Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sumo2
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name small ubiquitin-like modifier 2
Also known as SUMO-2|Smt3A|Smt3b|Smt3h2
Coordinate chr11:115413935-115427056
Strand -
Gene summary Enables SUMO transferase activity. Acts upstream of or within positive regulation of transcription by RNA polymerase II and protein sumoylation. Predicted to be located in PML body. Predicted to be active in nucleus. Is expressed in several structures, including branchial arch; central nervous system; eye; heart; and metanephros. Orthologous to human SUMO2 (small ubiquitin like modifier 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sumo2

Retroname Coord Strand Genomic Region ENSG
Sumo2P1 chr1:14909490-14910485 - Intergenic
ENSMUSG00000081201 UCSC
Sumo2P14 chr11:6403142-6404035 + Intergenic
ENSMUSG00000083693 UCSC
Sumo2P15 chr11:74956709-74957674 - Intragenic
ENSMUSG00000085738 UCSC
Sumo2P16 chr11:99730478-99731177 - Intergenic
ENSMUSG00000082531 UCSC
Sumo2P18 chr16:19994883-19995874 - Intragenic
ENSMUSG00000084838 UCSC
Sumo2P19 chr17:74471429-74471596 - Intergenic
ENSMUSG00000117031 UCSC
Sumo2P20 chr18:45418298-45419270 - Intragenic
ENSMUSG00000073569 UCSC
Sumo2P2 chr2:36279034-36280030 + Intergenic
ENSMUSG00000083101 UCSC
Sumo2P3 chr2:80459026-80459982 - Intragenic
ENSMUSG00000086436 UCSC
Sumo2P5 chr4:11133217-11134191 + Intergenic
ENSMUSG00000083025 UCSC
Sumo2P6 chr4:83418745-83419003 - Intergenic
ENSMUSG00000082416 UCSC
Sumo2P4 chr4:104826431-104827422 - Intragenic
ENSMUSG00000083791 UCSC
Sumo2P7 chr5:21419032-21419172 + Intragenic
ENSMUSG00000104920 UCSC
Sumo2P8 chr5:24461711-24462633 + Intergenic
ENSMUSG00000081071 UCSC
Sumo2P9 chr6:98734780-98735663 + Intergenic
ENSMUSG00000107938 UCSC
Sumo2P10 chr7:126997056-126998195 + Intergenic
ENSMUSG00000074184 UCSC
Sumo2P12 chr8:68036968-68037891 - Intragenic
ENSMUSG00000110452 UCSC
Sumo2P21 chrX:7618286-7619431 + Intergenic
ENSMUSG00000082617 UCSC
Sumo2P11 chr7:33697332-33697475 + Intergenic
N/A UCSC
Sumo2P13 chr10:129500857-129501731 + Intergenic
N/A UCSC
Sumo2P17 chr14:21846959-21847696 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_133354.2
GTCCACCGCTGCCGCCTCCTCCTGCCGCTCCTGGTGCTGCTTGTGCGCTCCCTCAGTGCGGACCCGGTGCCTCTTTTGTGAAGCGGCAGCTGAGGAGACTCCGGCGCTCGCCATGGCCGACGAGAAACCCAAGGAAGGAGTCAAGACTGAGAACAACGATCATATTAATTTGAAGGTGGCGGGACAGGATGGTTCTGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCCTATTGTGAACGGCAGGGTTTGTCAATGAGGCAGATCAGATTCCGGTTTGATGGGCAGCCAATCAACGAAACAGACACACCTGCACAGTTGGAAATGGAGGATGAAGATACGATTGATGTGTTCCAGCAGCAGACTGGAGGTGTCTACTAAAAAGGGAGCCTGCTACTTTACTCCAGAATTTTGTTATAGACCAAGAATACATTCTCAATTAGAAAGCCACAATTTGGTCCCACCACATCCTGACTACTACAGTatagttttctctcttctttcatttccCTGTCCCCATTTCTTTATTGTACATAAAGTAACTGGTGTATGTGCACACTCATagtgctctctctttcttttccttttttaaactaAATGACCGATGTTCTGTTCTGGTTGACATGAGATGGAGATGGTCTGGGGAAAAATACTGGGTTTGTGAAAATACCCCCTTCTCCACTAGTGGCATGCTCATTCAGCTCTTATCTTTATATTCCAGTAAGTTATTTTGCTCTCATTGTTTTAACAAAAGAACCCAACAACACCAAATCCTTGCATACCTTGTTCGATTGgagaattttaatgtttttcatttatCATTGTAAAACCAAGGacaattttataacttttttgtACGTAGCTGTTACATGTAGGGCAATCTGTCTTTAAGTAGGGATAAATTACTCTTGAACAAAATGATCCtagatagttttcccttcaagtcAAGCGTCTTGTTGTTTAAATAAACTTCTTGTTT