Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name UBXN2A
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name UBX domain protein 2A
Also known as UBXD4
Coordinate chr2:23927172-24004909
Strand +
Gene summary Predicted to enable ubiquitin binding activity. Predicted to be involved in several processes, including autophagosome assembly; nuclear membrane reassembly; and proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within cellular response to leukemia inhibitory factor; regulation of gene expression; and regulation of protein metabolic process. Predicted to be located in cis-Golgi network and endoplasmic reticulum. Predicted to be active in cytosol and nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from UBXN2A

Retroname Coord Strand Genomic Region ENSG
UBXN2AP4 chr19:9347724-9348886 - Intragenic
 ENSG00000270614 UCSC
UBXN2AP1 chr4:68615519-68616225 - Intergenic
 ENSG00000251101 UCSC
UBXN2AP2 chr5:20830398-20830641 - Intergenic
 ENSG00000248308 UCSC
UBXN2AP3 chr5:34373333-34373577 + Intergenic
 ENSG00000249380 UCSC

Expression

Transcript Sequences

>NM_181713.4
gcTTGGGCGCCTGGCGAAGACCGAGAGAGGCTGGCGGGATCTCAGCGGCGCGGCCGCGGAACCTGAGGCGGTCTGGGGCGGCGGCGCTCCGGCTCTGAAGGGCTCCAGCCAAACGGAGCCCGCGGCCAAACGGTGCCTGCGGTGCCTGAGCTGAGTGAGGCCGAGGCCGGGAGGCCGTGCCCGGAGTAAGGCGAAAGAGAATGAAAGACGTAGATAACCTCAAAAGTATAAAAGAAGAATGGGTTTGTGAAACAGGATCTGATAATCAACCTCTTGGTAATAATCAACAATCAAATTGTGAATATTTTGTTGATAGCCTTTTTGAGGAAGCTCAGAAGGTTAGTTCCAAATGTGTGTCTCCCGCTGAACAGAAGAAACAGGTAGATGTAAATATAAAATTATGGAAAAACGGATTCACCGTCAACGACGATTTCAGAAGTTATTCCGATGGTGCCAGTCAGCAGTTTTTGAACTCCATCAAAAAGGGGGAATTACCTTCAGAATTACAGGGAATTTTTGATAAAGAAGAGGTGGACGTTAAAGTTGAAGACAAGAAAAATGAAATATGTTTGTCTACGAAGCCTGTGTTCCAGCCCTTTTCAGGACAGGGTCACAGACTAGGAAGTGCCACACCAAAAATTGTTTCTAAAGCAAAGAATATTGAAGTTGAAAATAAAAATAATTTGTCTGCTGTTCCACTGAACAACTTGGAACCCATTACTAATATACAGATCTGGTTGGCCAATGGAAAAAGGATTGTCCAGAAATTTAACATTACTCATAGAGTAAGCCATATCAAAGACTTCATTGAAAAATACCAAGGATCTCAAAGAAGTCCTCCGTTTTCCCTGGCAACAGCTCTTCCTGTCCTCAGGTTGCTAGATGAGACACTCACACTGGAAGAAGCAGATTTACAGAATGCTGTCATCATTCAGAGACTCCAAAAAACTGCATCTTTTAGAGAACTTTCAGAGCACTGATTTTTGATAGACTAAGTGGAAAATTTGCAGAGAAATGATGGTTGTAAGTGGACATGCAAACCAAAATTGGGGATTGGAGAAGTCAGACTCACTAGACTTTTGGTTCGAGTACTATTGAACTCTCTCCTGATGAGAAGATGTTTAGATAAGTACAAGTTAAGAAAGTAGCATATGACTGGAAACTATATTCAGTGCACTTTCTCCAAAAGACTACCCAGAAAAATAGACTTATTTTCAAATACCAGTTATCAAGATATATTAAATAGCTGTATTGTTTAGAATCTTAATATGGTATAAATTAGCATATGTATTCACAATATTCATTCAGACATCATTCCCAGACAGCAGGGATTTATTTAAATGTTAGCTGTCTGAGTTTTTAAATAGCTAATACgaccgggtacagtggttcatgcctgtaatcccagaacttcgggaggccgagacaggcagatcacgaggtcaacagattgagaccatcctggcaaacatggtgaaaccccatctctagtaaaaatacaaaaattagctgggcgtggcggtgcgcaactgtagtcccagctactcgggaggctgaggcaggagaatctcttgaacctggcaagtgtaggttgcagtgagctgagattgagcaactgtactccagcttggcgacagagcaagaccccctctcaaaaataaataaaataaagtaaaataaatataaataaTTGTggccgggtgcaatggctcatgcctgtaatcccagcactttgggaggctgagatgggaggatcacttgaagccaggagtttaaaaccagaatgatcaacagagtgagacccctgtctatataTTTTTTTAATTTAAAAAATAAAAGAATAAAATTGTGTAGCTCAGTATAGTATCAAGATTAATCTGCCTACTCACATTTCTACACTTTATAAAAATGTAATAAAAGAAAATTATCTTTCTAAAAAGCCTATTCCCTTTCCATTTTATTTTCTTTCAAAAATTATGGATTTGTTTTTGGCTAACATTTGGGATTAGCCATTCATTTGCCACCACTCACTTAGAATATAATGCCGGTGTGTGTCACATTACTAGTATTTTTTAAATGCATCATATAAAGTATGGttttctgtttctttttcgtttgtttgagatggagtttcgctcttgttgcccaggctggagtgcagtggcgcaatctcagctcaccacaacctccacctcccgggttcaagagattctcctgctcagcctcccaagtagctgggattacaggcatgcgccaccatgcttggctaattttgcatttttagtagacacgggatttcaccatgttggtcaggctggtctcgaactcccgacctcaggggatctgcctgcctaggcctcctgaagtgctgggattacaagtgtgaaccaccgtgcccagcTGGTTTTCTGTTTCATACATCAGAGTCAACTTGTGAATACATTTAAAGATTATTTCATTTTGATATCACGAAGAAAAACAGGCTTTATATCTCAGACTTTAACTAAATCCAGTTAGACCTCAATTTTTCACTGTCAGATTAAATCCCCATACCTGAAAATAAGTTTAACATTTTTTTTTGCAAATGATCTATTGAATCAGATTTAAAATGAAGCATGCATTGAGTGTGCCAAGGAACTAAGTGGTCCATAGCAGCAGTAATGTTCATAGGGTGCGAGATGCCTGCTATGAAACAGCAACTCTCAAACATTTTTATCTCAAGACCATTTGTTTATGTGAGCTATATATATTATTATATTAAATATTAAATTTTTAAAATATTTATTTATGggccaggcacggtggcttacgcctgtaatcccagcactttgggaggctgaggcaggcggatcacaaggtcaagtgattgagaccatcctgtccaacatggtgaatccccgtctctactaaaaatacaaaaaaaattagctgggtgtggtggcatgcgcctgtagtcccagctacgtgggaggctgagggaggagaatggcttgaacccgggaggtggaggtttcagtgagccgagattgcgcccctgcactccagcctggtgacggagcgagactctttctcaaaaaaaaaaaaTTATTCATTTAAAAATAACTTCTggctggacatggtgtctcacgcctgtaatcctagcactttgggaggccaagacaggtggatcacttgagcccaggagtttgagaccagcctgggcaacaaggcaaaactctatctataaaaattacaaaaattagtgcagtagctcacacctgtaatcccagcactttgggacactaaagcgggcagatcacctgaggtcaggagttcgagaccagcctggtcaatgtggtgaaaccatgtctgtactaaaaatacaaaaattagcctggtgtggtggcacatgcctgtaatctcagctactagggaggctgagggaggagaattgcttgaactcaggaggcagaggttgcagtgagccgagattgcgccactgcactctagcttaggcaacagagtaagaccctgCCGTAATAATAATAACttttttttttttgagatagagttttgctctttcccccagactagagtgcaatggcgcgatcttggctcactgcaacttgtccccccgggttcaagcgattcttctgccacagcctcccgagtagctgggattataggcgcccactaccacgcctggctaatttttgtatttttagtagagacggggtttcgccatgttggcctggctggcctctaactcgtaacctcaggtgatccgcccgccttggcctcccaaagtgctaggattataggcgtgagccactgtgcccagccaataataacttataaaacatgaaacgatttagtgagaaaagtggccggttttttggggggaattactttctgtcataaagaagatagatgggttctcatgtcttctacattcagtctgttgtgcagtcacatatcatgtagactctggaaaacacctctgtatactggtgaaagaatgaaaagaagcaaataatgccttagtatgattatgaaaaacgttttgacttcacagtgccctgaatgggtcttgggaatctccagggatccctcaggcacactttgagaaccAATCTATATAAAGTGATGGTTCAcaatgattctgaagccttagtttcagaatcatttggggcagcttttcaaaaatgccattcctgccacctaccacaaagattctgattcactgtatctgtgatgggtctcagatctctgcatttttaatctcacgtgattctTAAGTATGTGGTGGAAGTACCTTTCTTCAGGAAATTCTGTCCTAAGCTTTTACCCTGAGAAAATAAAACCTGCATGCTTTCACCATGGACGGTGGGAGACTCCACTGAAACACATCTGCTAGACCACTAAGTTTATCCTTGTCACCCAGTTTGCTCTTGGAAAGAGTCTGTtcccttttgtcactgaaccaatcatgacataaacttgtgctttacctcctatagcacagccgagacaaggctggaacatttaattaaggtttttactaaggactcaggaataacaacagggaaataTCTATGTAACTAGATGACCTGACATAAAATCTATCTTCTGATTGCAGTCTATTGTGAGAATGCTGCTTTTCCTAGCTCCCAGCCTTCCATGGGGCAGAAGGCTCTTTTAATTAGGAAGAGAGGGAGGACAAAGGAGAGCCTTTTCTTTTGTCCATTACTCTTAGAAATGAACAGGTACATAATAGAAAATAAATAATTATTGTTGGTAATGTTTACACAGCAGTGTTAGAGCCTCTCTGTAGTGAAACAAAAATAATGTTCTTACCaaaaaaaaaaaaaaaaaaaaGAGGCAATGATAAAATCAATGAGCTTATCTTTCTGATATAGAAAATAACAGGATGACAGTTAATACATGTTCAGGAATCTAAGAAAATGTTTCATATAGGCCTATCATGTAGCATTTTTATTTGCATAATTATAGTCAACATATGATTCTCCATGTAGGGGTCTCTCATTGAGAATGTTTCCTGTGTACCTATAGAAAAGCCTCTTTGGTAGATTTTCCGGTTTATAATTATTTAACCAGAAGATACATGGGAGGTTCTTTTGTATGTACCTGTAGAATACATCCCAGTAAGGGTCCTATGGAGAAAGACCTGTTGTCATCAATAACCTTCATTATTCTAACTGTGAAACGTTCATTAATGCGAATAATATCCTCAAAGATTTTCTACAATGAGAATCATCCAGTAAAGCTTTTTAACTGAGAATTTAAAAGTTGTAAAATTGTTAGTTAAATGTGTATAATTATCAAAAGAGGTTGACTTTGGAAAACAAACAATTTGCTAAGGGAAGGAAAACTTGAAAATAATCACCTTAGATGGGGCATACAATTTGACCTAAGCAATTGTTTCAAAACTGTCTTCAGTTTCTTGAAAATAATTGTTAGGGCTGATATATAGAAATACATATCTAggccaggcacggtgactcatgcctgcaatcccagcactttgggaggctgaggtggatggatcacgaggtcaagagatcgagaccatcctggtcaacatggggaaaccccgtctatactaaaaatacaaaaattagctgggtgtagtggtgtgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacctgagccccggaggcagaggttgcagtgagccgagatcgtgccactgcactccagcctgggcaacagagcgagactccgtctcaaaaaaaagaaaaaaagaaaTACATATCTAATGTTACAGATTGTGGTTTATTGGTTAATTACTATGCATTTTTTTCAGTTTAAAAAATAATCTTATTTTATATACTTCTCTCGGTATAATTTTTCATGACATTTCAGCATGTTGATAATATGTGTGCATCTATTTCAGTGCCTTAAAGTATTTTGAGAGCAATCTTTTGCTGACAGTTGAAGAACTGTTAATGAAATACTGTTCATTAAAAGGATCTGTGAAATCA