Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name SHLD1
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name shieldin complex subunit 1
Also known as C20orf196|RINN3
Coordinate chr20:5750286-5864395
Strand +
Gene summary Involved in negative regulation of double-strand break repair via homologous recombination; positive regulation of double-strand break repair via nonhomologous end joining; and positive regulation of isotype switching. Located in site of double-strand break. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from SHLD1

Retroname Coord Strand Genomic Region ENSG
SHLD1P1 chr1:88923410-88924026 + Intergenic
 ENSG00000235308 UCSC

Expression

Transcript Sequences

>NM_152504.4
GTTCCGGTTGCGGATGGTGAGTGTGTCGGGGGGCTTGGCGGCTTTTCTCCTCAGTTTTCTGGAGTGCTTTGGAGGAGAGGACTATGGCAGCCAGGGACGCCACTTCAGGCAGCCTGTCAGAGGAGAGCAGTGCTTTGGACCTGCCATCAGCGTGTGACATAAGAGATTACGTCCTGCAGGGACCCAGCCAAGAAGCCAACAGCGAGGCTTTCAGTTCTTTGGAATTCCATTCTTTTCCTTATTCTTCTGATGTGGATCCAGACACCAGTAACTTAAATATAGAACAAAATAACTCCTGGACCGCTGAGAACTTCTGGCTTGACCCTGCTGTGAAAGGCCAGTCAGAGAAGGAAGAGGATGATGGCCTTCGGAAATCCCTGGATAGATTCTATGAAATGTTTGGTCATCCACAGCCAGGCTCTGCAAACTCACTCTCTGCATCTGTCTGCAAGTGCCTGTCTCAGAAAATCACTCAACTAAGAGGCCAGGAGAGCCAAAAGTATGCCCTCCGCAGTTTTCAAATGGCCCGGGTGATCTTCAACCGGGACGGCTGCTCCGTCTTACAGAGGCATTCCAGGGACACCCACTTCTACCCACTGGAGGAAGGAAGTACATCTTTGGATGATGAAAAGCCAAACCCAGGACTGTCAAAGGATATTACTCATTTCCTCTTGCAGCAGAATGTAATGAAAGACCTGTAACTGGTGCCGGGCAGTGTGCAGGGTAGTAATGGAGGTGCTGTGCCATGACCagcagtgttggtggccacccagatcccctagggtctctggccagctctgtgtgcccaatcccaattaagtgctttgaggttaaaggctggcacctgtgacctggtattggagccagtcagcccatatggagagccagcagggtctgggagttctccgtcctcttggccaaggccgctgactgactgggctacgagtcaaaagcccagctcccttgcctcaaggaaggacattctctgaggagtaatttatgctctagcactccctttcctctagatcggcctgaggctgggacattacatgaaatcacacccttgctgggcttaatccctttccctaccctcccatttatttactggtgtctctgggagcctttccttaataaacctcttatatctgaatccttgactcagagtctacttctgggagaattcaccctgagaGAACATGCTTCTGTGAGATGAGGTTTTAGAAGGATACAAAGCTCTACACCGAATCAGGTATAAGGAATTATATCAAGTTGTAAAACTGAGACCATGTCATTGAGAATACATGTCCTAAAATAATATAAAGATTGAAATACAGTTGAGAAAAGTATATCACATCTTGATCACACCCTTGCCTCCTCTCCAAAGCTAGAAATCCATGTTTTATCATACTAACTGGGTGTGGAAGGAACATTTGGACAATCTAAAATAACAGCGAAAATTCACAATTCTTTTTAAAATCTCTTGTCTTTTATCAGATTGCAAACGTGAAAGGTGAGAAGGTAACAAATGTGCACCACCCACCACAGTATATGTAAGCACAATTATGCTACGCTAGGCTGATGCCACGTGGCCTTGTCAAGTTGTGTTTGAAGAGAATAAATAATCCTTTGCCCA