Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Kpna2
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name karyopherin (importin) alpha 2
Also known as 2410044B12Rik|IPOA1|PTAC58|Rch1
Coordinate chr11:106879455-106890351
Strand -
Gene summary Enables DNA-binding transcription factor binding activity and nuclear import signal receptor activity. Acts upstream of or within entry of viral genome into host nucleus through nuclear pore complex via importin; positive regulation of viral life cycle; and protein import into nucleus. Located in cytoplasmic stress granule. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Orthologous to human KPNA2 (karyopherin subunit alpha 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Kpna2

Retroname Coord Strand Genomic Region ENSG
Kpna2P1 chr1:87950002-87951933 + Intergenic
ENSMUSG00000084021 UCSC
Kpna2P7 chr17:47931535-47933392 - Intragenic
Intragenic
ENSMUSG00000083672 UCSC
Kpna2P2 chr2:12087169-12088934 - Intergenic
ENSMUSG00000080801 UCSC
Kpna2P4 chr3:25264927-25266895 - Intergenic
ENSMUSG00000069083 UCSC
Kpna2P3 chr3:111228399-111230301 - Intergenic
ENSMUSG00000106100 UCSC
Kpna2P5 chr4:10853713-10855694 + Intergenic
ENSMUSG00000083220 UCSC
Kpna2P6 chr6:121685600-121686010 - Intergenic
ENSMUSG00000107998 UCSC
Kpna2P10 chrX:57675296-57678227 - Intergenic
ENSMUSG00000081373 UCSC
Kpna2P9 chrX:108953706-108955632 + Intergenic
ENSMUSG00000083928 UCSC
Kpna2P8 chr17:90215902-90217870 - Intergenic
ENSMUSG00000066878 UCSC

Expression

Transcript Sequences

>NM_010655.3
AATCAGCCAATCGGAACGCGGCGTCACCGGGAAATTTAAATCGCGCCGGCCGGCAGCACGAGGCACAAAATCTGAGGGCTGAAGGGTAGCAGACGTTTCCACAGCCGCCGACCCGCAGCTTGAGTGTCCTGCACCACCTTTCGTGGAAATCTGAGCCGGCTGTACAGCTTTCCTCCTTGTTCCTGCAGCCATGTCCACGAACGAGAATGCTAACTTACCAGCTGCCCGACTTAACAGGTTCAAGAACAAGGGGAAGGACAGCACAGAAATGCGTCGCCGCCGAATAGAAGTTAATGTGGAACTCAGGAAAGCTAAAAAAGATGAGCAGATGCTGAAAAGAAGAAACGTCAGCTCCTTTCCTGATGATGCTACTTCTCCGCTACAGGAAAACCGGAACAACCAGGGTACTGTAAATTGGTCTGTTGAGGACATTGTTAAAGGCATAAACAGTAACAATTTGGAAAGCCAGCTCCAAGCTACTCAAGCTGCTCGgaaaTTGCTTTCTAGAGAGAAACAGCCTCCTATAGACAACATCATCCGGGCTGGTTTGATCCCAAAATTTGTGTCCTTCTTGGGCAAAACTGATTGTAGTCCTATTCAGTTTGAGTCTGCTTGGGCACTCACCAACATTGCTTCTGGAACATCTGAACAGACCAAAGCTGTGGTGGATGGAGGTGCTATCCCAGCGTTTATTTCTCTCTTGGCATCTCCTCATGCTCACATCAGCGAGCAAGCTGTTTGGGCTCTTGGAAACATTGCAGGTGATGGTTCAGCTTTCCGAGACTTAGTTATCAAACACGGTGCGATTGACCCACTGTTGGCACTTCTTGCAGTTCCCGATCTGTCTACCTTGGCATGTGGTTACTTACGTAATCTTACCTGGACACTTTCAAACCTTTGTCGAAACAAGAACCCTGCACCTCCCTTAGACGCCGTTGAGCAGATTCTTCCTACGTTAGTTCGACTCCTGCACCACAATGATCCAGAAGTATTGGCAGATTCCTGCTGGGCCATTTCCTACCTGACTGATGGTCCAAATGAGCGCATTGAGATGGTTGTGAAGAAAGGAGTTGTTCCCCAACTTGTGAAGCTTCTAGGAGCTACTGAACTGCCCATTGTGacTCCCGCACTAAGAGCCATAGGGAATATTGTCACTGGAACAGATGAGCAGACTCAGAAAGTGATCGATGCAGGAGCACTTGCAGTCTTTCCCAGCCTGCTAACAAACCCCAAAACTAATATTCAGAAGGAGGCCACATGGACAATGTCGAACATTACAGCTGGACGCCAGGACCAGATACAGCAAGTTGTGAATCACGGCCTAGTCCCCTTTCTTGTTGGTGTCCTCTCTAAGGCGGACTTTAAGACACAGAAGGAGGCCGCGTGGGCTATAACCAACTATACCAGCGGTGGGACTGTTGAGCAGATTGTGTATCTCGTTCACTGTGGGATAATAGAACCTTTGATGAACCTCCTGAGTGCAAAAGATACCAAGATTATTCAGGTTATTCTTGACGCCATTTCAAATATCTTTCAGgctgcaGAGAAACTAGGTGAGACAGAAAAGCTCAGTATAATGATTGAAGAGTGTGGAGGCTTGGATAAAATTGAAGCACTACAGAGGCATGAAAACGAGTCTGTATACAAGGCCTCATTGAACTTAATTGAGAAGTACTTCTCAGTGGAGGAAgaggaagatcaaaatgtggtGCCAGAAACTACCTCTGAAGGCTTCGCCTTCCAAGTTCAGGATGGAGCTCCTGGGACCTTTAACTTCTAATGTCCAGCTAAGGCACAAAGTTGTTAGCTATGTGCTGTGCTATTCTGTGTTCTCATAGATTTGTCTTACTGTTTCTCTACTAAGAACTCTTTTTAAATGTGGTTTGTTATTGTAGCACTTTTTACAAAAGAAACTATACTTGAACAGTTATAAACTGTACATACTCTatgaagctgtcctctgaattTATTTCTATGTGGAATTTCGTACCCTGTCATGTCCTGTAAATAAAGATTAAAGTTCCATTCTTTACTCTGA