Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pabpc1
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name poly(A) binding protein, cytoplasmic 1
Also known as PABP 1|Pabp|Pabp1
Coordinate chr7:75409581-75421874
Strand -
Gene summary Enables mRNA binding activity. Predicted to be involved in gene silencing by RNA; positive regulation of viral genome replication; and regulation of mRNA catabolic process. Located in dendrite. Part of messenger ribonucleoprotein complex. Orthologous to several human genes including PABPC1 (poly(A) binding protein cytoplasmic 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pabpc1

Retroname Coord Strand Genomic Region ENSG
Pabpc1P1 chr1:51619933-51621859 + Intergenic
 N/A UCSC
Pabpc1P2 chr6:106462748-106463950 + Intragenic
 N/A UCSC
Pabpc1P3 chr8:107401129-107401503 - Intergenic
 N/A UCSC
Pabpc1P4 chr16:41605510-41606736 - Intergenic
 N/A UCSC
Pabpc1P5 chr18:32966409-32966552 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_134353.3
CTGCCGCCCGGACCCAGCACCGCCAGCCTCGCTCCCCCGGTTCCACGGCCGTTGAGTACGCGTCGATTCCGGTTGAATTTTGTCCCTCTGCGCTCGCCCCCGCTCCCCTCCCCCCGGCTCCGTCCCCCGGCCCCGCACTCGCTCTCCTCCTCTCACGGGAAAGGTCGCGGCCTGCGGCCCCGCGGGCAGCCGTGCCGAGATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCTCTGTACGTGGGGGACCTGCACCCCGACGTGACCGAGGCGATGCTCTACGAGAAGTTCAGCCCGGCCGGGCCCATCCTCTCCATCCGGGTCTGCAGGGACATGATCACCCGCCGCTCCTTGGGCTACGCGTACGTGAACTTCCAGCAGCCGGCGGACGCGGAACGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAGCCAGTACGCATCATGTGGTCTCAGCGTGATCCATCACTTCGTAAAAGTGGAGTAGGCAACATATTCATTAAAAATTTGGACAAATCCATTGACAATAAAGCACTGTATGATACGTTTTCTGCGTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATGAAAATGGCTCCAAGGGCTATGGATTTGTACATTTTGAAACACAGGAAGCAGCTGAAAGAGCTATTGAAAAAATGAATGGAATGCTTCTAAATGATCGTAAAGTGTTTGTTGGTCGATTTAAATCTCGGAAGGAACGAGAAGCAGAACTTGGAGCAAGGGCAAAGGAGTTCACCAATGTTTACATCAAGAACTTTGGAGAAGACATGGATGATGAGCGTCTTAAGGAACTCTTTGGCAAGTTTGGGCCTGCCTTAAGTGTGAAAGTAATGACAGATGAAAGTGGAAAATCCAAAGGATTTGGATTTGTAAGCTTTGAAAGGCATGAAGATGCGCAGAAAGCTGTGGATGAGATGAATGGGAAGGAGCTCAATGGAAAACAGATTTATGTTGGTCGAGCTCAGAAAAAAGTGGAACGGCAGACGGAACTTAAGCGCAAATTTGAGCAGATGAAGCAAGACAGGATCACCAGATATCAGGGTGTTAACCTTTATGTGAAAAATCTTGATGACGGAATTGATGATGAGCGTCTCCGGAAAGAGTTTTCTCCATTTGGTACAATCACTAGTGCAAAAGTAATGATGGAGGGTGGGCGCAGCAAAGGATTTGGTTTTGTATGTTTCTCCTCCCCTGAAGAAGCCACTAAAGCAGTTACGGAGATGAATGGTAGAATTGTGGCCACCAAGCCACTCTATGTAGCTTTAGCTCAGCGCAAAGAAGAGCGCCAGGCTCACCTCACTAACCAGTATATGCAGAGGATGGCAAGTGTACGAGCTGTGCCCAATCCTGTGATCAACCCCTACCAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATCCCACAGACTCAGAACCGTGCTGCATACTATCCTCCTAGCCAAATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTGCCAGACCTCATCCATTCCAGAATATGCCCGGTGCTATCCGCCCAGCTGCTCCTAGACCACCATTTAGTACGATGAGACCAGCTTCCTCACAGGTTCCACGAGTCATGTCAACACAGCGTGTTGCTAACACATCAACACAGACAATGGGTCCACGTCctgcagctgctgctactgcagccactcctgctgTCCGCACTGTTCCCCAGTATAAATACGCTGCGGGAGTCCGCAATCCCCAGCAACATCTTAATGCACAGCCACAAGTTACCATGCAACAGCCTGCGGTTCATGTGCAAGGTCAAGAACCTTTAACTGCTTCCATGTTGGCATCTGCACCCCCGCAAGAGCAAAAGCAAATGTTGGGTGAACGGCTGTTTCCTCTTATTCAAGCCATGCACCCTTCTCTTGCTGGCAAAATTACTGGCATGCTGTTGGAGATTGATAACTCAGAATTGCTTCACATGCTTGAGTCTCCAGAGTCTCTCCGCTCAAAGGTCGATGAAGCTGTAGCTGTACTACAAGCCCACCAAGCGAAAGAGGCTGCCCAGAAAGCAGTGAACAGTGCCACTGGTGTTCCAACTGTCTAAATTGATCAGGGACCACGAACAGAAACTCGTGCTTCACCGAAGAAAAATATCTTAAACATCGAAAAATTTAAATATTATGA