Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ldha
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name lactate dehydrogenase A
Also known as Ldh1|Ldhm|l7R2
Coordinate chr7:46491698-46505051
Strand +
Gene summary The protein encoded by this gene catalyzes the conversion of L-lactate and NAD to pyruvate and NADH in the final step of anaerobic glycolysis. The protein is found predominantly in muscle tissue and belongs to the lactate dehydrogenase family. Mutations in this gene have been linked to hemolytic anemia and early postimplantation death in mice. Multiple transcript variants encoding different isoforms have been found for this gene. The mouse genome contains multiple pseudogenes of this gene. [provided by RefSeq, May 2013]

Retrocopy(s) from Ldha

Retroname Coord Strand Genomic Region ENSG
LdhaP21 chr15:36299768-36300583 + Intergenic
ENSMUSG00000115162 UCSC
LdhaP22 chr15:37181361-37182949 - Intergenic
ENSMUSG00000115621 UCSC
LdhaP25 chr17:41411904-41413241 + Intergenic
ENSMUSG00000117062 UCSC
LdhaP7 chr2:59964398-59965800 + Intragenic
ENSMUSG00000082330 UCSC
LdhaP8 chr2:99385648-99386702 + Intergenic
ENSMUSG00000084313 UCSC
LdhaP9 chr3:95712704-95713283 + Intragenic
ENSMUSG00000105093 UCSC
LdhaP28 chrX:111877407-111877724 + Intergenic
ENSMUSG00000082392 UCSC
LdhaP14 chr7:53544699-53545161 + Intergenic
N/A UCSC
LdhaP2 chr1:57330363-57331599 - Intergenic
ENSMUSG00000101129 UCSC
LdhaP1 chr1:145040614-145041716 - Intergenic
ENSMUSG00000099617 UCSC
LdhaP16 chr10:29657303-29658473 + Intergenic
ENSMUSG00000111427 UCSC
LdhaP17 chr11:6635803-6636740 + Intergenic
ENSMUSG00000083075 UCSC
LdhaP18 chr13:16387677-16388351 - Intergenic
ENSMUSG00000112962 UCSC
LdhaP19 chr13:83980359-83981929 + Intergenic
ENSMUSG00000114687 UCSC
LdhaP20 chr14:93431658-93433230 - Intragenic
ENSMUSG00000115505 UCSC
LdhaP23 chr16:23015866-23016154 - Intergenic
ENSMUSG00000081988 UCSC
LdhaP24 chr16:44620568-44622044 - Intergenic
ENSMUSG00000116827 UCSC
LdhaP26 chr17:75968203-75969431 + Intergenic
ENSMUSG00000117540 UCSC
LdhaP27 chr18:19498544-19504881 - Intergenic
ENSMUSG00000117636 UCSC
LdhaP4 chr2:14725908-14727404 + Intragenic
ENSMUSG00000083305 UCSC
LdhaP5 chr2:15401471-15403002 + Intergenic
ENSMUSG00000082632 UCSC
LdhaP6 chr2:59228864-59230085 - Intergenic
ENSMUSG00000080982 UCSC
LdhaP3 chr2:110039063-110040612 - Intergenic
ENSMUSG00000082512 UCSC
LdhaP10 chr4:10438341-10439834 - Intergenic
ENSMUSG00000084215 UCSC
LdhaP11 chr4:119191117-119192739 - Intragenic
ENSMUSG00000083836 UCSC
LdhaP12 chr5:106363472-106365131 + Intergenic
ENSMUSG00000105600 UCSC
LdhaP13 chr6:145260866-145262438 - Intergenic
ENSMUSG00000083962 UCSC
LdhaP15 chr8:81497224-81498771 + Intragenic
ENSMUSG00000109584 UCSC
LdhaP30 chrX:42799493-42799734 + Intergenic
ENSMUSG00000081856 UCSC
LdhaP31 chrX:63793889-63794895 - Intragenic
ENSMUSG00000082269 UCSC
LdhaP29 chrX:116573118-116574675 - Intergenic
ENSMUSG00000083602 UCSC

