Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ly6e
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name lymphocyte antigen 6 complex, locus E
Also known as Ly67|RIG-E|Sca-2|TSA-1|Tsa1
Coordinate chr15:74826874-74831753
Strand +
Gene summary Enables acetylcholine receptor binding activity and acetylcholine receptor inhibitor activity. Involved in negative regulation of viral entry into host cell. Acts upstream of or within several processes, including epinephrine secretion; norepinephrine metabolic process; and ventricular cardiac muscle tissue morphogenesis. Predicted to be located in membrane. Predicted to be active in plasma membrane. Predicted to be anchored component of membrane. Is expressed in several structures, including alimentary system; extraembryonic component; genitourinary system; immune system; and skeletal musculature. Orthologous to human LY6E (lymphocyte antigen 6 family member E). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ly6e

Retroname Coord Strand Genomic Region ENSG
Ly6eP2 chr12:72667448-72668414 + Intergenic
 ENSMUSG00000113143 UCSC
Ly6eP1 chr11:73280654-73281750 + Intergenic
 ENSMUSG00000108577 UCSC

Expression

Transcript Sequences

>NM_001164036.2
AGATCTGTTCAAACCAGTGCTGCAATGACCTCCTTCCCGAGGAATTTCTGTCCTGCCGCCTCATCCCCAAAAGAGGGATGGCCCAGACGGGCTCAGCCCAGAGGGACCTGACAACCTGAAGGGCGGGTGATGAGGCATCCTTGGTCCAGGACTTCCTCAGCCTTACAGCAGCAGAGATTCCCATGAGCGTTTCAGGATGCAGTCTGTCCCCTCACTCCTTCCGGAAGCAAGCTAAGCCTGCGCACAGGTCTTAGTATCGGTGATTGCCAGAAGCCCTGGCCTTTCCACCCTCCCTAGGTCTGTCCTGAAAGGTAAGGTAGACATGCTACACCAGAAGCCACGCCAGGGCTCTGATGCCACATTGTGTGCGGTGGGGCACTTAGGGCGGTCTCAGCCAGGCTTCTGGGTACCACCGGGGACCGCCGCCGTGGGCGCATAGCTTGGGACCCCTGTCGTAGTCTCAGAGGAGCAGTTGTGCAGCCAAGCCAAGGGCACAGCCGGAGTTGCCAGAGGCCAGCAGCCAGGGTCGTTCTCCCCACCAGCCAGAGACCCGCCCACAGCCCATGAAACGCCCCGCCTGCAGCCCGCCCCCGCCATCTGTGCTCCGCTCCGCCTGCTTGGGTGCATTCAGCCTTTGGTGATCCTCCAGGACCTAAGGTTTCGGTATTATCTTCGGGGCCTCTTCACCCGGAGTAGGCTTCTTTGGCTTGCGAACCTTCAGCAGATGTCTGCCACTTCCAACATGAGAGTCTTCCTGCCTGTGCTGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATGTGCTTCTCATGTACCGATCAGAAGAACAATATAAACTGCCTGTGGCCAGTTTCATGCCAGGAGAAAGACCATTACTGTATCACGTTATCTGCCGCTGCGGGCTTTGGGAATGTCAACCTTGGCTACACCCTGAACAAGGGCTGCTCCCCGATCTGCCCCAGTGAAAATGTCAATCTCAATCTCGGTGTGGCGTCCGTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGGCCTCGGACTTCGTGCCAGTATCCCACTACTGGGCCTTGGACTCCTGCTTAGCTTGTTGGCTCTGCTGCAGCTGAGCCCCTGACCATCCCCCATGTGTTCTCCATATCCCCCCAGCTCAGGAAAAGCCCAGCTCCTTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGTTCCCCCTCCACACTCTCTCAACGTCAGGGCTAAGTACCAAACTCACCCATACCTGCTCTGTTGAAGTGGTACTGGCTACCCTTGCTTCCAGAGCCAATCCTATAACCTCCCTTGGGGAACCAGCGAAGGGGTGAAGATCTCCTTGGAGTCTCAAGAGTACCAGAGTCAGCGCCGAATCTTGTGGACACACTGACAAGGATGTCTAATCCAAATAGATGTATATCTGTGTGCTCAGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTGTGTCGCCACCAAAACCCCTCCCCCTGGTATCATTGTACCCACCTTGTACTCTGTTCAGGAGGCTGCCCATGGAGGACTGCCACCCCTCCAGATGAAGGCTCCCACTACCCGATGCAGTTGAGTCCCATCCTGCCCTCTCTGCCCACACTGGCTTCCTGCTGCTATTCTAGTGCCTCAAATAAACCGTTCACACCCTTTCCTGCTATGTCCTGGTTGTCCTTAACCCGTCTTCCCCCTCCGGTCCAAAGGGACCTGGGGATCCTGCAGGCCCACAGCCCTGCTTAAGCGATTCTGAAAGACCAACCCCGATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAGGTCtctgggaggccagcctggtgcatAGCAAATCCCAGGAATCTAGGCCCATTTAGTGAGACAGGcctgagagaaaagagagagagcaaaggcAGAGAGAACTTGAAAGTGTGCTGTCTCAGGCTGAAAGCTGAGAAGTACAGCTACCCATAAAGGCAGGCCCATCAGGCTGGTCACACATTCCCAAGCTTTGTCTGCCCCAGAGACTTCAGAGGCCTGCTGTTGCCACTTGTCCTTCATAAACTACCCTGTAGTCTAAGCCATGGGAGTCTGGCCCAGGCAAGTGATACTTGTCCACCCTATAActggctttgctttgctttctggtATTTTAAGACGGTCTCGCTATGTTAAGACTAGCTGCCCCAAACCCAGAGCAATCCtctttgagtgctggaattaaaggcatgcaccacca
>NM_001164038.2
AGATCTGTTCAAACCAGTGCTGCAATGACCTCCTTCCCGAGGAATTTCTGTCCTGCCGCCTCATCCCCAAAAGAGGGATGGCCCAGACGGGCTCAGCCCAGAGGGACCTGACAACCTGAAGGGCGGGTGATGAGGCATCCTTGGTCCAGGACTTCCTCAGCCTTACAGCAGCAGAGATTCCCATGAGCGTTTCAGGATGCAGTCTGTCCCCTCACTCCTTCCGGAAGCAAGCTAAGCCTGCGCACAGGTCTTAGTATCGGTGATTGCCAGAAGCCCTGGCCTTTCCACCCTCCCTAGGTCTGTCCTGAAAGCCAGAGACCCGCCCACAGCCCATGAAACGCCCCGCCTGCAGCCCGCCCCCGCCATCTGTGCTCCGCTCCGCCTGCTTGGGTGCATTCAGCCTTTGGTGATCCTCCAGGACCTAAGGTTTCGGTATTATCTTCGGGGCCTCTTCACCCGGAGTAGGCTTCTTTGGCTTGCGAACCTTCAGCAGATGTCTGCCACTTCCAACATGAGAGTCTTCCTGCCTGTGCTGTTGGCAGCCCTTCTGGGCATGGAGCAAGTTCATTCCCTGATGTGCTTCTCATGTACCGATCAGAAGAACAATATAAACTGCCTGTGGCCAGTTTCATGCCAGGAGAAAGACCATTACTGTATCACGTTATCTGCCGCTGCGGGCTTTGGGAATGTCAACCTTGGCTACACCCTGAACAAGGGCTGCTCCCCGATCTGCCCCAGTGAAAATGTCAATCTCAATCTCGGTGTGGCGTCCGTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAACTTCAGCGCAGCTGGCCTCGGACTTCGTGCCAGTATCCCACTACTGGGCCTTGGACTCCTGCTTAGCTTGTTGGCTCTGCTGCAGCTGAGCCCCTGACCATCCCCCATGTGTTCTCCATATCCCCCCAGCTCAGGAAAAGCCCAGCTCCTTTTAGGTCCCAGGGGACCCTAGGAACCTTCAGCTCCTCCTGGGTGTGTCTAGTTCCCCCTCCACACTCTCTCAACGTCAGGGCTAAGTACCAAACTCACCCATACCTGCTCTGTTGAAGTGGTACTGGCTACCCTTGCTTCCAGAGCCAATCCTATAACCTCCCTTGGGGAACCAGCGAAGGGGTGAAGATCTCCTTGGAGTCTCAAGAGTACCAGAGTCAGCGCCGAATCTTGTGGACACACTGACAAGGATGTCTAATCCAAATAGATGTATATCTGTGTGCTCAGTGTATCCCTGTGTGAATGAAGCCACTTGGATTCTGGGGTGGGCAAAGAAGACCTGAAAAGATTCTACAGCAGAAGGCCTGTGTCGCCACCAAAACCCCTCCCCCTGGTATCATTGTACCCACCTTGTACTCTGTTCAGGAGGCTGCCCATGGAGGACTGCCACCCCTCCAGATGAAGGCTCCCACTACCCGATGCAGTTGAGTCCCATCCTGCCCTCTCTGCCCACACTGGCTTCCTGCTGCTATTCTAGTGCCTCAAATAAACCGTTCACACCCTTTCCTGCTATGTCCTGGTTGTCCTTAACCCGTCTTCCCCCTCCGGTCCAAAGGGACCTGGGGATCCTGCAGGCCCACAGCCCTGCTTAAGCGATTCTGAAAGACCAACCCCGATACAGTGATACATTCCTATGATGCCATCATAGCAGAAGCAGAGGTCtctgggaggccagcctggtgcatAGCAAATCCCAGGAATCTAGGCCCATTTAGTGAGACAGGcctgagagaaaagagagagagcaaaggcAGAGAGAACTTGAAAGTGTGCTGTCTCAGGCTGAAAGCTGAGAAGTACAGCTACCCATAAAGGCAGGCCCATCAGGCTGGTCACACATTCCCAAGCTTTGTCTGCCCCAGAGACTTCAGAGGCCTGCTGTTGCCACTTGTCCTTCATAAACTACCCTGTAGTCTAAGCCATGGGAGTCTGGCCCAGGCAAGTGATACTTGTCCACCCTATAActggctttgctttgctttctggtATTTTAAGACGGTCTCGCTATGTTAAGACTAGCTGCCCCAAACCCAGAGCAATCCtctttgagtgctggaattaaaggcatgcaccacca