Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name H3f3b
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name H3.3 histone B
Also known as 9430068D06Rik|H3-3a|H3-3b|H3.3B
Coordinate chr11:115912787-115921313
Strand -
Gene summary Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene contains introns and its mRNA is polyadenylated, unlike most histone genes. The protein encoded by this gene is a replication-independent histone that is a member of the histone H3 family. [provided by RefSeq, Nov 2015]

Retrocopy(s) from H3f3b

Retroname Coord Strand Genomic Region ENSG
H3f3bP1 chr1:178126879-178127935 + Intergenic
ENSMUSG00000104126 UCSC
H3f3bP4 chr13:99109941-99110635 + Intergenic
ENSMUSG00000114873 UCSC
H3f3bP5 chr17:53553056-53553236 + Intergenic
ENSMUSG00000117194 UCSC
H3f3bP2 chr3:104659695-104660617 - Intragenic
ENSMUSG00000089999 UCSC
H3f3bP3 chr11:58852637-58852883 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_008211.3
GGAGCGCAGAGCGGTTTGGTCGTTCGTTGGTGGAGTATCTGCCCGTTCTGCTCGCCGATTGCGGCTCTTGTTCGAGCGCTTCCAGCGTCGCCTCGGTCTCAGCAAGGGCCCCAGACTCGGCTTTGGGTGAAAAAAAATGGCCCGAACCAAGCAGACCGCTAGGAAGTCCACCGGTGGGAAAGCCCCCCGCAAACAGCTGGCCACCAAGGCGGCTCGGAAAAGCGCGCCCTCTACCGGCGGGGTGAAGAAGCCTCACCGCTACAGGCCAGGGACCGTGGCTCTGAGAGAGATCCGTCGTTACCAGAAATCGACTGAGCTGCTCATCCGGAAGCTGCCATTCCAGAGATTGGTGAGGGAGATCGCCCAGGATTTCAAAACCGACTTGAGGTTTCAAAGTGCAGCCATCGGTGCCCTTCAGGAGGCTAGCGAAGCATACCTGGTGGGGTTGTTTGAAGATACCAATCTGTGTGCCATCCACGCCAAGAGAGTCACCATCATGCCCAAAGACATCCAGTTGGCTCGCCGGATACGGGGGGAGAGAGCTTAAGTTGAAGCGGTTTTTATGGCATTTTGTAGTAAATTCTGTAAAATACTTTGGTttaatttgtgactttttttgTAAGAAATTGTTTATAATATGTTGCATTTGTACTTAAGTCATTCCATCTTTCACTCAGGATGAATGGGAAGAGTGACTGACTGTTCACAGACCTCAGTGATGTGAGCACTGTGGCTCAGGAGTGACAAGTTGCTAATACGCAGAAGGGATGGGTGATACTTCTTGCTTTTCATGATGCATGTTTCTGTATGTTAATGACTTGTTGGGTAGCTATTAAGGTACTAGAATTGATAAATGTGTACAGGGTCCTTTTGCAATAAAACTGGTTATGACTTGATCCAAGTGTTTAACCATACATCACTGTGATAGAATGTGGGCTTTTTCAAAGGTTGAAGATACAAGTTTTAGCCACAGTGTAacagtttcctttaaaaaaaaaaaagtaaacctgGCAGCTATAGAATACACTATGTGCATTTATAATAGCTATTTTATATATTGtagtgttcaacatttttaaattaaatgttttacattcacAAGTGGTGGGGAGTCTTGTCATTAAGGTGTGTGTAATTTAGTCCAGTTGGTATTTCCTGACTAGACTGCATTTGTTTTTAACAGTAGAAAAATGCTATGCGTATTAAACCTTGCATAAGTCCTCATTCTACCACATGTTCACTAACCCCTGACCCTCTGGCTGGTAACACAACACTAACGGGGATTTTATTTATAAGGGCTCTAGAGTAAAATAACAAGCTATTCACACCAGCATCATCTATTACTAATCTAGTTAGTGCAGCTTTTCATTGTGTTTGGTCTTAGGCCTAGATTGAGTTCGGTTTcgtttctttttaatctttaagGGGGAAAACTGTACAAGGTTTGTTTTTCCTTGTAGAGTTTATAAACATGGGAGTAAGAACACAGCTTCAACTTCTTGGACCTCTGCCAATGAAGATGGGTTAGGTTACACCTGGTTACTATACTGGCAAAATCCCTTTTATAGAGATGGCCTTCAAGTGGTTTTTAAAAGTATCCTATTGAAGTTTTTAGGTCAATTATGTATGTTGACTAAATTTACAAATAAACTTGTTTATTCAACTAAGTGTCAAACCTAAATTGAATATACAAAGCTTTTAATACATATGGAATCGAGATTCCTAGATTCAGCTATTTGCTTGGTAGAAAAGGCTAAAGTACAGAAAGCATTTGAACATCCAATACACTCTAAAAATGCAAGTATTTGCTGACACAATTCATGAGTCTGACAAAATCTGCTTGTGGTTCATGGGTGGGCTTAATAACTACAATACATGTTTGTTCCCATGGTTTtagaatatttgaaattttaagttTGCTGTTTTGGATCTTTCTAATAGGCCTTACAAATAAACTAGTAAGTTTGGAGTTTTTTTCCTGGGGAAacagttt