Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hmgn1
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name high mobility group nucleosomal binding domain 1
Also known as HMG-14|Hmg14
Coordinate chr16:95922788-95928925
Strand -
Gene summary Enables chromatin binding activity. Acts upstream of or within several processes, including nucleotide-excision repair; positive regulation of NAD+ ADP-ribosyltransferase activity; and response to UV. Located in nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; sensory organ; and skin. Orthologous to human HMGN1 (high mobility group nucleosome binding domain 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hmgn1

Retroname Coord Strand Genomic Region ENSG
Hmgn1P1 chr1:120752163-120753162 - Intergenic
ENSMUSG00000100761 UCSC
Hmgn1P9 chr11:104461291-104462473 - Intragenic
ENSMUSG00000082706 UCSC
Hmgn1P10 chr12:76198319-76199521 - Intragenic
ENSMUSG00000046580 UCSC
Hmgn1P11 chr14:82365823-82366141 - Intergenic
ENSMUSG00000115476 UCSC
Hmgn1P12 chr16:18756207-18757450 + Intragenic
ENSMUSG00000082130 UCSC
Hmgn1P13 chr17:34611287-34612457 + Intergenic
ENSMUSG00000083522 UCSC
Hmgn1P14 chr17:36562197-36563196 - Intergenic
ENSMUSG00000092317 UCSC
Hmgn1P16 chr19:34261202-34261770 - Intergenic
ENSMUSG00000118066 UCSC
Hmgn1P3 chr3:63812830-63813924 + Intergenic
ENSMUSG00000103905 UCSC
Hmgn1P2 chr3:102788089-102789183 + Intragenic
ENSMUSG00000105938 UCSC
Hmgn1P5 chr7:11600456-11601576 + Intergenic
ENSMUSG00000109762 UCSC
Hmgn1P4 chr7:103478934-103479906 + Intergenic
ENSMUSG00000083967 UCSC
Hmgn1P17 chrX:74518025-74519256 - Intragenic
ENSMUSG00000048709 UCSC
Hmgn1P6 chr7:118942745-118942928 + Intergenic
N/A UCSC
Hmgn1P7 chr7:120197885-120199110 - Intragenic
Intragenic
N/A UCSC
Hmgn1P8 chr8:22797100-22798012 + Intragenic
N/A UCSC
Hmgn1P15 chr17:50568037-50569101 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_008251.3
CTCCCACCGCCCCCGCGACGGGTCGCAGCAGTTCgtgtggtggtggcggcggcggcttGGCAGTGCGGCTCCTCGGTGACAGATCCGACGACGCACGCGTCTCCCACCCCGCGCCGCCACGATGCCCAAGAGGAAGGTTAGCGCGGATGGAGCCGCCAAGGCGGAGCCCAAGCGCCGCTCCGCGAGGCTGTCGGCCAAGCCCGCCCCTGCCAAGGTGGACGCGAAGCCGAAAAAGGCCGCGGGAAAGgataaagcaTCAGACAAAAAagtgcagataaaagggaagaggGGAGCGAAGGGCAAACAGGCTGACGTGGCTGACCAGCAAACCACAGAGCTGcctgcagaaaatggagagacGGAAAACCAGAGTCCAGcctctgaagaagagaaagaagctaaGTCCGACTAAGCATCCATCACGTCTGTCAGTGGTCCCGCCTCCCTTCTTGTACAATCCAGAGGAATATTTTTATCAACTATTTTGTAAATGCGAGTTTTTTAGTAGctctagaaacatttttaaaaggtgaggGGATCCCACCTCATCCCATTTTTTAAGTGTAAATGGTTTTTTTAAGAGGTTAAATCATTTGctggttgtttattttttggtaCAACCAGAAAATAGCAGGATACTGAATCAGGAGAGGCTGTGACTGTCtcgggggtcaccataacattcCGTAGATGGGGCTAGTTTTATATCCTATAATACAAAGTATACTAAATGGCAATTTGGCGTCTCAGTCGTGCATTCGTGTCTGAAATATTTTCAGTTCTATCTGGTCCCGTGTTTCTAGTAGAACCATTTTGTAAGAAAGCCAGTCCTTGGCCCTTGCCCTGTCAGAACTGTGATGTCTGTGGTCATGGCAGTCCATTTTCCTAACAGTTGTGATAATGTGCTGTGAAAGATGGAAGTCCTGAGTCTGTTCTGTGTGTGGCGTAACATTGTGAATTGGTGGGACTGAGGATTACAGGCATTTGGTTGTTGTGAGAGGTCTTGGGGGAACTTGCCGAGTCACTGGAACAAgttcaaagaaaaacaatacgTAGCTCTTCATTTGTGTACATGAACACAATGTGACTTCAGAGTTTGGGTACGTGAACACAGTATATGGCTCTTTTTGGGTACATGTAATAAAAATTGGAATGTCTGTACTCTGCTCCTCGACCAATAAAATCTGTTGTGAAAGAGTA