Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Jup
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name junction plakoglobin
Also known as Ctnng|D930025P04Rik|PG
Coordinate chr11:100259682-100288639
Strand -
Gene summary Enables alpha-catenin binding activity. Acts upstream of or within cell-cell adhesion; desmosome assembly; and skin development. Located in several cellular components, including Z disc; adherens junction; and intermediate filament. Part of catenin complex. Is expressed in several structures, including alimentary system; musculature; nervous system; reproductive system; and sensory organ. Used to study arrhythmogenic right ventricular dysplasia 12 and epidermolytic hyperkeratosis. Human ortholog(s) of this gene implicated in cardiomyopathy (multiple); palmoplantar keratosis (multiple); renal cell carcinoma; and reproductive organ cancer (multiple). Orthologous to human JUP (junction plakoglobin). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Jup

Retroname Coord Strand Genomic Region ENSG
JupP1 chr16:8813192-8814257 - Intergenic
ENSMUSG00000116352 UCSC

Expression

Transcript Sequences

>NM_010593.2
GGTCCCTTTGCCTTTTGTTCGGTTACTGAGTTGCTGCCTTGGCCAGAGTCCGGAGCAGCCGCCGCCCGAGTGCGCCGAGCTCAGTTCGCTGCCCGCGCCGGCTCCCTCCCGGCCAGACCCGACCCCGATTCGGCTCAGCCCGGCTCCACGCTCAGCAGCCACCATGGAGGTGATGAACCTTATTGAGCAGCCCATCAAGGTGACAGAGTGGCAACAGACATACACCTACGACTCGGGCATCCACTCCGGCGTCAATACCTGTGTGCCCTCTGTAAGCAGCAAGGGCATCATGGATGAGGATGATGCCTGCGGCAGACAGTACACACTCAAGAAGACTACCACCTATACACAAGGGGTGCCACAGAACCAAGGTGACCTGGAATACCAGATGTCCACAACGGCCAGAGCCAAGCGGGTGCGGGAGGCCATGTGTCCAGGGGTCTCAGGCGAGGACAGTTCTCTACTGCTGGCCACCCAGGTGGAGGGGCAGACAACCAATCTGCAGCGCCTGGCCGAACCATCCCAGTTGCTCAAGTCGGCCATCGTCCATCTCATCAACTACCAGGATGATGCAGAGCTGGCCACCCGGGCTCTGCCTGAGCTCACCAAGCTGCTCAACGATGAGGACCCGgtAGTGGTGACCAAGGCGGCTATGATCGTGAACCAGCTGTCCAAGAAGGAGGCATCCCGCCGGGCTCTAATGGGCTCGCCCCAGCTGGTGGCGGCGGTGGTGCGGACTATGCAGAACACCAGTGACCTGGATACTGCCCGGTGTACCACCAGCATCCTGCACAACCTCTCTCACCACCGAGAGGGCTTGCTCGCCATATTCAAGTCTGGAGGCATCCCTGCCCTAGTCCGAATGCTCAGTTCCCCCGTAGAATCTGTCCTGTTCTACGCCATCACCACACTGCACAACCTGCTGCTCTATCAGGAGGGCGCCAAGATGGCGGTGCGTCTGGCAGACGGGCTGCAGAAGATGGTGCCCCTACTCAACAAGAACAACCCTAAGTTCCTGGCCATCACTACTGACTGCCTGCAGCTCCTGGCCTATGGCAACCAGGAGAGCAAGCTGATCATCCTGGCCAATGGGGGACCCCAAGGGCTTGTGCAGATCATGAGGAACTACAGCTACGAGAAGCTTCTGTGGACCACCAGCCGTGTGCTCAAGGTGCTCTCCGTGTGTCCTAGCAACAAGCCCGCCATCGTGGAGGCTGgTGGGATGCAGGCTCTGGGCAAGCACTTGACAAGCAACAGTCCCCGCCTGGTGCAGAACTGCCTGTGGACTCTGCGCAATCTCTCGGATGTAGCCACCAAGCAGGAGGGCCTGGAGAGTGTGCTGAAGATCCTGGTCAACCAACTGAGTGTAGATGACGTCAACGTCCTCACCTGTGCCACGGGCACCCTCTCCAACCTGACctgcaacaacagcaaaaacaagacGCTGGTGACACAGAACAGTGGCGTGGAGGCGCTCATCCACGCCATCCTGAGAGCCGGAGACAAAGATGACATCACAGAGCCCGCTGTCTGTGCCCTGCGCCACCTTACCAGCCGTCACCCCGAGGCTGAGATGGCCCAGAACTCTGTGCGCCTCAACTATGGAATCCCGGCCATTGTGAAACTGCTCAACCAGCCAAACCAGTGGCCACTGGTCAAGGCAACTATTGGCCTGATCCGGAACCTGGCTCTGTGCCCAGCCAACCATGCCCCTCTGCAGGAGGCCGCGGTCATTCCCCGCCTCGTCCAGCTGTTGGTCAAGGCCCACCAGGACGCCCAGCGCCATGTGGCTGCAGGCACCCAGCAGCCCTACACGGATGGTGTGAGGATGGAGGAGATCGTGGAAGGCTGCACCGGAGCCCTGCACATCCTCGCCCGGGATCCCATGAACCGCATGGAGATCTTCCGGCTCAACACCATTCCCCTGTTTGTCCAGCTCCTGTACTCCTCTGTGGAGAACATCCAGCGTGTGGCTGCGGGAGTGCTCTGCGAGCTGGCCCAGGACAAGGAGGCTGCCGACGCCATTGATGCGGAGGGCGCCTCTGCCCCTCTCATGGAGCTACTCCATTCCCGCAATGAGGGCACCGcGACCTACGCTGCTGCTGTCCTGTTCCGCATCTCTGAGGACAAGAACCCAGATTACCGTAAGCGAGTGTCTGTGGAGCTCACCAATTCCCTCTTCAAGCATGACCCAGCTGCCTGGGAGGCTGCCCAGAGTATGATCCCGATCAACGAACCCTATGCAGACGACATGGATGCCACCTACCGCCCCATGTACTCCAGCGATGTGCCTCTGGACCCTCTGGACATGCACATGGACCTGGATGGAGACTACCCCATGGACACCTACAGTGACGGCCTGAGGCCTCCCTACCCCACTGCAGACCACATGCTGGCCTAGCCAGCTCCACCTCAGCGCTGTTTCTCACCTGGAAAGCTCTCAAGAGCAGActgtgggaggagacagaaaaGTACCTGAGCCCCGGGGGCCGGCCTGGACTTCCTGCTGAACACGCGTGCTCCCGTGCTCCAGAGAGTTCCTCCATAGGGATTTTGGGATGGTGTCTGTTCCTGCTTTTCTGTCCTGGGCTGGGGATCCAGGCTCAGCACTTTCTCCCCGTCCCCACTATGGCTATGGCCACTAAAGCTTTAGACTCAGCCTGTGTCCCTGCACAGCAATTCTCTCTGCTGACTCCAGCTGCctggacccccacccccacccccacccaggccttcctttgttttttttcggGGGCCAGTTTTCTCACTTGACCTCCTGGGATATCCAAGACACAGGTTCAAGGCCCCAACCCCTGACACCCAAAGCTTCTTTTGAAAAGTTCAGGGACCTTCTTGGGGGTCGGTGGGGAGAGCGGAGACATTAAGTGCCCCTGCCAGGACCTGCCCTTCCCTTCAGGATGCTAAGTTTTTGCTTTGACCCTCCCAAGGGGGGAGCTCTTGGTGACGCTCCCTCCCTCTCACATCACTCCACACTGGCCCATCTGCTCTGCAGAAGCGTTCTGGCTCACCCCTCTGGTGTGTGGTGAGGggctttcttctccccctcctgtTTGACTCCCACCACCTCCTGCACATGggtttgggggcgggggtgggggactgAAAGGGAAGTCCCCTCAGAGAGTCTTATTATCAACACTTTATTTTTTGGTtattggcttttcttttctttttttgtttttgtatagaccaaagcaaagaaaataaaataacacagagATCCAATGGAGGCTGTTAAAAGCATTATGGTGTAGAGGAAGTAAGGGGCATGCGTAATAGGTGTGACAGACCTCTCCGTCCCTGATGTCCCCACTTGGCTGATCCTTGCGTGTCCTCAGGGTTGCAGAGGCAAATGAAGAGGAGGGAGGGTTTGAAGAGCAGGAGTCCATTGAATGATTTGGTCCCATGTTCACACAGAACAGGGACACTGGATAGGGGACCTGTAGGATAGCTCCTGCTGTAGGGACTCCAGGCTGTCTTGCTCCACAGGCAAGCTCCTTGCTGGCTTCAGCCTCTGCTGTCCTGCTGTGACATCAGACCGTCTTCTATACCTCAGCTCTCCATGGCCCTCGGCTTACTAATACAGGCTTCTTGTTGGCCAGAAGTTGGCCCACCCCAGCCCCTGTCCACCTCTCCCTCATGACTCCTTACTGCTTGCAAGTCAGTAACACTAATGCTGGCCAGCATCTTCTGCACGCTATCATGCCTCCTGCTCAGGTTGTCCCCTCTACCTTTTCTTGCTGGCCCATGCCATCTGTCTCAACCTTGCCCCAGGAGCACTGATCCTGGGCTATTCCTGGCACCAACGGATGCTGTCACTGGACACAGATATCTTTTTGCCTAGTCCATGTGACGCTTCCCCACCAGCAACGCTAAGTTCTTCTTTTTGAAGTGGGCTGGTCATCACGGTCCTGACAAACTCTGAGAACAGGAAATTCCTGTAGCCTGCCCGTGTGGAGCCAGACATCTGCCTCTTATACCTGCACGGAGCCCAGGCTAGGACTTGAGCGTCACAGTGCATCAGGGTAACACCCTGCTTCCCTGCAGCCAATCACATTTGAGGATGAAATGGGAAAAAACGGGGtcgaggaagaaagaaaaggtccagggtggaggcaggaagttAGTTCAATCAAAAGATGACTGGGCCTTCAGGCAGAGGTGATGAGAGACAGCTGAGTGCCACAGGAGCCAccatgggagggagaggagactcGGCATACAGAGACCACAAGGTCTTTATTTAACTGCCCCCATTTTCAGGGCCTGGCTGAATGCTCAGCCTGGGTAGTTTGAAAAGAATTTGATAAAGGAAGAGCATAGgactctgtgagtgtgtgtgggaagCAGCAAGGGGGAGACAGCACATGAGCCCGAGGTGGTGAGAGAAGATGCTAGCCAGGTGTGGAGGATACAGTAGGATTCTGCATCTGCGGCTGATGCTCCAGACAGGCAGGCTGGGTCCTCACTGCCAACCACTGATGCTCACCGATCACTGAACTCAAGTAGAAACTGTAGAGTGCGCTTATGTTATCTCTAGCTGCCCAGCCCGGAGCAGAGTGATCTAGAGATGCCAAGGAAAACAGCAAGACGTCTCCCCACCCCAGAAGAGGAGGTGGCAATCGCATTGTGTATCCCCATGACAGGCAGCAAGGGCAAGGGATCAGAGAAGGAAGTAAAACTGTCACAGAAAGATTGAAAGTTGATTCTAGCCGTGGCGGAGCTGGAGCTCTGAGCTTCCCAGCAGGCTGGCCAAAAAGGGCGCATTAATCTCTGTGGCATCGATGGTCCATTTCTGTTCTTATGTAGGAGCTATCCGCAACCCCGAGAAAGCCCACACTTGGAACCCTGATTTCCTTATCTATAAAATAGGGCTGTCATGTAGCACAGGATAGATCATGAGTTTGGTTTGTGCCCAGGCTTTTGGGGTCCTCACACTCAGGACGAACCACGTCCGGCCCATCTGCTTAGTGTCAGGATATAACGAG