Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Nsa2
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name NSA2 ribosome biogenesis factor
Also known as Cdk105|Tinp1
Coordinate chr2:27942546-27949089
Strand -
Gene summary Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to be located in nucleolus. Predicted to be part of preribosome, large subunit precursor. Orthologous to human NSA2 (NSA2 ribosome biogenesis factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nsa2

Retroname Coord Strand Genomic Region ENSG
Nsa2P1 chr1:106114333-106115330 - Intragenic
N/A UCSC
Nsa2P2 chr1:167472831-167473607 - Intragenic
N/A UCSC
Nsa2P3 chr2:128532422-128533441 + Intragenic
N/A UCSC
Nsa2P4 chr2:146046461-146047258 + Intergenic
N/A UCSC
Nsa2P5 chr2:166487156-166488187 + Intergenic
N/A UCSC
Nsa2P6 chr2:241009819-241010636 - Intergenic
N/A UCSC
Nsa2P7 chr2:69620262-69620853 - Intragenic
N/A UCSC
Nsa2P8 chr3:127823918-127824916 - Intragenic
N/A UCSC
Nsa2P9 chr3:64190874-64191930 + Intergenic
N/A UCSC
Nsa2P10 chr3:91994525-91995562 - Intragenic
N/A UCSC
Nsa2P11 chr4:11401025-11402486 + Intragenic
N/A UCSC
Nsa2P12 chr4:1853486-1854576 + Intergenic
N/A UCSC
Nsa2P13 chr4:35533420-35534076 + Intergenic
N/A UCSC
Nsa2P14 chr5:101510572-101511567 + Intergenic
N/A UCSC
Nsa2P15 chr5:23149939-23150325 + Intergenic
N/A UCSC
Nsa2P16 chr5:38515676-38520464 + Intergenic
N/A UCSC
Nsa2P17 chr6:12155442-12155776 - Intergenic
N/A UCSC
Nsa2P18 chr6:768682-769648 + Intergenic
N/A UCSC
Nsa2P19 chr7:84385003-84385876 + Intergenic
N/A UCSC
Nsa2P20 chr8:44007590-44008232 + Intergenic
N/A UCSC
Nsa2P21 chr8:440427-441428 - Intragenic
N/A UCSC
Nsa2P22 chr8:94186940-94187945 - Intragenic
N/A UCSC
Nsa2P23 chr9:39592689-39593289 + Intragenic
N/A UCSC
Nsa2P24 chr9:94009413-94010493 - Intragenic
N/A UCSC
Nsa2P25 chr10:99313589-99314554 + Intergenic
N/A UCSC
Nsa2P26 chr11:45460306-45461341 - Intergenic
N/A UCSC
Nsa2P27 chr12:29226101-29226695 + Intragenic
Intragenic
N/A UCSC
Nsa2P28 chr12:29864923-29865517 + Intragenic
N/A UCSC
Nsa2P29 chr13:103445898-103446319 + Intergenic
N/A UCSC
Nsa2P30 chr14:107062237-107063294 + Intergenic
N/A UCSC
Nsa2P31 chr14:50799357-50800310 + Intergenic
N/A UCSC
Nsa2P32 chr14:86395726-86396723 - Intragenic
N/A UCSC
Nsa2P33 chr15:8484133-8485156 + Intergenic
N/A UCSC
Nsa2P34 chr15:98927213-98928268 + Intergenic
N/A UCSC
Nsa2P35 chr16:36875494-36875931 + Intergenic
N/A UCSC
Nsa2P36 chr16:83105483-83105771 - Intragenic
N/A UCSC
Nsa2P37 chr17:64866495-64867459 - Intergenic
N/A UCSC
Nsa2P38 chr18:76037476-76038499 + Intergenic
N/A UCSC
Nsa2P39 chr19:33716632-33717571 + Intergenic
N/A UCSC
Nsa2P40 chr20:32722350-32723120 - Intragenic
N/A UCSC
Nsa2P41 chr20:49184989-49185816 - Intergenic
N/A UCSC
Nsa2P42 chrX:108032828-108033782 - Intergenic
N/A UCSC
Nsa2P43 chrX:115795240-115796080 + Intragenic
N/A UCSC
Nsa2P44 chrX:144394708-144395550 + Intragenic
N/A UCSC
Nsa2P45 chrX:17241587-17242496 + Intergenic
N/A UCSC
Nsa2P46 chrX:3538327-3538919 + Intergenic
N/A UCSC
Nsa2P47 chrX:62743001-62743866 - Intragenic
Intragenic
N/A UCSC
Nsa2P48 chrX:72611552-72612250 + Intergenic
N/A UCSC
Nsa2P49 chrX:73976638-73977634 + Intergenic
N/A UCSC
Nsa2P50 chrX:78681046-78682084 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_134415.2
GGCCTGAGTGAAGCAGGCTCGTGGGCCAGTGGTAACACTGGGATTAAGAAGTTTTTAGAACCCGGGAGGTCGCGGACCGCTGCTTCGCGGCTGTCATCATGCCACAAAATGAATATATTGAATTGCACCGCAAACGATATGGATATCGTTTGGATTACCATGAGAAAAAGAGAAAGAAAGAAGGTCGGGAGGCCCATGAACGTTCAAAGAAAGCAAAAAAAATGATCGGCCTGAAGGCTAAGCTCTACCATAAACAGCGCCATGCCGAGAAAATACAAATGAAAAAGACCATTAAGATGCATGAGAAGAGAAACACCAAGCAGAAGGATGACGAGAAGACTCCACAGGGAGCAGTCCCTGCCTACCTGCTAGACAGAGAGGGGCAGTCAAGAGCAAAAGTACTTTCCAACATGATTAAGCAGAAGCGGAAAGAAAAGGCGGGAAAATGGGAGGTCCCTCTACCCAAAGTTCGTGCCCAAGGAGAAACAGAAGTATTGAAAGTTATTCGAACAGGAAAAAGAAAAAAGAAGGCATGGAAGAGAATGGTTACAAAAGTCTGCTTTGTTGGTGATGGTTTTACAAGAAAACCACCTAAATATGAAAGGTTCATTAGGCCAATGGGTCTACGTTTCAAAAAAGCCCATGTCACACACCCTGAGCTGAAAGCTACCTTTTGCCTGCCTATACTCGGTGTGAAAAAGAACCCCTCCTCCCCGTTATATACAACCCTGGGTGTGATCACCAAAGGGACAGTCATTGAAGTGAATGTAAGCGAGCTGGGCCTTGTGACACAAGGAGGCAAGGTCATTTGGGGAAAGTATGCTCAAGTTACCAACAATCCTGAAAATGATGGGTGCATAAATGCAGTCTTGCTGGTTTGACAGTGACATCATACAAGTCACTCCACTCACTACGGAAGACTACAGTGTCAGGAAAACACCATCGCTGTGATCCTTCTGAACTACCAATCAGCCTTACCCCATGTGCAGTCATCAGGAAGTATTTATTAAACTGTAAAGGAAAATAAAACACTGCCCAATTTACAGTTGGCA