Expression

Transcript Sequences

>NM_001136069.2
GGGTtcttgcgggggtgggggggttaggAAGGAAGCTTGCGCGTGCGCAGGCTTAAGCACGTTGCTATGCCTTGGGGTCGCACCTTGTGGCCGTTATTGGCGCCCTCTGCTCTTGATTTTTGGTACTTCCTGGAGCAACTTGGCGCTCTACTTGCTGTAGGGCTCTGGGTGATGGGAGAAGAGCGGGAGGGCAGCTTTCTAACCATATAAGAGGAGATACCATCCCCTTTTGGGGTTCATCAAGATGAGTAAGTCCTCAGGCGGCTACACGTACACGGAGACCTCGGtattatttttccatttcaaGGTCTCAAAAGATTCAAAGTCCAAGATGGCAACCCTCAAGGACCAGCTGATTGTGAATCTTCTTAAGGAAGAGCAGGCTCCCCAGAACAAGATTACAGTTGTTGGGGTTGGTGCTGTTGGCATGGCTTGTGCCATCAGTATCTTAATGAAGGACTTGGCGGATGAGCTTGCCCTTGTTGACGTCATGGAAGACAAACTCAAGGGCGAGATGATGGATCTCCAGCATGGCAGCCTCTTCCTTAAAACACCAAAAATTGTCTCCAGCAAAGACTACTGTGTAACTGCGAACTCCAAGCTGGTCATTATCACCGCGGGGGCCCGTCAGCAAGAGGGGGAGAGCCGGCTCAACCTGGTCCAGCGAAACGTGAACATCTTCAAGTTCATCATTCCCAACATTGTCAAGTACAGTCCACACTGCAAGCTGCTGATCGTCTCCAATCCAGTGGATATCTTGACCTACGTGGCTTGGAAAATCAGTGGCTTTCCCAAAAACCGAGTAATTGGAAGTGGTTGCAATCTGGATTCAGCGCGGTTCCGTTACCTGATGGGAGAGAGGCTGGGGGTTCACGCGCTGAGCTGTCACGGCTGGGTCCTGGGAGAACATGGCGACTCCAGTGTGCCTGTGTGGAGTGGTGTGAATGTTGCCGGCGTCTCCCTGAAGTCTCTTAACCCAGAACTGGGCACTGACGCAGACAAGGAGCAGTGGAAGGAGGTTCACAAGCAGGTGGTGGACAGTGCCTACGAGGTGATCAAGCTGAAAGGTTACACATCCTGGGCCATTGGCCTCTCTGTGGCAGACTTGGCTGAGAGCATAATGAAGAACCTTAGGCGGGTGCATCCCATTTCCACCATGATTAAGGGTCTCTATGGAATCAATGAGGATGTCTTCCTCAGTGTCCCATGTATCCTGGGACAAAATGGAATCTCGGATGTTGTGAAGGTGACACTGACTCCTGAGGAAGAGGCCCGCCTGAAGAAGAGCGCAGACACCCTCTGGGGAATCCAGAAGGAGCTGCAGTTCTAAAGTCTTCCCCGTGTCCTAGCACTTCACTGTCCAGGCTGCAGCAGGGCTTCTAGGCAGACCACACCCTTCTCGTCTGAGCTGTGGTTAGTACAGTGGTGTTGAGATGGTGTGGGGAAACATCTCACTCCCCACAGCTCTGCCCTGCTGCCAAGTGGTACTTGTGTAGTGGTGACCTGGTTAGTGTGACAGTCCCACTGTCTCTGAGACACACTGCCAACTGCAGGCTTCGATTACCCCTGTGAGCCTGCTGCATTGCTGCCCTGCACCAAACATGCCTAGGCCGACGAGTTCCCAGTTAAGTCGTATAACCTGGCTCCAGTGTGTACGTCCATGATGCATATCTTGTGCATAAATGTTGTacaggatattttatatattatatgtgtctgTAGTGTGCATTGCAATATTATGTGAGATGTAAGATCTGCATATGGATGATGGAACCAACCACCCAAGTGTCATGCCAAATAAAACCTTGAACAGTGA
