Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp5mk
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ATP synthase membrane subunit K
Also known as Atp5md|Dapit|Usmg5
Coordinate chr1:266859961-266866753
Strand -
Gene summary Part of mitochondrial proton-transporting ATP synthase complex. Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 6. Orthologous to human ATP5MK (ATP synthase membrane subunit k). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5mk

Retroname Coord Strand Genomic Region ENSG
Usmg5P1 chr3:43640902-43641174 - Intergenic
N/A UCSC
Usmg5P2 chr8:70516924-70517226 + Intergenic
N/A UCSC
Usmg5P3 chr10:43465276-43465585 - Intragenic
N/A UCSC
Usmg5P4 chr10:53990516-53990725 - Intergenic
N/A UCSC
Usmg5P5 chr10:89187161-89187474 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_133544.1
GTGATTCGGACGAAGAAGATTGAAGTCATGGCTGGTCCAGAAAGTGATGGCCAATTCCAGTTCACTGGTATTAAAAAATATTTCAACTCTTATACCCTCACAGGTAGAATGAATTGTGTCCTGGCCACATATGGAGGCATTGCTTTGTTGGTCCTATACTTTAAGTTAAGGCCTAAAAAAACCCCAGCTGTGAAAGCAACATAAATGGATTTTGAAATGTCTGGCCTTATCTGTTAAGTCCCACGCCTGAAGAAGCTGATGTGAACTCATCATGTAATACTCAATTTGTACAATAAATTATGAACCTGGAAAA