Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ggps1
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name geranylgeranyl diphosphate synthase 1
Also known as 1810026C22Rik|9530089B04Rik
Coordinate chr13:14224375-14238319
Strand -
Gene summary Enables geranyltranstransferase activity. Predicted to be involved in isoprenoid biosynthetic process. Predicted to be located in cytoplasm. Orthologous to human GGPS1 (geranylgeranyl diphosphate synthase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ggps1

Retroname Coord Strand Genomic Region ENSG
Ggps1P1 chr14:3117824-3119766 + Intergenic
ENSMUSG00000114252 UCSC

Expression

Transcript Sequences

>NM_010282.3
TGCGTTCGacgagagaggggaggggaaggaggcgCGGCCATGAGGCAGAGGGGAGGTGGCATACGACGCCTGCGCAGTGTGATAGGGATGGCGTATTTTCTTGCACTGAGTGCTGCGGCGTCGCTGGCCGCTGAGGAGGGCAGAGATTTCTGTGTGAAATAGTGGGAGGGCTCCAAGGAAGCCTCTTGAAGAGCCGCAGTCAGAACAATAAATTGAGAAGTCGATGTGGGCACTGCTAGTCTCGTACCGGCGGCGGCTTCAAGTCTGAGATCATCGTGGAACCGTCAGCTTTGAAATTTATAAAACATGGAGAAAACTAAAGAGAAAGCTGAGAGGATTCTTCTAGAGCCCTATAGGTACTTACTTCAGTTACCAGGTAAACAGGTGAGAAGCAAACTTTCACAGGCATTTAATCACTGGCTGAAAGTTCCAGAAGACAAGCTACAGATTATCATTGAAGTGACTGAAATGTTGCATAATGCCAGTTTACTCATTGATGATATTGAAGACAGTTCAAAGCTCCGACGTGGTTTCCCAGTGGCTCACAGCATCTATGGTGTCCCATCTGTCATTAATTCTGCCAATTACGTCTACTTCCTTGGACTGGAAAAAGTCTTAACCCTTGATCACCCGGATGCGGTGAAGCTTTTCACACGCCAGCTTCTGGAACTTCATCAGGGACAAGGCCTCGATATTTACTGGAGGGACACCTACACTTGTCCAACTGAAGAAGAATATAAAGCCATGGTGTTGCAGAAGACAGGTGGTTTGTTTGGATTAGCAGTAGGTCTTATGCAGCTGTTCTCTGATTACAAAGAAGATCTAAAGCCACTGCTTGACACACTTGGGCTCTTTTTCCAGATTAGAGATGATTATGCCAATCTACACTCCAAAGAATACAGTGAAAACAAAAGTTTCTGTGAAGACTTGACAGAAGGGAAGTTCTCATTCCCCACTATCCATGCCATTTGGTCAAGGCCAGAAAGCACCCAGGTACAGAACATCCTGCGCCAGAGAACAGAGAATATAGATATTAAAAAGTATTGTGTGCAGTACCTGGAGGATGTAGGTTCTTTTGCATACACTCGACACACTCTTAGAGAGCTTGAAGCTAAAGCCTACAAACAAATTGAGGCCTGTGGTGGGAACCCTTCACTAGTGGCTTTAGTCAAGCACTTAAGTAAGATgttcacagaagaaaataaataatactatCCTTTCTGGATTAGACTCAGTAGCTTCTTTCAGTTGAAAATGAGGAGTGGCTTCATcccatttatcttttcttttttttttttttaagatttatttattatatgtaagtgtagctgtcttcagacactccagaagatggagtcagatctcattacggatggttgtgagccaccatgtggttgctgggatttgaactccagaccttcagaaagCCAccatcagaagagcagttgggtgctcttacctactgagccatctcaccagccccaccatTTATCTTTTCAAGTACTAGACTCCAATAATTGAGTAAATGAGGGTGACGTGTGTAAAAGTGTTATGTTATCAAAATCCCTttgcataaaaatacaaaattgagggctggagagatggcttagcagttaaaaagctgcttttccagagaaccccGGTTCAATTTCCAGGGCCCACAGTGAAGTTCAccaacacctgtaactccatttccagatcATCTTCTGGACttttcaggcaccaggcacacacataggtATACAAACATGCACAATATTCAGACACAtaagatatttaatttttatttttttaaaaacaaagttgaAACTATCAGGAATCACATAACGTAGGTCATAAATGTCAGACACTAAGTGTGACAGCTCTTCCTACGACCCCACGTGCTCTGGGCTTGTCAATAAAAAAGACTGATCTTCCAAGAAACTATCTGCTTTCTAACTATATGACATGGAGGGTTCTCAGTCCATAGATGACAATTCAAAACAAGTCTCTTTAGCTAACTGACTAAAAAGACCAAAGAACTGCTGTTTTTCCCTAAATGATAATGCCAAGAGTACCTCAGTTTTGTCTCTGAAGACCTGTGTCAAAGtctgaaaagacagaaagaatgcaCAGGCACTCTTCCACCCAACTTGTTTGTTTCAATGCTTGACACCCCACAAATTGTCCTTTTTAACAAAAGAGGCTCCACTTAGTGAAGTTCAATTCACAACCTGGTTCCattgtttttttctggtttgtttgtgttttttcttgtAACATTTTTCTACCCCAAACTGATTAGTATCTGTGATTAATGTttctttgaaggaagaaaataatagaaaaggtGTTTGTGGAGTACATGAGTAATGCCAGCATTCCATTGGTAGAGTCAGGAAGATCAGAAGCTCAAGGTTATACTCAGCTATATATAAGTTTGTGACCAGTCTGAACTACAGGGGACATtgcatcaaaagaaaagaaaaagaaaaaactgatatatattttttttaatttcttgagacaggtttcACTCACTATGCAGttctagctggcctagaactcaagggTCCATCAGCTTGGCTTCTGCCTCTTTGAGAGCTAGGATCAAATGTGTGTCCTACCATGCCTGGCAAAGACTCTGTAAGTCAATTTATTTCCTTGcctaattaaattaattttggcCTGGTACTTAATAGTGAATTAAGGACCTTTTTAGAGTCATTTTGTCTATCCAATAATCAAAATCTCGTTCTTTATTTGGTCTATGGTTCCCAAATGTTAATTCAGAAGAGAcccaggaagctggagagatggctcagaggttaagaacactggctgctcttccagaggaccctggttcagttcccagcacccacatggcagttcacaactgtctgtaacttcagttccagaagatctaataccatctcacagacatacatgtaagcaaaatacaaatacacattaaaaaaaaattatctgaagAGACCCAGAACATGAGTAGCTGAGTTCATTTAATAAAATGACTTTATTTGCTTAGATTTGTGCTACAATAATGCTTTTCCTGCCTAAGAAAGTCTTGAGATATCCTCTTCGAGAAATGTTGGATTTTGCTGTGTCAAAgacatactttttgtttgtttgttttgttttgttttttgagacagagacatacTTTTTAAACAATATAAATTTTCTAATTTATGCAGCTTCAGAAAAACATTAAGTTTTTATATCAAATCTGCAAGAATAAAGGTCAGTTGTATTGCcataatgtttttttctttcctttgatgtCTAAACTATTGTTGACCTCACTATTTTCCTTCAGCCTTTTCCTTCCTGGGCCAGCCAGTGCTGCTAGGGAATGGATTCCTGTCTGCTCTTGTAGCCACTGCTGCCTTGTTGAGCAACTCCTGTCCTGGGTAGCCTGTATCATtggctcttcttcctttcctagcaGAAAAGGAGATTCCTCAACTAGCAATGGAATGTCCCTTATTATCTTTTTCTGTTCTCCACCTATCAAATGTGGAATctcctacctttctttcttcaaatttttTACTTCAAATCTGCCTTTAAGTAGTCAGCCTTTTATTTCCAAAAATGTAAACCAGATgagatggcacatgcctgtagtaTTAGTTCTTAGGGGAAATAGAGATTAAAAGTTGAGGGTCCTGATTGGCTACATAGTGGGCTAGAACTAGCCTGGATTTTGTTAGAATTTGCCCTGCAGCCTTAGGCGAAAGGAGCTCTTGAGCTCTAGAGGCCTTGTAACATCCCAGGCTGTAATTCTCAGGCATCCTAAAGCTCATTTTAAGCTATGTGATAAGAAACAGGGGAAAGACACGTATATttatacaactttaatcccagcactcaagtggCAGAAGCCGGCAGATCTCTTATCATCTGGtatacagagaaagttccagacaGAGCAGCATAGTGGACtgactgtctgtgtgtgtgtgtctctctctctcaaaaaaaaagcttcaaatacaaaaaaaaaagggctcAAAATAATGAACCCTACAGTAGTATGAGTTCATGTATAATAGAGTTAGCATTTTGCTTCCTCAACCCTAACACCCCACTTGGCTAAACACAATCACTCTGCTTATCTTAATTCatctttttatatttacattcaaTATGTTGAGAATGAGCTATAATGTGAAGGCATTGTTTGACCATGTActacttggttaaaaaaaaatacaaaaataaaataaaatcactgataTAAATTTCAATGTTAATTTGCTCAACTCCGCTCCGTACAGTATTTCCTAACACTTAATTGGCACTGACACAGAAGTGGCTAGTTgtttgtcattcttttttttttatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgttgtttgtttgtttaatgtagcCCTTGTTGGGCTAGAACCTGATTTGTAGATCTGAGCTCAACTCAGAGATCTTTGtcagagtgcagggattaaacaCATGTGCCATCACTCCCAGCAAAGGCTATTCTATGCAACACTACTTTAGAAGAATCACCAACTTTGTATTGTTTATCACTGTACTTAAAAAGAAGGCTGTGTTTGAAGAAATAATCTATGAAACAAGGTCGTTGAACCTCTTTTGGGTGAaggtcttagtcactgttctattgttgtgaagagataccatggccaaagcaattcttataaatgaaagcatttaatttggggatctgcttacagtttcagtcaGTCTGTTATCAGCTAGTAGGAACATAGTGTCACTCATGGCCCTGGAGTAGTGGCTTAGAACTGTGtcctgatctgtaggcagcagaTTCGGTCTGGCATGAGGTtctaaaacctcaaagtccactccagtgacacacttcctccaacaaggccacacctccaaattctaattttgtcaaagaattgcactccctggtgactaaggattcAGATATATGAGCCTAGAGggtcattcttatttaaaccaccacagtgaggTAGTTCAGTACTAATGGTAAGCTGTTAGATGGTGTGGAAATTTTTTTGAAACTTGCCAGTTGCTTAATAGAAATTGTAAATTGGGAATAAACATTTCAGCAGTGTTTTAAAGAG