTCCTTCCCAAACAGGGTCAGATTTACTGCTCAAAAACGTGCAGTCTTGGTGAAGACGTCCATGCCTCTGATTCTTCCGACTCTGCATTTCAGTCAGCTCGATCAAGAGACTCCCGAAGAAGTGTCCGAATGGGCAAGAGCAGCCGGTCAGCAGATCAGTGTAGACAGTCTCTCCTCTTATCGCCTGCTCTGAACTACAAGTTTCCTGGCCTCTCAGGCAATGCTGATGACACCCTTTCTCGAAAATTGGATGATCTGAGTCTCTCCAGACAAGGAACAAGTTTTGCCAGTGAAGAATTTTGGAAAGGCAGAGTAGAGCAGGAAACTCCAGAAGACCCTGAAGAATGGGCTGATCATGAAGATTATATGACGCAGCTCCTCCTCAAGTTTGGTGATAAAAGCCTCTTTCAGCCACAGCCCAATGAGATGGATATTCGAGCCAGTGAGCACTGGATATCTGATAACATGGTTAAAAGTAAGACCGAGTTAAAGCAAAATAACCAGAGCCTTGCAAGTAAAAAATACCAGTCTGATATGTACTGGGCACAGTCACAAGATGGACTGGGCGATTCTGCTTATGGCAGCCACCCAGGCCCTGCAAGCAGTAGAAGGCTTCAGGAATTGGAACTGGACCATGGGGCTTCAGGGTATAATCATGATGAAACACAGTGGTATGAAGATTCCCTGGAGTGTCTGTCAGACCTGAAACCAGAGCAAAGTGTTCGGGATTCGATGGATTCTTTGGCATTGTCCAATATCACAGGGGCTTCGGTGGATGGAGAAAACAAGCCAAGGCCATCATTGTATTCTCTGCAAAATTTTGAGGAGATGGAAACAGAAGATTGTGAGAAGATGAGCAATATGGGAACTTTGAACTCTTCCATGCTGCACAGGAGTGCAGAGTCCTTAAAGAGTCTAAGTTCAGAGTTGTGTCCAGAGAAAATCCTGCCTGAAGAGAAGCCAGTACATCTGCCAGTGCTCAGAAGGTCCAAGTCTCAATCCAGACCCCAGCAGGTCAAGTTTTCTGATGATGTCATTGACAATGGGAACTATGACATTGAAATCCGGCAGCCTCCGATGAGTGAAAGGACTCGGAGACGCGTCTACAATTTTGAAGAGAGGGGATCCAGGTCTCATCACCACCGCCGCCGGAGAAGTAGAAAGTCCCGCTCCGACAATGCCCTGAATCTTGTTACAGAAAGAAAATACTCTCCCAAGGACAGACTGCGGCTGTACACCCCCGATAACTATGAGAAATTTATACAGAATAAAAGTGCCCGGGAGATCCAAGCATACATCCAGAATGCTGATCTCTACGGACAGTACGCCCATGCCACTTCCGATTATGGCCTGCAGAACCCAGGAATGAATCGGTTTCTGGGACTCTACGGCGAGGATGATGATTCCTGGTGTTCTTCCTCCTCCTCCTCTTCCGACTCGGAAGAAGAAGGATATTTTCTTGGACAACCAATCCCTCAACCCCGGCCACAGAGATTTGCCTACTATACAGATGACCTTTCTAGTCCACCATCTGCACTTCCCACCCCTCAGTTTGGTCAGAGGACAACAAAATCCAAGAAGAAAAAGGGACACAAGGGCAAAAATTGTATTATTTCTTAACCAAGTAGTGATGCAGAGCATTTGTTTAAAACTTAGCCATTAACCGTCTGAATCGTTTCCTTTTCTTCCGTAGGAAAGTTGTGAAAATAGTTTAAAGTGCTTTCTTTGCCCATGTAAATGAGAACTCAACTGCTGTTTACAGTGTCAGATTAACATTTGAAAGGTGTGATTTCTCCAATTTACCCTCTTTGGATGGTGCCAGGTGGACGTGACATCTCGTGCCTGTCCGGTGCGGGTGCGTTACAGATGGACGTAGCTGCTTTGGTTTTCCAGTCCTCAAGGGAATACTGAAGATGCTGACTGAAGGGGATTGGATGTTGATTTTAGAAGATGGAGAACTCCAGCCACCTTTGTAAAGCACTAGTGTTTGTCATTTATGTAAGTCAGGTCGGCTCAGGTCTTGATAGTCCGTCTTGGTGTGAGGCATGCCTGTCACGATGACCTAGCTAACACTGTGCATCTTATTGTGAGGCCAGCTTGTCCCCTCGAACCCTCTTTGGCCAGGTAAACATTGTATTGTATCAGCGCCAGCTACAGATTGAAAAAAAAAAACAAAAAACATTGCTATTTATAACTTAGTATTTCATAGACTTAAGTGTATTCCTAATTTAACGGTGCAAATATTAATGTATATACTGTACAGTTCAGATTTTAAAGCTGATATTTTTATATCCCTGAATTGTAAGCCGTTTGTTACGCTGCAGTGCTAGATTTGCCAGGGAACCAGAATTTATGGATGAACTGATTGCTTATATTTTAGTCAGGGTTTATAAATGTAGATGGTCAAATTTACATTGCCTAGTGATGGAAAATTCAACTTTTTTTGATTTTTTTTTCCAATATTAAAAAAGGCTCTGTATGCATGGTGGGGCTATGTAAGTACTCTTTAAAACTATGGCCCTATTAATCTTACAAGTGTTACTTATGGGTCAAGCAATGTAAACTGTATAAATGTAAAAACAACCCCTCCACACACATAACCCCTGGAATATATGGTAAAAACAAGTAGAAGCTGTTTCAGCGAGTGGGTTTTTTCCCCCTGCCTGCGGGGGGTGCCTTTCTCATTTTCAGCAAGGTGATGATTATCTCATGGGAAATGACAAAGATCTGCTTTTGTGGCAGAGGACTTTGTAGATTTGTTATTTTAAGAGAGGTTATTCCTTTTTATTCCTTCCCTCCCACTAATTTGTTGGCCTTTAACAGCAATTTTGAAAACTGGGTCTTCTGGTTATGTTTTTGTTTTAAAATCTTTAAATTAGAGGATGCTGTGCCATTGAGTACTGTAAGTTAATATGAGGTTCTGGTTCAAGGAAAACTTACGTTGGATCTGAACCAATGAGCAGATATTTTGATATGTGCCACTCTTGCATATACATCTCAGTCCTAACTAAAGGTTCTAGTGGCATCCAGGACCTTTAGGGAGGCATTTAATAAACACTTAATAAATAACAAAACTACCTTTCTGAATATAAATCTTTGCAAATGTATCCAGATAACTTCCATTTTGTGCCTGTGTTCAGGCATGATTTATTTTGCAGTTGCCCTACCATTAACAGACCTCCATTTGTCTCGTGTGTCCACACGCCCCACTTGTAGGCCAGAAATAGGGCTTCAGACACAGAGGCTTATTTTTTCCATATAGACTGGAGTGGGGAAAATTTGGCCTTAGGGAGGACAGACACAAGTCCAATGGGTAAACCAGCGAGTAGTAGGTGGACAGCCGTCCCACACAAGGGTTTGTATCTGGGCTACACAGATTCCCTTCAGAAAAGCACCAATGGTGAGAGAGTTCTTCACTCAGTAACTTACATTCCCTGGTCTGGTGCCTTTAAAAAACCATCAGCAAtgaaaaggaagtgcatacacatgacaaaaaaattcaaatagggcaaaagtcagagacagcatctcctttccattcttcatcccagtcccccaggtcctctccccagaagtaaccactcttacccagttttagtgtctccttcagacattcaaagcacatTCGTATAAATGTGTCTTTTAAAAGTGGTAGTGACCTATATgtgctgtgacatgcttttttccctttgtatgtggacatttcacgttagtgcatataggtctacccattctttcagtgactgcttaatagcctactcctaatgatggaGTTGACTTTCCTCATACATTATGCTACACTGGCACATGTGCACataaatcgggagcagcgtagttactgggacaaaggttacgtatttaagactgatggatattgccaattttcctccaaaagaaattctcctgatttacattaatgtaatgtaaatgagagtgtttgttccatcacaacctctcaatgtattagcagatttcttgattttGAAGAAATTTTCAGAACCTGTGCTGCCACAAGTGGGCATCCTTTTAGAAAAGACTGTTGCAATATGTTGCTTATAAAGGATGGATAATAAATAGTAAACAGGTGATACTTAGCCTGAAGAAATGCAGGTATAAGGTGAAGGTACTGCCCTCACTTTTCAAGTACATTCTCAAAAGATAGGGGTAACATAGCCTGCCAAAGGCTTAAGGAAATGCAGATATTTATTCACAATAATAATGTGACtttcttttccttttttttttttttttgagatggagtttcgctcctgttgcccaggctggagcgcaacggcacaatctcagttcactgcaacctctgcctcccgggttcaagcaattctcctgtctcagcctccggagtagctgagattacaggtgcctgccaccatgctcggctaattttttatatttttagtagagacagtgtttcaccaagttggccaggctggtctcgaactcctgaccttcaggtgatccacctgcctcagcctcccaaagtgcaggggattacaggcatgagccactgcgtctggcAATAATGTAACTTTGAAGCTTAAAAATTAATCCCAGTTTGTAGCAATAACAGAAGACTATCTACAACGGAAGAAAGAAGCAACTGCCTTACAGTTCTGTAAAGAATTGGCAAGAAAATAAAGCCTATAGTTGCCGA