Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp5mc2
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ATP synthase membrane subunit c locus 2
Also known as Atp5g2
Coordinate chr7:144264207-144272578
Strand -
Gene summary Enables ligand-gated channel activity. Involved in pore complex assembly; response to 3,3',5-triiodo-L-thyronine; and response to ethanol. Part of cation channel complex. Human ortholog(s) of this gene implicated in renal cell carcinoma and urinary bladder cancer. Orthologous to human ATP5MC2 (ATP synthase membrane subunit c locus 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5mc2

Retroname Coord Strand Genomic Region ENSG
Atp5g2P1 chr1:266244260-266244508 + Intergenic
N/A UCSC
Atp5g2P2 chr2:181295099-181295316 + Intergenic
N/A UCSC
Atp5g2P3 chr2:26085797-26086417 + Intergenic
N/A UCSC
Atp5g2P4 chr3:10594350-10594835 + Intragenic
N/A UCSC
Atp5g2P5 chr3:159989361-159989900 - Intergenic
N/A UCSC
Atp5g2P6 chr5:151569178-151569364 - Intergenic
N/A UCSC
Atp5g2P7 chr5:85760273-85760908 + Intergenic
N/A UCSC
Atp5g2P8 chr9:67120554-67121159 - Intergenic
N/A UCSC
Atp5g2P9 chr9:82253280-82253904 + Intragenic
N/A UCSC
Atp5g2P10 chr13:75165168-75165787 - Intragenic
N/A UCSC
Atp5g2P11 chr14:24047774-24048381 + Intragenic
N/A UCSC
Atp5g2P12 chr17:14279008-14279632 - Intergenic
N/A UCSC
Atp5g2P13 chrX:35032455-35032752 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_133556.2
CTCTACCCTGGGAGCAGCTCTTCTGCCTTTGCCCCTCACCCCTGAAAAATGTATGCCTGCTCCAAGTTCGTCTCTACCCGCTCCCTGATCAGGAGCACCTCTCAGCTGCTGAGCCGTCCGCTCTCTGCAGTGGAGTTAAAGCGACCACAGATGCCCACAGATGAGGGCCTCAGCTGCTTGGCAGTCCGGCGGCCTCTGACCTCGCTTATCCCTAGCCGCAGCTTCCAAACCAGCGCCATTTCAAGGGACATTGACACAGCTGCCAAGTTCATTGGAGCTGGGGCTGCTACAGTTGGGGTGGCCGGTTCTGGAGCAGGAATTGGGACTGTTTTTGGGAGTCTCATCATTGGCTATGCCAGGAACCCCTCTCTGAAGCAGCAACTCTTCTCCTATGCGATTCTGGGCTTCGCCCTCTCTGAGGCCATGGGGCTCTTTTGCCTAATGGTGGCCTTCCTCATCCTCTTCGCCATGTGAAGCAGCTGTCTCCACGTCCACCTCCCATGGTTCTTCCGTGTCTCGTCTGCCCTGTGTGTTCCTTTTCCTGTGCCTCCCCAAGAAGTCTGGGGAAAGTGCTTGGCTCAGGGTTTGACAGAGAGAAGACAAATAAATACTGTATTAATAAGA