>NM_010699.2
GGAGCTTCCATTTAAGGCCCCGCCCGCGTGCTGCTCTGCGTGCTGGAGCCACTGTCGCCGAGCTCGGGCCACGCTGCTTCTCCTCGCCAGTCGCCCCCCCATCGTGCACTAGCGGTCTCAAAAGATTCAAAGTCCAAGATGGCAACCCTCAAGGACCAGCTGATTGTGAATCTTCTTAAGGAAGAGCAGGCTCCCCAGAACAAGATTACAGTTGTTGGGGTTGGTGCTGTTGGCATGGCTTGTGCCATCAGTATCTTAATGAAGGACTTGGCGGATGAGCTTGCCCTTGTTGACGTCATGGAAGACAAACTCAAGGGCGAGATGATGGATCTCCAGCATGGCAGCCTCTTCCTTAAAACACCAAAAATTGTCTCCAGCAAAGACTACTGTGTAACTGCGAACTCCAAGCTGGTCATTATCACCGCGGGGGCCCGTCAGCAAGAGGGGGAGAGCCGGCTCAACCTGGTCCAGCGAAACGTGAACATCTTCAAGTTCATCATTCCCAACATTGTCAAGTACAGTCCACACTGCAAGCTGCTGATCGTCTCCAATCCAGTGGATATCTTGACCTACGTGGCTTGGAAAATCAGTGGCTTTCCCAAAAACCGAGTAATTGGAAGTGGTTGCAATCTGGATTCAGCGCGGTTCCGTTACCTGATGGGAGAGAGGCTGGGGGTTCACGCGCTGAGCTGTCACGGCTGGGTCCTGGGAGAACATGGCGACTCCAGTGTGCCTGTGTGGAGTGGTGTGAATGTTGCCGGCGTCTCCCTGAAGTCTCTTAACCCAGAACTGGGCACTGACGCAGACAAGGAGCAGTGGAAGGAGGTTCACAAGCAGGTGGTGGACAGTGCCTACGAGGTGATCAAGCTGAAAGGTTACACATCCTGGGCCATTGGCCTCTCTGTGGCAGACTTGGCTGAGAGCATAATGAAGAACCTTAGGCGGGTGCATCCCATTTCCACCATGATTAAGGGTCTCTATGGAATCAATGAGGATGTCTTCCTCAGTGTCCCATGTATCCTGGGACAAAATGGAATCTCGGATGTTGTGAAGGTGACACTGACTCCTGAGGAAGAGGCCCGCCTGAAGAAGAGCGCAGACACCCTCTGGGGAATCCAGAAGGAGCTGCAGTTCTAAAGTCTTCCCCGTGTCCTAGCACTTCACTGTCCAGGCTGCAGCAGGGCTTCTAGGCAGACCACACCCTTCTCGTCTGAGCTGTGGTTAGTACAGTGGTGTTGAGATGGTGTGGGGAAACATCTCACTCCCCACAGCTCTGCCCTGCTGCCAAGTGGTACTTGTGTAGTGGTGACCTGGTTAGTGTGACAGTCCCACTGTCTCTGAGACACACTGCCAACTGCAGGCTTCGATTACCCCTGTGAGCCTGCTGCATTGCTGCCCTGCACCAAACATGCCTAGGCCGACGAGTTCCCAGTTAAGTCGTATAACCTGGCTCCAGTGTGTACGTCCATGATGCATATCTTGTGCATAAATGTTGTacaggatattttatatattatatgtgtctgTAGTGTGCATTGCAATATTATGTGAGATGTAAGATCTGCATATGGATGATGGAACCAACCACCCAAGTGTCATGCCAAATAAAACCTTGAACAGTGA