Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hsp90aa1
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name heat shock protein 90, alpha (cytosolic), class A member 1
Also known as 86kDa|89kDa|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4
Coordinate chr12:110657470-110662829
Strand -
Gene summary Enables identical protein binding activity; nitric-oxide synthase regulator activity; and protein folding chaperone. Involved in several processes, including axonogenesis; positive regulation of nitrogen compound metabolic process; and positive regulation of protein kinase B signaling. Located in several cellular components, including growth cone; neuronal cell body; and ruffle membrane. Part of protein-containing complex. Is expressed in several structures, including 1st branchial arch; alimentary system; eye; genitourinary system; and nervous system. Orthologous to human HSP90AA1 (heat shock protein 90 alpha family class A member 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hsp90aa1

Retroname Coord Strand Genomic Region ENSG
Hsp90aa1P6 chr15:80360967-80361493 + Intragenic
ENSMUSG00000116345 UCSC
Hsp90aa1P8 chr17:69861223-69862092 + Intergenic
ENSMUSG00000117122 UCSC
Hsp90aa1P9 chr19:11415393-11416182 + Intergenic
ENSMUSG00000100615 UCSC
Hsp90aa1P2 chr3:18062911-18065665 + Intergenic
ENSMUSG00000082896 UCSC
Hsp90aa1P1 chr3:111015828-111016225 + Intergenic
ENSMUSG00000106487 UCSC
Hsp90aa1P3 chr4:28591651-28592016 - Intergenic
ENSMUSG00000084073 UCSC
Hsp90aa1P4 chr8:40171807-40174026 - Intergenic
ENSMUSG00000109789 UCSC
Hsp90aa1P10 chrX:96205259-96205633 - Intergenic
ENSMUSG00000081135 UCSC
Hsp90aa1P5 chr11:77184263-77187228 + Intragenic
ENSMUSG00000083899 UCSC
Hsp90aa1P7 chr16:9637765-9638064 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_010480.5
GGAAGGTTCCGGAGGCTTCTGGAAAGAAGCGCCGCGCGCTGGGCGGGCCCGCCTCTATATAAGGCCGGCGCAGGGGGCGGCGCGCCAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTGCGTGTTCATTCAGCCACGATGCCTGAGGAAACCCAGACCCAAGACCAAccaatggaggaggaggaggtcgaGACCTTTGCCTTTCAGGCAGAAATTGCCCAGTTAATGTCCTTGATCATCAATACCTTCTACTCGAACAAAGAGATCTTTCTGAGGGAGCTCATCTCCAATTCATCGGACGCTCTGGATAAAATCCGTTACGAGAGCCTGACGGACCCCAGTAAACTGGACTCGGGGAAGGAGCTGCACATCAATCTCATTCCCAGCAAACAGGACCGAACCCTGACCATTGTGGATACCGGGATTGGAATGACCAAGGCCGACTTGATCAATAACCTTGGCACCATTGCCAAGTCGGGCACCAAAGCCTTCATGGAGGCTTTGCAGGCTGGTGCAGATATCTCTATGATTGGCCAGTTTGGTGTTGGTTTTTACTCTGCCTatttggttgctgagaaagtgaCTGTCATCACGAAGCATAACGACGATGAGCAGTATGCCTGGGAGTCCTCAGCTGGGGGATCCTTCACAGTGAGGACTGACACAGGTGAACCAATGGGTCGTGGAACAAAGGTTATCTTGCATCTGAAAGAAGACCAAACAGAGTATTTGGAGGAAAGGAGAATAAAGGAGATCGTGAAGAAGCATTCTCAGTTCATTGGCTATCCCATTACTCTCTTTGTGGAGAAGGAACGAGATAAGGAAGTCAGTGATGATGAGgctgaagaaaaggaagagaaagaggaagagaaagaaaaagaagaaaaggagtctGATGATAAACCTGAAATAGAAGATGTTGGCtctgatgaagaagaggaggagaagaaggatggtgacaagaagaaaaagaagaagataaaGGAAAAGTACATTGATCAAGAAGAACTCAACAAAACAAAGCCGATTTGGACGAGAAATCCTGATGACATCACTAATGAGGAATATGGAGAGTTCTACAAGAGCTTAACTAACGATTGGGAAGAACACTTGGCAGTAAAGCATTTTTCTGTTGAAGGACAATTAGAATTCCGGGCCCTTCTTTTTGTCCCAAGACGCGCTCCTTTTGATctgtttgaaaacagaaagaaaaagaacaacatCAAGTTGTATGTTCGCAGAGTTTTTATCATGGATAACTGTGAGGAATTAATCCCTGAGTATCTGAATTTCATTAGAGGGGTAGTGGATTCTGAGGATCTCCCTCTAAATATTTCCCGTGAAATGCTGCAACAAAGTAAAATTCTGAAAGTTATCAGAAAGAATTTGGTCAAGAAATGCTTAGAACTATTTACTGAACTAGCAGAAGATAAAGAGAACTACAAAAAGTTTTATGAGCAGTTCTCAAAAAATATAAAGCTTGGAATTCACGAGGACTCTCAGAATCGGAAGAAGCTTTCAGAGCTGTTGCGGTACTACACATCTGCTTCTGGGGACGAGATGGTTTCTCTGAAGGACTACTGTACCAGAATGAAGGAAAACCAGAAGCACATCTATTTTATCACAGGTGAGACCAAGGACCAGGTTGCTAACTCCGCCTTTGTGGAACGTCTCCGAAAGCATGGCTTAGAAGTAATTTATATGATTGAGCCCATTGATGAGTATTGTGTGCAACAGCTGAAGGAATTTGAGGGCAAGACCTTGGTGTCTGTTACCAAAGAAGGACTGGAACTtccagaagatgaagaggaaaagaagaaacaggaagagaaaaagacaaaatttgAGAACCTCTGCAAAATTATGAAAGATATTTTGGAGAAGAAGGTTGAAAAGgtGGTTGTGTCAAACCGACTGGTGACATCCCCGTGCTGTATTGTCACAAGCACATATGGGTGGACAGCAAACATGGAGAGAATCATGAAAGCTCAAGCCCTCAGAGACAACTCAACAATGGGTTACATGGCAGCAAAGAAACACCTGGAGATAAATCCTGATCACTCCATTATTGAAACCTTAAGGCAAAAGGCAGAGGCTGACAAGAATGACAAATCTGTGAAGGATCTGGTCATCTTGCTGTATGAAACTGCACTCCTATCTTCTGGCTTCAGTCTGGAAGATCCCCAGACCCATGCTAACAGGATCTACAGGATGATCAAGCTTGGTCTAGGTATTGATGAGGATGATCCTACTGTGGATGACACCAGTGCTGCTGTAACTGAAGAAATGCCTCCCCTGGAAGGAGATGACGACACATCACGCATGGAAGAAGTAGACTAAGTCACCAGAACTATGTGTTTGCTTACCTTCATTCCTTCTGATAATATATTTTccatgatttttgtttatttttgttaacatttaaaacatcTGTGTGGCATGAAAACTAAGGGGAAGATAAAATTTCTACATGTGATACTGTGATACTATAGGTTTAACTCAAGAGGTTGATAGAGCGTTTGTTATAAGACGTAACGTAACCTACTGTTCATGTTTGCTCTGGTCTGAAGTGTTTAGCTGTTGAGCTGGATTCCTTAGGAGACCAAATTAAGATGGCTTAAATTAcatcttaaaattttcatttcctgtAGTTAATTCTGCATGTATTAGTCTTAGAAGTAAACACAAGTTAAAACAACCTGACAGGAATTCCCCAAGTGGCTTGTTTTCCAAAGTCCCGAGAACAACCCTAAGTTTCCTAGGTCTTGTAACTCAGCAAGGCTTGTGAATGGAAATAACAGTGCCCAATCACATTCTGctttaaaagataaatacagaGGAGAT