Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Hmga1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name high mobility group AT-hook 1
Also known as Hmga1a|Hmga1b|Hmgi|Hmgiy|Hmgy
Coordinate chr17:27775548-27782646
Strand +
Gene summary This locus encodes a member of the nuclear, non-histone high mobility group protein family. This architectural transcription factor binds to A-T rich DNA sequences and participates in enhanceosome formation, chromatin remodeling and regulation of transcription. This protein functions in many cellular processes, including cell growth and differentiation. Alternatively spliced transcript variants have been described. [provided by RefSeq, Oct 2009]

Retrocopy(s) from Hmga1

Retroname Coord Strand Genomic Region ENSG
Hmga1P1 chr11:120653619-120655219 + Intergenic
 ENSMUSG00000078249 UCSC

Expression

Transcript Sequences

>NM_001025427.3
GACACGGCTGGCGCGGGCGGGCCCGTCCCCCCTGCCCCTGGGTCGCTCTTTTTAAGCTCCCCTGAGCCGGGGCTGCGCTCCTCTAATTGGGACTCCGAGTCGGGGCTATTTCTGGTGTTGGCGCGGCTCCAAGAAGGCACTCACTGTGTGCTGCCCCACACATAGAGAAGGAGAATGAGCGAGTCGGGCTCAAAGTCCAGCCAGCCCCTGGCCTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGGGGCAGGCCACGCAAGCAGCCTCCGGTGAGTCCTGGGACGGCGCTGGTCGGGAGTCAGAAAGAGCCCAGTGAAGTGCCAACTCCGAAGAGACCTCGGGGCCGACCAAAGGGAAGCAAGAATAAGGGCGCCGCCAAGACCCGGAAAGTCACCACAGCTCCAGGGAGGAAACCAAGGGGCAGACCCAAGAAACTGgagaaggaggaagaggagggcatcTCCCAGGAGTCCTCTGAGGAGGAGCAGTGATCACCACTCGCAGTGCCGCCTGCTCCATAGCCACTGAGGAGCAGCTgtcccctgggactggaagccctgctcccaggcccctccccgcccccactgcACACTACCGCACCAGGCACCAGCTGCAGGCTCTGCTCCGCAGCACCCAAGGGAGCAGGATTCGGCTCAGTCCCTGTGCCCTCCTCCCGAACACACCTGCCCCATCCTGACAAGGCTAACTTCCCATTTAGCCGCAGCCCGACCTGCTGCGCACCTCCCTCAGAGCCGTGGCTCTCTGGGCGCTTTGTTTTGCGGGTCCCTTCTGCCCTGCTGTTCCTGGCTTCCCCGTAGAGGGTCCTGGGAGCATTCCCTGGCCTTAAGGGGCCCCAGCCCCATCTCACTCTGACAAGGCCCAGTGGCTGACCTAGCAGCAGCAGTGTGGTCAGGGCAGGGGATGCTTAGATCCCAGCATGTCCCCACCAAAGTATCACCGGGTGGGTTTCTCAGCCCCTCCTGCCCCACCCTACAGAGATCATGCACTGGGTTGGCTGAGCCCCTTGACAACAGGAAGTAGGATGATGTTGGCTCCACCCACTTTAATGTTCTCACCTGAGACTAGACAGATGGGGTTACCGCCCATCTCCAGAGTAAGGGCCTGTTCTCGCCTCCACCAAAGGCAAACGGGCACCAACACGCCTCCCCCAGTCCACTCTAGGCTGTTCCTTCCTCCCGCAGGGCACTAAGGAGCTAGCCTTGCCGCCCCCTCCTTTTcgctcctccctgccccccatgGTTCTGGTTCCATCTTCTCCTCTGTTCACAAACTACCTCTGGAcggttgtgttgttttgtttttgttccatgTTCATTCTTAGATACCCACTATTGCTGCTGCTACCAGCGTCAGATGTTCATCCTCCTGAATTTGCCTGTATTCTCTCCCCCACACAATACACTCGAGGGGAAGGGGGGCTGGGGCGCAGCAGACTGGTTACCTACCCCACACTAAGGAAGATGGGGCCCCACCCCGTGGATGCTGCAGCAGAGTGAGGATGGGGGCCCACTTTGATGGGAAAAGGGTGTAGGGCCACCTCCCCTTGttctgtgggggaggggtggccaGTATTTGTCCCAGCCTGGGGCTTCCTCCCTGGTTTCTTATTTGCAGTTActtgaataaaaaacaaatagcCTTTTCTGGACAG