Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps13
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S13
Also known as -
Coordinate chr1:185328902-185331332
Strand +
Gene summary Enables 5.8S rRNA binding activity. Predicted to be involved in negative regulation of RNA splicing. Part of cytosolic small ribosomal subunit. Is active in synapse. Orthologous to human RPS13 (ribosomal protein S13). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps13

Retroname Coord Strand Genomic Region ENSG
Rps13P1 chr1:15240178-15240700 + Intergenic
N/A UCSC
Rps13P2 chr2:148597525-148597899 + Intergenic
N/A UCSC
Rps13P3 chr2:25713793-25714321 + Intergenic
N/A UCSC
Rps13P4 chr2:88386343-88386586 - Intragenic
N/A UCSC
Rps13P5 chr3:4341245-4341762 - Intergenic
N/A UCSC
Rps13P6 chr5:136356992-136357518 + Intergenic
N/A UCSC
Rps13P7 chr5:57657883-57658417 + Intergenic
N/A UCSC
Rps13P8 chr7:138045081-138045534 - Intergenic
N/A UCSC
Rps13P9 chr7:40387634-40388073 + Intergenic
N/A UCSC
Rps13P10 chr8:31557286-31557563 + Intergenic
N/A UCSC
Rps13P11 chr8:54967744-54968166 - Intragenic
N/A UCSC
Rps13P12 chr9:71337506-71337645 + Intergenic
N/A UCSC
Rps13P13 chr11:34233341-34233585 + Intergenic
N/A UCSC
Rps13P14 chr11:45356729-45357000 + Intergenic
N/A UCSC
Rps13P15 chr12:21836602-21837106 + Intergenic
N/A UCSC
Rps13P16 chr12:24172812-24173333 + Intergenic
N/A UCSC
Rps13P17 chr14:44615363-44615989 - Intergenic
N/A UCSC
Rps13P18 chr15:89660221-89660624 + Intergenic
N/A UCSC
Rps13P19 chr17:1871057-1871318 - Intergenic
N/A UCSC
Rps13P20 chr17:22550600-22550952 - Intergenic
N/A UCSC
Rps13P21 chr19:55875339-55875732 + Intergenic
N/A UCSC
Rps13P22 chrX:10094729-10095039 - Intragenic
N/A UCSC
Rps13P23 chrX:9406287-9406597 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_130432.2
GTTCTCTCTTTGCTTCCAGACCTCCGCCATCATGGGTCGCATGCACGCTCCCGGGAAGGGCCTGTCCCAGTCGGCGCTGCCCTACCGCCGTAGCGTGCCCACGTGGCTGAAGTTGACGTCTGACGACGTGAAGGAACAAATTTACAAGTTGGCCAAGAAAGGCCTGACTCCTTCCCAGATAGGTGTGATTCTGAGGGACTCACATGGTGTGGCACAGGTCCGTTTTGTGACCGGAAATAAAATCTTGAGAATCCTTAAGTCCAAAGGCCTTGCCCCTGATCTTCCTGAGGATCTCTACCATTTGATCAAGAAAGCAGTTGCTGTCAGAAAGCACCTTGAGAGGAACAGAAAAGATAAGGATGCTAAATTCCGCCTGATTCTAATTGAGAGCAGAATTCACCGGCTGGCTCGATACTATAAGACTAAGCGGGTGCTCCCACCCAACTGGAAATATGAGTCATCCACAGCCTCTGCTCTGGTGGCATAAATGCTGTTGCGTACACAAGCAATAAAATCACTTTGAGTAAA